RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 Q6YL49 198 aa8.86□□□□□ -0.99
VAMP1-201ENST00000361716 FP248Q71RG6 208 aaPredicted RBP8.86□□□□□ -0.99
VAMP1-201ENST00000361716 V9GYY9 64 aa8.86□□□□□ -0.99
VAMP1-201ENST00000361716 GYPEP15421 78 aa8.85□□□□□ -0.99
VAMP1-201ENST00000361716 BAHCC1Q9P281 2608 aa8.85□□□□□ -0.99
VAMP1-201ENST00000361716 TRBV10-1A0A0K0K1A3 114 aa8.85□□□□□ -0.99
VAMP1-201ENST00000361716 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
VAMP1-201ENST00000361716 SMR3AQ99954 134 aa8.85□□□□□ -0.99
VAMP1-201ENST00000361716 LINC00269Q8N2A0 174 aa8.84□□□□□ -0.99
VAMP1-201ENST00000361716 Q6ZVQ6 151 aa8.84□□□□□ -0.99
VAMP1-201ENST00000361716 Q6ZQY7 126 aa8.83□□□□□ -1
VAMP1-201ENST00000361716 ANGP03950 147 aaKnown RBP8.83□□□□□ -1
VAMP1-201ENST00000361716 IGHV4-31P0DP07 118 aa8.83□□□□□ -1
VAMP1-201ENST00000361716 A0A087WZ39 114 aa8.82□□□□□ -1
VAMP1-201ENST00000361716 MIFP14174 115 aa8.82□□□□□ -1
VAMP1-201ENST00000361716 IGHV3OR16-9A0A0B4J2B5 98 aa8.82□□□□□ -1
VAMP1-201ENST00000361716 DSCR9P59020 149 aa8.82□□□□□ -1
VAMP1-201ENST00000361716 C4orf3Q8WVX3 66 aa8.82□□□□□ -1
VAMP1-201ENST00000361716 SEC61GP60059 68 aa8.82□□□□□ -1
VAMP1-201ENST00000361716 MAST4O15021 2626 aa8.81□□□□□ -1
VAMP1-201ENST00000361716 DEFB113Q30KQ7 82 aa8.8□□□□□ -1
VAMP1-201ENST00000361716 SPATA3Q8NHX4 192 aa8.8□□□□□ -1
VAMP1-201ENST00000361716 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
VAMP1-201ENST00000361716 LINC00959A0A1B0GUT2 108 aa8.8□□□□□ -1
VAMP1-201ENST00000361716 CR1P17927 2039 aa8.79□□□□□ -1
VAMP1-201ENST00000361716 A0A096LNT2 108 aa8.79□□□□□ -1
VAMP1-201ENST00000361716 NREPQ16612 68 aa8.79□□□□□ -1
VAMP1-201ENST00000361716 PRR4Q16378 134 aa8.78□□□□□ -1
VAMP1-201ENST00000361716 FAM229BQ4G0N7 80 aa8.78□□□□□ -1
VAMP1-201ENST00000361716 IGHV4-28A0A0C4DH34 117 aa8.77□□□□□ -1
VAMP1-201ENST00000361716 Q6ZQT0 140 aa8.77□□□□□ -1
VAMP1-201ENST00000361716 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.77□□□□□ -1.01
VAMP1-201ENST00000361716 DNAJC9-AS1A6NH13 148 aa8.77□□□□□ -1.01
VAMP1-201ENST00000361716 LINC00482Q8N8I6 264 aa8.77□□□□□ -1.01
VAMP1-201ENST00000361716 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
VAMP1-201ENST00000361716 BPY2O14599 106 aa8.76□□□□□ -1.01
VAMP1-201ENST00000361716 C16orf74Q96GX8 76 aa8.76□□□□□ -1.01
VAMP1-201ENST00000361716 CELA1Q9UNI1 258 aa8.76□□□□□ -1.01
VAMP1-201ENST00000361716 NANOS2P60321 138 aaKnown RBP8.76□□□□□ -1.01
VAMP1-201ENST00000361716 XAGE1AQ9HD64 81 aa8.76□□□□□ -1.01
VAMP1-201ENST00000361716 AKAP9Q99996 3911 aa8.75□□□□□ -1.01
VAMP1-201ENST00000361716 TENM1Q9UKZ4 2725 aa8.75□□□□□ -1.01
VAMP1-201ENST00000361716 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
VAMP1-201ENST00000361716 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
VAMP1-201ENST00000361716 NSD1Q96L73 2696 aaPredicted RBP8.75□□□□□ -1.01
VAMP1-201ENST00000361716 FUSP35637 526 aaKnown RBP eCLIP8.74□□□□□ -1.01
VAMP1-201ENST00000361716 C16orf95Q9H693 158 aa8.74□□□□□ -1.01
VAMP1-201ENST00000361716 C3orf84H3BNL1 204 aa8.74□□□□□ -1.01
VAMP1-201ENST00000361716 TRBV10-3A0A0K0K1G6 114 aa8.73□□□□□ -1.01
VAMP1-201ENST00000361716 DEFB135Q30KP9 77 aa8.73□□□□□ -1.01
VAMP1-201ENST00000361716 LINC00575Q6W349 94 aa8.73□□□□□ -1.01
VAMP1-201ENST00000361716 C6orf223Q8N319 242 aa8.73□□□□□ -1.01
VAMP1-201ENST00000361716 VWFP04275 2813 aa8.73□□□□□ -1.01
VAMP1-201ENST00000361716 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
VAMP1-201ENST00000361716 DEFB105AQ8NG35 78 aa8.73□□□□□ -1.01
VAMP1-201ENST00000361716 IL17DQ8TAD2 202 aa8.72□□□□□ -1.01
VAMP1-201ENST00000361716 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
VAMP1-201ENST00000361716 STAB1Q9NY15 2570 aa8.72□□□□□ -1.01
VAMP1-201ENST00000361716 PSPHP1O15172 72 aa8.72□□□□□ -1.01
VAMP1-201ENST00000361716 LY6G6DO95868 133 aa8.71□□□□□ -1.02
VAMP1-201ENST00000361716 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
VAMP1-201ENST00000361716 MUC7Q8TAX7 377 aa8.71□□□□□ -1.02
VAMP1-201ENST00000361716 F8WDY8 70 aa8.7□□□□□ -1.02
VAMP1-201ENST00000361716 Q8NDZ9 215 aa8.7□□□□□ -1.02
VAMP1-201ENST00000361716 KLK12Q9UKR0 248 aa8.7□□□□□ -1.02
VAMP1-201ENST00000361716 CHCHD10Q8WYQ3 142 aaPredicted RBP8.7□□□□□ -1.02
VAMP1-201ENST00000361716 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
VAMP1-201ENST00000361716 LINC01006Q8NI28 216 aa8.69□□□□□ -1.02
VAMP1-201ENST00000361716 NDUFC1O43677 76 aa8.68□□□□□ -1.02
VAMP1-201ENST00000361716 Q8IZM0 81 aa8.68□□□□□ -1.02
VAMP1-201ENST00000361716 COL6A5A8TX70 2615 aa8.68□□□□□ -1.02
VAMP1-201ENST00000361716 PRYO14603 147 aa8.68□□□□□ -1.02
VAMP1-201ENST00000361716 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
VAMP1-201ENST00000361716 KRTAP1-3Q8IUG1 177 aa8.68□□□□□ -1.02
VAMP1-201ENST00000361716 ESRGQ1W209 222 aa8.67□□□□□ -1.02
VAMP1-201ENST00000361716 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
VAMP1-201ENST00000361716 GIG44P09565 113 aaPredicted RBP8.67□□□□□ -1.02
VAMP1-201ENST00000361716 REG3AQ06141 175 aa8.67□□□□□ -1.02
VAMP1-201ENST00000361716 SPAG11BQ08648 103 aa8.67□□□□□ -1.02
VAMP1-201ENST00000361716 NOTCH1P46531 2555 aa8.66□□□□□ -1.02
VAMP1-201ENST00000361716 NBEAL1Q6ZS30 2694 aa8.66□□□□□ -1.02
VAMP1-201ENST00000361716 DIRC1Q969H9 104 aa8.65□□□□□ -1.03
VAMP1-201ENST00000361716 TRRAPQ9Y4A5 3859 aa8.65□□□□□ -1.03
VAMP1-201ENST00000361716 TRBV7-4A0A0J9YYF1 115 aa8.64□□□□□ -1.03
VAMP1-201ENST00000361716 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
VAMP1-201ENST00000361716 PRO0255Q9UI72 69 aa8.64□□□□□ -1.03
VAMP1-201ENST00000361716 CXCL6P80162 114 aa8.64□□□□□ -1.03
VAMP1-201ENST00000361716 PLAC8L1A1L4L8 177 aa8.63□□□□□ -1.03
VAMP1-201ENST00000361716 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
VAMP1-201ENST00000361716 COX7BP24311 80 aa8.62□□□□□ -1.03
VAMP1-201ENST00000361716 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
VAMP1-201ENST00000361716 ATP5EP56381 51 aaPredicted RBP8.61□□□□□ -1.03
VAMP1-201ENST00000361716 CYSRT1A8MQ03 144 aa8.61□□□□□ -1.03
VAMP1-201ENST00000361716 PDE6GP18545 87 aa8.6□□□□□ -1.03
VAMP1-201ENST00000361716 CD164L2Q6UWJ8 174 aa8.6□□□□□ -1.03
VAMP1-201ENST00000361716 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.03
VAMP1-201ENST00000361716 PMAIP1Q13794 54 aa8.59□□□□□ -1.03
VAMP1-201ENST00000361716 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
VAMP1-201ENST00000361716 ZNF73O43830 326 aaPredicted RBP8.59□□□□□ -1.03
VAMP1-201ENST00000361716 BCE1O60756 84 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms