RNA–Protein interactions for RNA: ENST00000367979.6

NR1I3-201, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-201ENST00000367979 PRR4Q16378 134 aa7.54□□□□□ -1.2
NR1I3-201ENST00000367979 IFI27L1Q96BM0 104 aa7.54□□□□□ -1.2
NR1I3-201ENST00000367979 CHCHD1Q96BP2 118 aaKnown RBP7.54□□□□□ -1.2
NR1I3-201ENST00000367979 TMEM126AQ9H061 195 aa7.54□□□□□ -1.2
NR1I3-201ENST00000367979 M0R378 163 aa7.53□□□□□ -1.2
NR1I3-201ENST00000367979 LINC00310P59036 64 aa7.53□□□□□ -1.2
NR1I3-201ENST00000367979 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
NR1I3-201ENST00000367979 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.21
NR1I3-201ENST00000367979 H0Y8G0 127 aa7.52□□□□□ -1.21
NR1I3-201ENST00000367979 COX17Q14061 63 aa7.52□□□□□ -1.21
NR1I3-201ENST00000367979 TRGC2P03986 189 aa7.51□□□□□ -1.21
NR1I3-201ENST00000367979 CRYGAP11844 174 aa7.51□□□□□ -1.21
NR1I3-201ENST00000367979 LINC00158P58513 81 aa7.51□□□□□ -1.21
NR1I3-201ENST00000367979 TYMSOSQ8TAI1 123 aa7.51□□□□□ -1.21
NR1I3-201ENST00000367979 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
NR1I3-201ENST00000367979 TSPEAR-AS2P59090 65 aa7.5□□□□□ -1.21
NR1I3-201ENST00000367979 HSBP1O75506 76 aa7.49□□□□□ -1.21
NR1I3-201ENST00000367979 SERF1AO75920 110 aa7.49□□□□□ -1.21
NR1I3-201ENST00000367979 RPL24P83731 157 aaKnown RBP7.49□□□□□ -1.21
NR1I3-201ENST00000367979 SLC7A5P1Q8MH63 180 aa7.49□□□□□ -1.21
NR1I3-201ENST00000367979 NCR3O14931 201 aa7.48□□□□□ -1.21
NR1I3-201ENST00000367979 RETNLBQ9BQ08 111 aa7.48□□□□□ -1.21
NR1I3-201ENST00000367979 MUC2Q02817 5179 aa7.47□□□□□ -1.21
NR1I3-201ENST00000367979 MEIG1Q5JSS6 88 aa7.47□□□□□ -1.21
NR1I3-201ENST00000367979 SFTA2Q6UW10 78 aa7.47□□□□□ -1.21
NR1I3-201ENST00000367979 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
NR1I3-201ENST00000367979 C3orf22Q8N5N4 141 aa7.46□□□□□ -1.22
NR1I3-201ENST00000367979 PMCHL2Q9BQD1 86 aa7.46□□□□□ -1.22
NR1I3-201ENST00000367979 HIGD2AQ9BW72 106 aa7.46□□□□□ -1.22
NR1I3-201ENST00000367979 MUC17Q685J3 4493 aa7.45□□□□□ -1.22
NR1I3-201ENST00000367979 BOD1L2Q8IYS8 172 aa7.45□□□□□ -1.22
NR1I3-201ENST00000367979 DAND5Q8N907 189 aa7.45□□□□□ -1.22
NR1I3-201ENST00000367979 PLEKHB2Q96CS7 222 aa7.45□□□□□ -1.22
NR1I3-201ENST00000367979 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
NR1I3-201ENST00000367979 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
NR1I3-201ENST00000367979 FAM229BQ4G0N7 80 aa7.44□□□□□ -1.22
NR1I3-201ENST00000367979 FABP4P15090 132 aa7.43□□□□□ -1.22
NR1I3-201ENST00000367979 LINC00304Q8N9R0 145 aa7.43□□□□□ -1.22
NR1I3-201ENST00000367979 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
NR1I3-201ENST00000367979 COLCA2A8K830 154 aa7.42□□□□□ -1.22
NR1I3-201ENST00000367979 LEPROTO15243 131 aa7.41□□□□□ -1.22
NR1I3-201ENST00000367979 ATP6V1G1O75348 118 aa7.41□□□□□ -1.22
NR1I3-201ENST00000367979 HERV-K104P63124 156 aa7.41□□□□□ -1.22
NR1I3-201ENST00000367979 SPRR4Q96PI1 79 aa7.41□□□□□ -1.22
NR1I3-201ENST00000367979 TRBV10-3A0A0K0K1G6 114 aa7.4□□□□□ -1.22
NR1I3-201ENST00000367979 MYMXA0A1B0GTQ4 84 aa7.4□□□□□ -1.22
NR1I3-201ENST00000367979 PRYO14603 147 aa7.4□□□□□ -1.22
NR1I3-201ENST00000367979 KRTAP4-16G5E9R7 235 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-201ENST00000367979 SPRR1AP35321 89 aa7.39□□□□□ -1.23
NR1I3-201ENST00000367979 J3QQQ9 107 aa7.38□□□□□ -1.23
NR1I3-201ENST00000367979 DPM2O94777 84 aa7.38□□□□□ -1.23
NR1I3-201ENST00000367979 PLNP26678 52 aa7.38□□□□□ -1.23
NR1I3-201ENST00000367979 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
NR1I3-201ENST00000367979 PPDPFQ9H3Y8 114 aa7.38□□□□□ -1.23
NR1I3-201ENST00000367979 KCNQ1DNQ9H478 68 aa7.38□□□□□ -1.23
NR1I3-201ENST00000367979 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
NR1I3-201ENST00000367979 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
NR1I3-201ENST00000367979 IGKCP01834 107 aa7.37□□□□□ -1.23
NR1I3-201ENST00000367979 NPC2P61916 151 aa7.37□□□□□ -1.23
NR1I3-201ENST00000367979 ERC2-IT1O76042 136 aa7.36□□□□□ -1.23
NR1I3-201ENST00000367979 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
NR1I3-201ENST00000367979 LINC00337Q8N6G1 96 aa7.36□□□□□ -1.23
NR1I3-201ENST00000367979 ETDCA0A1B0GVM5 59 aa7.35□□□□□ -1.23
NR1I3-201ENST00000367979 LGALS3P17931 250 aaKnown RBP7.35□□□□□ -1.23
NR1I3-201ENST00000367979 MAP1LC3CQ9BXW4 147 aa7.35□□□□□ -1.23
NR1I3-201ENST00000367979 FAT4Q6V0I7 4981 aa7.35□□□□□ -1.23
NR1I3-201ENST00000367979 LOC107984156A0A0G2JMH3 177 aa7.34□□□□□ -1.23
NR1I3-201ENST00000367979 B5MCH6 92 aa7.34□□□□□ -1.23
NR1I3-201ENST00000367979 DDTP30046 118 aa7.34□□□□□ -1.23
NR1I3-201ENST00000367979 HERVK_113P61574 105 aa7.34□□□□□ -1.23
NR1I3-201ENST00000367979 ARL17AQ8IVW1 177 aa7.34□□□□□ -1.23
NR1I3-201ENST00000367979 LINC00587B1AMM8 73 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BKO60814 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BJP06899 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BOP23527 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BBP33778 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BDP58876 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BCP62807 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST2H2BEQ16778 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-201ENST00000367979 ADAMTSL4-AS1Q5T5F5 129 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 Q8NBF4 154 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BHQ93079 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BNQ99877 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 HIST1H2BMQ99879 126 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 Q9BRP9 147 aa7.33□□□□□ -1.24
NR1I3-201ENST00000367979 A0A0J9YXY3 114 aa7.32□□□□□ -1.24
NR1I3-201ENST00000367979 NMUP48645 174 aa7.32□□□□□ -1.24
NR1I3-201ENST00000367979 ZNF706Q9Y5V0 76 aaPredicted RBP7.32□□□□□ -1.24
NR1I3-201ENST00000367979 IGLV7-46A0A075B6I9 117 aa7.31□□□□□ -1.24
NR1I3-201ENST00000367979 GAGE2AQ6NT46 116 aa7.31□□□□□ -1.24
NR1I3-201ENST00000367979 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-201ENST00000367979 TRBV10-2A0A0K0K1G8 114 aa7.3□□□□□ -1.24
NR1I3-201ENST00000367979 E9PLD3 99 aa7.3□□□□□ -1.24
NR1I3-201ENST00000367979 SYS1-DBNDD2H3BUS1 97 aa7.3□□□□□ -1.24
NR1I3-201ENST00000367979 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
NR1I3-201ENST00000367979 MIEN1Q9BRT3 115 aa7.3□□□□□ -1.24
NR1I3-201ENST00000367979 IGLV9-49A0A0B4J1Y8 123 aa7.29□□□□□ -1.24
NR1I3-201ENST00000367979 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
NR1I3-201ENST00000367979 TPRXLQ17RH7 258 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms