RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 ENHOQ6UWT2 76 aa12.4□□□□□ -0.42
VEGFA-206ENST00000372077 SS18Q15532 418 aa12.39□□□□□ -0.43
VEGFA-206ENST00000372077 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
VEGFA-206ENST00000372077 LINC00526Q96FQ7 95 aa12.39□□□□□ -0.43
VEGFA-206ENST00000372077 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
VEGFA-206ENST00000372077 C9orf129Q5T035 196 aaKnown RBP12.38□□□□□ -0.43
VEGFA-206ENST00000372077 SND1-IT1Q9HBX3 110 aa12.38□□□□□ -0.43
VEGFA-206ENST00000372077 H3BT86 120 aa12.38□□□□□ -0.43
VEGFA-206ENST00000372077 FAM236AA0A1B0GUQ0 79 aa12.37□□□□□ -0.43
VEGFA-206ENST00000372077 FAM236BA0A1B0GV22 79 aa12.37□□□□□ -0.43
VEGFA-206ENST00000372077 A0A1B0GX51 115 aa12.37□□□□□ -0.43
VEGFA-206ENST00000372077 BAALC-AS2P0C853 105 aa12.37□□□□□ -0.43
VEGFA-206ENST00000372077 C3orf22Q8N5N4 141 aa12.37□□□□□ -0.43
VEGFA-206ENST00000372077 A0A087WYN8 130 aa12.36□□□□□ -0.43
VEGFA-206ENST00000372077 IGHV3OR16-9A0A0B4J2B5 98 aa12.36□□□□□ -0.43
VEGFA-206ENST00000372077 COX7A2LO14548 114 aa12.36□□□□□ -0.43
VEGFA-206ENST00000372077 TGP01266 2768 aa12.36□□□□□ -0.43
VEGFA-206ENST00000372077 IGKV2-28A0A075B6P5 120 aa12.35□□□□□ -0.43
VEGFA-206ENST00000372077 IGKV2D-28P01615 120 aa12.35□□□□□ -0.43
VEGFA-206ENST00000372077 CRPP02741 224 aa12.35□□□□□ -0.43
VEGFA-206ENST00000372077 C9orf116Q5BN46 136 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-206ENST00000372077 CHCHD10Q8WYQ3 142 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-206ENST00000372077 IBA57-AS1B1ANH7 110 aa12.34□□□□□ -0.43
VEGFA-206ENST00000372077 TIMM17BO60830 172 aa12.34□□□□□ -0.43
VEGFA-206ENST00000372077 C6orf226Q5I0X4 101 aa12.34□□□□□ -0.43
VEGFA-206ENST00000372077 SMCR5Q8TEV8 140 aa12.34□□□□□ -0.43
VEGFA-206ENST00000372077 C3orf84H3BNL1 204 aa12.33□□□□□ -0.43
VEGFA-206ENST00000372077 CASC10Q5T4H9 136 aa12.33□□□□□ -0.43
VEGFA-206ENST00000372077 CD164L2Q6UWJ8 174 aa12.33□□□□□ -0.43
VEGFA-206ENST00000372077 GAGE2AQ6NT46 116 aa12.33□□□□□ -0.44
VEGFA-206ENST00000372077 SMIM11BQ8TCY0 68 aa12.32□□□□□ -0.44
VEGFA-206ENST00000372077 UQCRQO14949 82 aa12.32□□□□□ -0.44
VEGFA-206ENST00000372077 A0A087WZ39 114 aa12.31□□□□□ -0.44
VEGFA-206ENST00000372077 LINC01600Q96MT4 127 aa12.31□□□□□ -0.44
VEGFA-206ENST00000372077 TRBV7-7A0A0K0K1E9 115 aa12.3□□□□□ -0.44
VEGFA-206ENST00000372077 RPS28P62857 69 aaKnown RBP12.3□□□□□ -0.44
VEGFA-206ENST00000372077 KRTAP26-1Q6PEX3 210 aa12.3□□□□□ -0.44
VEGFA-206ENST00000372077 LINC01561Q8N1V8 128 aa12.3□□□□□ -0.44
VEGFA-206ENST00000372077 LECT2O14960 151 aa12.29□□□□□ -0.44
VEGFA-206ENST00000372077 C4orf26Q17RF5 130 aa12.29□□□□□ -0.44
VEGFA-206ENST00000372077 C14orf132Q9NPU4 83 aa12.29□□□□□ -0.44
VEGFA-206ENST00000372077 VPS13DQ5THJ4 4388 aa12.28□□□□□ -0.44
VEGFA-206ENST00000372077 KRTAP1-5Q9BYS1 174 aa12.28□□□□□ -0.44
VEGFA-206ENST00000372077 C22orf24Q9Y442 160 aa12.28□□□□□ -0.44
VEGFA-206ENST00000372077 LYSTQ99698 3801 aa12.27□□□□□ -0.45
VEGFA-206ENST00000372077 DNAH1Q9P2D7 4330 aa12.27□□□□□ -0.45
VEGFA-206ENST00000372077 HRCT1Q6UXD1 115 aa12.27□□□□□ -0.45
VEGFA-206ENST00000372077 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
VEGFA-206ENST00000372077 NCR3O14931 201 aa12.26□□□□□ -0.45
VEGFA-206ENST00000372077 TENM2Q9NT68 2774 aa12.26□□□□□ -0.45
VEGFA-206ENST00000372077 IGKV2D-24A0A075B6R9 120 aa12.24□□□□□ -0.45
VEGFA-206ENST00000372077 NBDYA0A0U1RRE5 68 aa12.24□□□□□ -0.45
VEGFA-206ENST00000372077 DNAL4O96015 105 aa12.24□□□□□ -0.45
VEGFA-206ENST00000372077 FAM240AA0A1B0GVK7 77 aa12.23□□□□□ -0.45
VEGFA-206ENST00000372077 C6orf223Q8N319 242 aa12.23□□□□□ -0.45
VEGFA-206ENST00000372077 RMI2Q96E14 147 aa12.23□□□□□ -0.45
VEGFA-206ENST00000372077 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.46
VEGFA-206ENST00000372077 MALP21145 153 aa12.21□□□□□ -0.46
VEGFA-206ENST00000372077 IGKV3D-7A0A0C4DH55 119 aa12.2□□□□□ -0.46
VEGFA-206ENST00000372077 IMUPQ9GZP8 106 aa12.2□□□□□ -0.46
VEGFA-206ENST00000372077 LINC00476Q8WZB0 136 aa12.2□□□□□ -0.46
VEGFA-206ENST00000372077 F8WDY8 70 aa12.19□□□□□ -0.46
VEGFA-206ENST00000372077 COX7CP15954 63 aa12.19□□□□□ -0.46
VEGFA-206ENST00000372077 hADV29S1A0JD25 119 aa12.19□□□□□ -0.46
VEGFA-206ENST00000372077 SDIM1Q6ZPB5 146 aa12.19□□□□□ -0.46
VEGFA-206ENST00000372077 DPH3Q96FX2 82 aa12.19□□□□□ -0.46
VEGFA-206ENST00000372077 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
VEGFA-206ENST00000372077 Q8IZM0 81 aa12.18□□□□□ -0.46
VEGFA-206ENST00000372077 Q8NDZ9 215 aa12.18□□□□□ -0.46
VEGFA-206ENST00000372077 LY6G6CO95867 125 aa12.17□□□□□ -0.46
VEGFA-206ENST00000372077 CRYGAP11844 174 aa12.17□□□□□ -0.46
VEGFA-206ENST00000372077 COPS9Q8WXC6 57 aa12.17□□□□□ -0.46
VEGFA-206ENST00000372077 OXTP01178 125 aa12.16□□□□□ -0.46
VEGFA-206ENST00000372077 RPL28P46779 137 aaKnown RBP12.16□□□□□ -0.46
VEGFA-206ENST00000372077 C10orf25Q5T742 122 aa12.16□□□□□ -0.46
VEGFA-206ENST00000372077 Q6ZR54 194 aa12.16□□□□□ -0.46
VEGFA-206ENST00000372077 TRACP01848 142 aa12.15□□□□□ -0.46
VEGFA-206ENST00000372077 CYSTM1Q9H1C7 97 aa12.15□□□□□ -0.46
VEGFA-206ENST00000372077 ALMS1Q8TCU4 4167 aa12.15□□□□□ -0.46
VEGFA-206ENST00000372077 Q5XG85 94 aa12.15□□□□□ -0.46
VEGFA-206ENST00000372077 C15orf56Q8N910 161 aa12.15□□□□□ -0.47
VEGFA-206ENST00000372077 DSCR8Q96T75 97 aa12.15□□□□□ -0.47
VEGFA-206ENST00000372077 A0A087WVE0 104 aa12.14□□□□□ -0.47
VEGFA-206ENST00000372077 LINC00643Q86TS7 51 aa12.14□□□□□ -0.47
VEGFA-206ENST00000372077 M0R2N4 97 aa12.13□□□□□ -0.47
VEGFA-206ENST00000372077 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
VEGFA-206ENST00000372077 SPAG11BQ08648 103 aa12.13□□□□□ -0.47
VEGFA-206ENST00000372077 UNQ6190/PRO20217Q6UXQ8 127 aa12.13□□□□□ -0.47
VEGFA-206ENST00000372077 ACYP1P07311 99 aa12.12□□□□□ -0.47
VEGFA-206ENST00000372077 Q6ZRN7 208 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-206ENST00000372077 CXCL5P42830 114 aa12.1□□□□□ -0.47
VEGFA-206ENST00000372077 DNAH6Q9C0G6 4158 aa12.1□□□□□ -0.47
VEGFA-206ENST00000372077 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-206ENST00000372077 XAGE1AQ9HD64 81 aa12.1□□□□□ -0.47
VEGFA-206ENST00000372077 LINC00846Q9NV44 126 aa12.1□□□□□ -0.47
VEGFA-206ENST00000372077 USP17L23D6RBM5 183 aa12.09□□□□□ -0.47
VEGFA-206ENST00000372077 TMEM258P61165 79 aa12.09□□□□□ -0.47
VEGFA-206ENST00000372077 HIGD2BQ4VC39 106 aa12.09□□□□□ -0.47
VEGFA-206ENST00000372077 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
VEGFA-206ENST00000372077 PSCAO43653 123 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 345.8 ms