RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SCGB1D1O95968 90 aa8.59□□□□□ -1.03
SSR4-202ENST00000370085 SERTAD4-AS1Q5TG53 156 aa8.59□□□□□ -1.03
SSR4-202ENST00000370085 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
SSR4-202ENST00000370085 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
SSR4-202ENST00000370085 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.03
SSR4-202ENST00000370085 ZNF815PA8K554 130 aa8.58□□□□□ -1.04
SSR4-202ENST00000370085 PRR3P79522 188 aaKnown RBP8.58□□□□□ -1.04
SSR4-202ENST00000370085 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
SSR4-202ENST00000370085 KRTAP4-5Q9BYR2 181 aa8.58□□□□□ -1.04
SSR4-202ENST00000370085 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
SSR4-202ENST00000370085 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
SSR4-202ENST00000370085 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
SSR4-202ENST00000370085 PSORS1C2Q9UIG4 136 aa8.56□□□□□ -1.04
SSR4-202ENST00000370085 TMA7Q9Y2S6 64 aaKnown RBP8.56□□□□□ -1.04
SSR4-202ENST00000370085 TIMM17BO60830 172 aa8.55□□□□□ -1.04
SSR4-202ENST00000370085 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
SSR4-202ENST00000370085 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
SSR4-202ENST00000370085 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
SSR4-202ENST00000370085 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
SSR4-202ENST00000370085 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
SSR4-202ENST00000370085 VPREB1P12018 145 aa8.54□□□□□ -1.04
SSR4-202ENST00000370085 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
SSR4-202ENST00000370085 ANKRD39Q53RE8 183 aa8.54□□□□□ -1.04
SSR4-202ENST00000370085 COPS9Q8WXC6 57 aa8.53□□□□□ -1.04
SSR4-202ENST00000370085 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
SSR4-202ENST00000370085 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
SSR4-202ENST00000370085 TMEM238C9JI98 176 aa8.52□□□□□ -1.05
SSR4-202ENST00000370085 M0R378 163 aa8.52□□□□□ -1.05
SSR4-202ENST00000370085 S100A12P80511 92 aa8.52□□□□□ -1.05
SSR4-202ENST00000370085 DAND5Q8N907 189 aa8.52□□□□□ -1.05
SSR4-202ENST00000370085 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
SSR4-202ENST00000370085 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
SSR4-202ENST00000370085 RPL37AP8A6NKH3 93 aa8.5□□□□□ -1.05
SSR4-202ENST00000370085 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
SSR4-202ENST00000370085 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
SSR4-202ENST00000370085 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
SSR4-202ENST00000370085 IGKV2-28A0A075B6P5 120 aa8.49□□□□□ -1.05
SSR4-202ENST00000370085 IGKV2D-28P01615 120 aa8.49□□□□□ -1.05
SSR4-202ENST00000370085 Q6ZVH6 145 aa8.49□□□□□ -1.05
SSR4-202ENST00000370085 NDUFC2O95298 119 aa8.48□□□□□ -1.05
SSR4-202ENST00000370085 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
SSR4-202ENST00000370085 JOSD1Q15040 202 aaPredicted RBP8.48□□□□□ -1.05
SSR4-202ENST00000370085 ADAMTSL4-AS1Q5T5F5 129 aa8.48□□□□□ -1.05
SSR4-202ENST00000370085 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
SSR4-202ENST00000370085 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
SSR4-202ENST00000370085 IGLV1-50A0A075B6I6 118 aa8.47□□□□□ -1.05
SSR4-202ENST00000370085 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
SSR4-202ENST00000370085 NCR3O14931 201 aa8.47□□□□□ -1.05
SSR4-202ENST00000370085 NPC2P61916 151 aa8.47□□□□□ -1.05
SSR4-202ENST00000370085 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
SSR4-202ENST00000370085 DIRC1Q969H9 104 aa8.47□□□□□ -1.05
SSR4-202ENST00000370085 CBY1Q9Y3M2 126 aa8.47□□□□□ -1.05
SSR4-202ENST00000370085 ABCA13Q86UQ4 5058 aa8.47□□□□□ -1.05
SSR4-202ENST00000370085 BCE1O60756 84 aa8.46□□□□□ -1.06
SSR4-202ENST00000370085 IFITM1P13164 125 aa8.46□□□□□ -1.06
SSR4-202ENST00000370085 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
SSR4-202ENST00000370085 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
SSR4-202ENST00000370085 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
SSR4-202ENST00000370085 LITAFQ99732 161 aa8.46□□□□□ -1.06
SSR4-202ENST00000370085 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
SSR4-202ENST00000370085 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.06
SSR4-202ENST00000370085 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
SSR4-202ENST00000370085 HNRNPA3P51991 378 aaKnown RBP8.45□□□□□ -1.06
SSR4-202ENST00000370085 S100A7L2Q5SY68 101 aa8.45□□□□□ -1.06
SSR4-202ENST00000370085 Q8NDZ9 215 aa8.45□□□□□ -1.06
SSR4-202ENST00000370085 OXTP01178 125 aa8.44□□□□□ -1.06
SSR4-202ENST00000370085 UBE2AP49459 152 aa8.44□□□□□ -1.06
SSR4-202ENST00000370085 SRSF9Q13242 221 aaKnown RBP eCLIP8.44□□□□□ -1.06
SSR4-202ENST00000370085 PCLOQ9Y6V0 5065 aa8.43□□□□□ -1.06
SSR4-202ENST00000370085 PRYO14603 147 aa8.43□□□□□ -1.06
SSR4-202ENST00000370085 ZNF861PO60384 105 aa8.43□□□□□ -1.06
SSR4-202ENST00000370085 DDTP30046 118 aa8.43□□□□□ -1.06
SSR4-202ENST00000370085 LINC00518Q8N0U6 118 aa8.43□□□□□ -1.06
SSR4-202ENST00000370085 PPDPFQ9H3Y8 114 aa8.43□□□□□ -1.06
SSR4-202ENST00000370085 PAM16Q9Y3D7 125 aa8.43□□□□□ -1.06
SSR4-202ENST00000370085 J3QL48 77 aa8.42□□□□□ -1.06
SSR4-202ENST00000370085 COX8AP10176 69 aa8.42□□□□□ -1.06
SSR4-202ENST00000370085 SPATA45Q537H7 98 aa8.42□□□□□ -1.06
SSR4-202ENST00000370085 SOSTDC1Q6X4U4 206 aa8.42□□□□□ -1.06
SSR4-202ENST00000370085 TMEM126AQ9H061 195 aa8.42□□□□□ -1.06
SSR4-202ENST00000370085 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
SSR4-202ENST00000370085 KRTAP29-1A8MX34 341 aaPredicted RBP8.41□□□□□ -1.06
SSR4-202ENST00000370085 H0Y9J4 135 aa8.4□□□□□ -1.06
SSR4-202ENST00000370085 DLEU1O43261 78 aa8.4□□□□□ -1.06
SSR4-202ENST00000370085 FAM19A1Q7Z5A9 133 aa8.4□□□□□ -1.06
SSR4-202ENST00000370085 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
SSR4-202ENST00000370085 DMBT1Q9UGM3 2413 aaPredicted RBP8.4□□□□□ -1.07
SSR4-202ENST00000370085 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
SSR4-202ENST00000370085 OR13C6PQ8NH95 151 aa8.39□□□□□ -1.07
SSR4-202ENST00000370085 IGLV6-57P01721 117 aa8.38□□□□□ -1.07
SSR4-202ENST00000370085 HINT1P49773 126 aaPredicted RBP8.38□□□□□ -1.07
SSR4-202ENST00000370085 PYY3Q5JQD4 70 aa8.38□□□□□ -1.07
SSR4-202ENST00000370085 SLC25A34Q6PIV7 304 aa8.38□□□□□ -1.07
SSR4-202ENST00000370085 MUSTN1Q8IVN3 82 aa8.38□□□□□ -1.07
SSR4-202ENST00000370085 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
SSR4-202ENST00000370085 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
SSR4-202ENST00000370085 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
SSR4-202ENST00000370085 C14orf144Q96I85 54 aa8.37□□□□□ -1.07
SSR4-202ENST00000370085 HIST1H4GQ99525 98 aa8.37□□□□□ -1.07
SSR4-202ENST00000370085 TRAV23DV6A0A075B6W5 121 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms