RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 PKD1L1Q8TDX9 2849 aa10.11□□□□□ -0.79
PRKN-204ENST00000366896 XCL1P47992 114 aa10.11□□□□□ -0.79
PRKN-204ENST00000366896 EGFEM1PQ0D2K5 195 aa10.11□□□□□ -0.79
PRKN-204ENST00000366896 C6orf226Q5I0X4 101 aa10.11□□□□□ -0.79
PRKN-204ENST00000366896 CLPSL2Q6UWE3 100 aa10.11□□□□□ -0.79
PRKN-204ENST00000366896 A0A096LPF7 62 aa10.1□□□□□ -0.79
PRKN-204ENST00000366896 KRTAP10-11P60412 298 aa10.1□□□□□ -0.79
PRKN-204ENST00000366896 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
PRKN-204ENST00000366896 LYPD5Q6UWN5 251 aa10.09□□□□□ -0.79
PRKN-204ENST00000366896 GHRHP01286 108 aa10.08□□□□□ -0.8
PRKN-204ENST00000366896 Q8N814 137 aa10.08□□□□□ -0.8
PRKN-204ENST00000366896 X6R8D5 127 aa10.08□□□□□ -0.8
PRKN-204ENST00000366896 NANOS2P60321 138 aaKnown RBP10.08□□□□□ -0.8
PRKN-204ENST00000366896 COX17Q14061 63 aa10.08□□□□□ -0.8
PRKN-204ENST00000366896 NBEAL2Q6ZNJ1 2754 aa10.08□□□□□ -0.8
PRKN-204ENST00000366896 NDUFC2O95298 119 aa10.07□□□□□ -0.8
PRKN-204ENST00000366896 LYRM9A8MSI8 78 aa10.07□□□□□ -0.8
PRKN-204ENST00000366896 TMEM256-PLSCR3K7ERE1 68 aa10.07□□□□□ -0.8
PRKN-204ENST00000366896 DNHD1Q96M86 4753 aa10.07□□□□□ -0.8
PRKN-204ENST00000366896 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
PRKN-204ENST00000366896 DNAH3Q8TD57 4116 aa10.05□□□□□ -0.8
PRKN-204ENST00000366896 TRAV23DV6A0A075B6W5 121 aa10.05□□□□□ -0.8
PRKN-204ENST00000366896 TRBV10-3A0A0K0K1G6 114 aa10.05□□□□□ -0.8
PRKN-204ENST00000366896 FAM19A1Q7Z5A9 133 aa10.05□□□□□ -0.8
PRKN-204ENST00000366896 IGHV4-28A0A0C4DH34 117 aa10.05□□□□□ -0.8
PRKN-204ENST00000366896 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
PRKN-204ENST00000366896 Q5XG85 94 aa10.04□□□□□ -0.8
PRKN-204ENST00000366896 ENHOQ6UWT2 76 aa10.04□□□□□ -0.8
PRKN-204ENST00000366896 KIAA0087Q14695 138 aa10.04□□□□□ -0.8
PRKN-204ENST00000366896 Q8N3U1 123 aa10.04□□□□□ -0.8
PRKN-204ENST00000366896 MUC7Q8TAX7 377 aa10.03□□□□□ -0.8
PRKN-204ENST00000366896 DEFB4AO15263 64 aa10.02□□□□□ -0.8
PRKN-204ENST00000366896 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.8
PRKN-204ENST00000366896 UBL5Q9BZL1 73 aa10.02□□□□□ -0.8
PRKN-204ENST00000366896 C4orf26Q17RF5 130 aa10.02□□□□□ -0.81
PRKN-204ENST00000366896 KPRPQ5T749 579 aaPredicted RBP10.01□□□□□ -0.81
PRKN-204ENST00000366896 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
PRKN-204ENST00000366896 MGAM2Q2M2H8 2515 aa10.01□□□□□ -0.81
PRKN-204ENST00000366896 IGHV4-30-4P0DP06 118 aa10□□□□□ -0.81
PRKN-204ENST00000366896 IGLV10-54A0A075B6I4 117 aa10□□□□□ -0.81
PRKN-204ENST00000366896 C20orf197Q8N268 126 aa9.99□□□□□ -0.81
PRKN-204ENST00000366896 CHCHD10Q8WYQ3 142 aaPredicted RBP9.99□□□□□ -0.81
PRKN-204ENST00000366896 NOTCH1P46531 2555 aa9.98□□□□□ -0.81
PRKN-204ENST00000366896 BCE1O60756 84 aa9.98□□□□□ -0.81
PRKN-204ENST00000366896 DEFB135Q30KP9 77 aa9.98□□□□□ -0.81
PRKN-204ENST00000366896 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
PRKN-204ENST00000366896 HRCT1Q6UXD1 115 aa9.97□□□□□ -0.81
PRKN-204ENST00000366896 Q6ZQT0 140 aa9.97□□□□□ -0.81
PRKN-204ENST00000366896 REG3AQ06141 175 aa9.97□□□□□ -0.81
PRKN-204ENST00000366896 FAM236DA0A1B0GTK5 79 aa9.96□□□□□ -0.81
PRKN-204ENST00000366896 PRB2P02812 416 aaPredicted RBP9.96□□□□□ -0.81
PRKN-204ENST00000366896 ANGP03950 147 aaKnown RBP9.96□□□□□ -0.81
PRKN-204ENST00000366896 FAM236CP0DP71 79 aa9.96□□□□□ -0.81
PRKN-204ENST00000366896 C6orf99Q4VX62 202 aa9.96□□□□□ -0.81
PRKN-204ENST00000366896 Q8NDZ9 215 aa9.96□□□□□ -0.82
PRKN-204ENST00000366896 NBEAL1Q6ZS30 2694 aa9.96□□□□□ -0.82
PRKN-204ENST00000366896 LOC110117498A0A087WWA1 95 aa9.95□□□□□ -0.82
PRKN-204ENST00000366896 APOC4P55056 127 aa9.95□□□□□ -0.82
PRKN-204ENST00000366896 LINC00575Q6W349 94 aa9.95□□□□□ -0.82
PRKN-204ENST00000366896 TRAV7A0A075B6U4 112 aa9.95□□□□□ -0.82
PRKN-204ENST00000366896 EPM2AB3EWF7 344 aa9.95□□□□□ -0.82
PRKN-204ENST00000366896 RBM3P98179 157 aaKnown RBP9.95□□□□□ -0.82
PRKN-204ENST00000366896 H7BZZ5 65 aa9.94□□□□□ -0.82
PRKN-204ENST00000366896 K7EIL1 84 aa9.94□□□□□ -0.82
PRKN-204ENST00000366896 CELA1Q9UNI1 258 aa9.94□□□□□ -0.82
PRKN-204ENST00000366896 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
PRKN-204ENST00000366896 A0A0J9YWU9 116 aa9.93□□□□□ -0.82
PRKN-204ENST00000366896 DAD1P61803 113 aa9.93□□□□□ -0.82
PRKN-204ENST00000366896 C6orf223Q8N319 242 aa9.93□□□□□ -0.82
PRKN-204ENST00000366896 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
PRKN-204ENST00000366896 MIFP14174 115 aa9.92□□□□□ -0.82
PRKN-204ENST00000366896 LELP1Q5T871 98 aa9.92□□□□□ -0.82
PRKN-204ENST00000366896 SERP1Q9Y6X1 66 aa9.91□□□□□ -0.82
PRKN-204ENST00000366896 M0R2N4 97 aa9.91□□□□□ -0.82
PRKN-204ENST00000366896 KLKP1Q107X0 134 aa9.91□□□□□ -0.82
PRKN-204ENST00000366896 C10orf25Q5T742 122 aa9.9□□□□□ -0.82
PRKN-204ENST00000366896 Q8NAQ8 132 aa9.9□□□□□ -0.82
PRKN-204ENST00000366896 PRR34Q9NV39 138 aa9.9□□□□□ -0.82
PRKN-204ENST00000366896 GVQW2A0A096LPI5 108 aaPredicted RBP9.9□□□□□ -0.83
PRKN-204ENST00000366896 Q6ZVQ6 151 aa9.9□□□□□ -0.83
PRKN-204ENST00000366896 LAMTOR3Q9UHA4 124 aa9.89□□□□□ -0.83
PRKN-204ENST00000366896 H3BQ85 93 aa9.89□□□□□ -0.83
PRKN-204ENST00000366896 HTN3P15516 51 aa9.89□□□□□ -0.83
PRKN-204ENST00000366896 UNQ6190/PRO20217Q6UXQ8 127 aa9.88□□□□□ -0.83
PRKN-204ENST00000366896 TRAV10A0A0B4J240 114 aa9.88□□□□□ -0.83
PRKN-204ENST00000366896 HAMPP81172 84 aa9.88□□□□□ -0.83
PRKN-204ENST00000366896 SPAG11BQ08648 103 aa9.88□□□□□ -0.83
PRKN-204ENST00000366896 SPART-AS1P0CW21 52 aa9.87□□□□□ -0.83
PRKN-204ENST00000366896 IGLV6-57P01721 117 aa9.87□□□□□ -0.83
PRKN-204ENST00000366896 CXCL6P80162 114 aa9.87□□□□□ -0.83
PRKN-204ENST00000366896 PDE6GP18545 87 aa9.86□□□□□ -0.83
PRKN-204ENST00000366896 Q6ZQY7 126 aa9.84□□□□□ -0.83
PRKN-204ENST00000366896 RETNQ9HD89 108 aa9.84□□□□□ -0.83
PRKN-204ENST00000366896 MRAPQ8TCY5 172 aa9.84□□□□□ -0.83
PRKN-204ENST00000366896 RMI2Q96E14 147 aa9.84□□□□□ -0.83
PRKN-204ENST00000366896 KLK12Q9UKR0 248 aa9.84□□□□□ -0.83
PRKN-204ENST00000366896 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
PRKN-204ENST00000366896 F8WEM9 126 aa9.81□□□□□ -0.84
PRKN-204ENST00000366896 TM2D3Q9BRN9 247 aa9.81□□□□□ -0.84
PRKN-204ENST00000366896 TRBV7-4A0A0J9YYF1 115 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms