RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 SNCGO76070 127 aa13.38□□□□□ -0.27
CHD1L-201ENST00000361293 GVQW2A0A096LPI5 108 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-201ENST00000361293 XAGE1AQ9HD64 81 aa13.37□□□□□ -0.27
CHD1L-201ENST00000361293 C15orf56Q8N910 161 aa13.36□□□□□ -0.27
CHD1L-201ENST00000361293 C6orf99Q4VX62 202 aa13.36□□□□□ -0.27
CHD1L-201ENST00000361293 S100A7L2Q5SY68 101 aa13.35□□□□□ -0.27
CHD1L-201ENST00000361293 ZNF561-AS1K7EIQ3 104 aa13.35□□□□□ -0.27
CHD1L-201ENST00000361293 RPL18AQ02543 176 aaKnown RBP13.35□□□□□ -0.27
CHD1L-201ENST00000361293 LINC01556Q5JQF7 62 aa13.35□□□□□ -0.27
CHD1L-201ENST00000361293 MRAPQ8TCY5 172 aa13.35□□□□□ -0.27
CHD1L-201ENST00000361293 MUC7Q8TAX7 377 aa13.34□□□□□ -0.27
CHD1L-201ENST00000361293 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
CHD1L-201ENST00000361293 K7EIL1 84 aa13.33□□□□□ -0.28
CHD1L-201ENST00000361293 SMCR5Q8TEV8 140 aa13.33□□□□□ -0.28
CHD1L-201ENST00000361293 Q6ZRU5 148 aa13.32□□□□□ -0.28
CHD1L-201ENST00000361293 Q8N814 137 aa13.32□□□□□ -0.28
CHD1L-201ENST00000361293 C1orf43Q9BWL3 253 aa13.32□□□□□ -0.28
CHD1L-201ENST00000361293 C14orf132Q9NPU4 83 aa13.32□□□□□ -0.28
CHD1L-201ENST00000361293 A0A1B0GV72 72 aa13.32□□□□□ -0.28
CHD1L-201ENST00000361293 INAFM2P0DMQ5 153 aa13.32□□□□□ -0.28
CHD1L-201ENST00000361293 IGKV2D-24A0A075B6R9 120 aa13.31□□□□□ -0.28
CHD1L-201ENST00000361293 ORMDL1Q9P0S3 153 aa13.31□□□□□ -0.28
CHD1L-201ENST00000361293 LINC00167Q96N53 147 aa13.31□□□□□ -0.28
CHD1L-201ENST00000361293 TM2D3Q9BRN9 247 aa13.31□□□□□ -0.28
CHD1L-201ENST00000361293 MGAM2Q2M2H8 2515 aa13.3□□□□□ -0.28
CHD1L-201ENST00000361293 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
CHD1L-201ENST00000361293 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
CHD1L-201ENST00000361293 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
CHD1L-201ENST00000361293 IGLV6-57P01721 117 aa13.3□□□□□ -0.28
CHD1L-201ENST00000361293 GAGE2AQ6NT46 116 aa13.3□□□□□ -0.28
CHD1L-201ENST00000361293 OBSCN-AS1Q96MR7 158 aa13.3□□□□□ -0.28
CHD1L-201ENST00000361293 ACYP1P07311 99 aa13.29□□□□□ -0.28
CHD1L-201ENST00000361293 HUWE1Q7Z6Z7 4374 aaKnown RBP13.28□□□□□ -0.28
CHD1L-201ENST00000361293 TRAV10A0A0B4J240 114 aa13.27□□□□□ -0.29
CHD1L-201ENST00000361293 TRBV10-3A0A0K0K1G6 114 aa13.27□□□□□ -0.29
CHD1L-201ENST00000361293 DNAH10OSP0CZ25 163 aa13.27□□□□□ -0.29
CHD1L-201ENST00000361293 LINC00588Q9Y4M8 146 aa13.27□□□□□ -0.29
CHD1L-201ENST00000361293 A0A1B0GX51 115 aa13.26□□□□□ -0.29
CHD1L-201ENST00000361293 LINC00575Q6W349 94 aa13.25□□□□□ -0.29
CHD1L-201ENST00000361293 SDIM1Q6ZPB5 146 aa13.24□□□□□ -0.29
CHD1L-201ENST00000361293 Q6Q795 121 aa13.23□□□□□ -0.29
CHD1L-201ENST00000361293 C2orf48Q96LS8 159 aa13.23□□□□□ -0.29
CHD1L-201ENST00000361293 VPREB1P12018 145 aa13.22□□□□□ -0.29
CHD1L-201ENST00000361293 NDUFC2-KCTD14E9PQ53 114 aa13.21□□□□□ -0.29
CHD1L-201ENST00000361293 Q6ZRP5 223 aa13.21□□□□□ -0.29
CHD1L-201ENST00000361293 TRAV23DV6A0A075B6W5 121 aa13.2□□□□□ -0.3
CHD1L-201ENST00000361293 CASC10Q5T4H9 136 aa13.19□□□□□ -0.3
CHD1L-201ENST00000361293 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
CHD1L-201ENST00000361293 TRBV7-7A0A0K0K1E9 115 aa13.19□□□□□ -0.3
CHD1L-201ENST00000361293 hADV29S1A0JD25 119 aa13.18□□□□□ -0.3
CHD1L-201ENST00000361293 TMEM256-PLSCR3K7ERE1 68 aa13.18□□□□□ -0.3
CHD1L-201ENST00000361293 NDUFV3P56181 108 aaKnown RBP13.18□□□□□ -0.3
CHD1L-201ENST00000361293 ANAPC13Q9BS18 74 aa13.18□□□□□ -0.3
CHD1L-201ENST00000361293 NHLRC4P0CG21 123 aaPredicted RBP13.18□□□□□ -0.3
CHD1L-201ENST00000361293 SYCNQ0VAF6 134 aa13.18□□□□□ -0.3
CHD1L-201ENST00000361293 LINC00643Q86TS7 51 aa13.18□□□□□ -0.3
CHD1L-201ENST00000361293 ZNF73O43830 326 aaPredicted RBP13.16□□□□□ -0.3
CHD1L-201ENST00000361293 DIRC1Q969H9 104 aa13.16□□□□□ -0.3
CHD1L-201ENST00000361293 LINC00846Q9NV44 126 aa13.15□□□□□ -0.3
CHD1L-201ENST00000361293 STAB2Q8WWQ8 2551 aa13.15□□□□□ -0.3
CHD1L-201ENST00000361293 Q6ZQY7 126 aa13.13□□□□□ -0.31
CHD1L-201ENST00000361293 DNAH1Q9P2D7 4330 aa13.13□□□□□ -0.31
CHD1L-201ENST00000361293 JMJD7-PLA2G4BH0Y9G9 81 aa13.12□□□□□ -0.31
CHD1L-201ENST00000361293 M0R378 163 aa13.12□□□□□ -0.31
CHD1L-201ENST00000361293 USP17L23D6RBM5 183 aa13.11□□□□□ -0.31
CHD1L-201ENST00000361293 LYSTQ99698 3801 aa13.11□□□□□ -0.31
CHD1L-201ENST00000361293 CCKP06307 115 aa13.11□□□□□ -0.31
CHD1L-201ENST00000361293 F8WDY8 70 aa13.1□□□□□ -0.31
CHD1L-201ENST00000361293 ELOF1P60002 83 aaKnown RBP13.1□□□□□ -0.31
CHD1L-201ENST00000361293 COX7BP24311 80 aa13.09□□□□□ -0.31
CHD1L-201ENST00000361293 SERTAD4-AS1Q5TG53 156 aa13.08□□□□□ -0.31
CHD1L-201ENST00000361293 MDFIQ99750 246 aa13.08□□□□□ -0.31
CHD1L-201ENST00000361293 IMUPQ9GZP8 106 aa13.07□□□□□ -0.32
CHD1L-201ENST00000361293 UPK3BQ9BT76 320 aa13.06□□□□□ -0.32
CHD1L-201ENST00000361293 FAM236AA0A1B0GUQ0 79 aa13.05□□□□□ -0.32
CHD1L-201ENST00000361293 FAM236BA0A1B0GV22 79 aa13.05□□□□□ -0.32
CHD1L-201ENST00000361293 LAMTOR3Q9UHA4 124 aa13.05□□□□□ -0.32
CHD1L-201ENST00000361293 IGKV3D-7A0A0C4DH55 119 aa13.03□□□□□ -0.32
CHD1L-201ENST00000361293 TRBV7-6A0A0J9YX20 115 aa13.03□□□□□ -0.32
CHD1L-201ENST00000361293 FAM168BA1KXE4 195 aa13.02□□□□□ -0.32
CHD1L-201ENST00000361293 RBM3P98179 157 aaKnown RBP13.02□□□□□ -0.32
CHD1L-201ENST00000361293 LINC00528Q8N1L1 170 aa13.02□□□□□ -0.32
CHD1L-201ENST00000361293 KRTAP1-5Q9BYS1 174 aa13.02□□□□□ -0.32
CHD1L-201ENST00000361293 TLX1NBP0CAT3 122 aa13.02□□□□□ -0.33
CHD1L-201ENST00000361293 NKAPP1Q8N9T2 125 aa13.01□□□□□ -0.33
CHD1L-201ENST00000361293 C7orf33Q8WU49 177 aa13.01□□□□□ -0.33
CHD1L-201ENST00000361293 DNAH9Q9NYC9 4486 aa13.01□□□□□ -0.33
CHD1L-201ENST00000361293 Q6ZQT0 140 aa13.01□□□□□ -0.33
CHD1L-201ENST00000361293 M0R2N4 97 aa13□□□□□ -0.33
CHD1L-201ENST00000361293 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13□□□□□ -0.33
CHD1L-201ENST00000361293 CCDC179H3BU77 68 aa13□□□□□ -0.33
CHD1L-201ENST00000361293 RMI2Q96E14 147 aa13□□□□□ -0.33
CHD1L-201ENST00000361293 Q6JHZ5 121 aa12.99□□□□□ -0.33
CHD1L-201ENST00000361293 KRTAP7-1Q8IUC3 87 aa12.98□□□□□ -0.33
CHD1L-201ENST00000361293 KCNQ1DNQ9H478 68 aa12.97□□□□□ -0.33
CHD1L-201ENST00000361293 DNAH10Q8IVF4 4471 aa12.96□□□□□ -0.33
CHD1L-201ENST00000361293 LOC110117498A0A087WWA1 95 aa12.96□□□□□ -0.33
CHD1L-201ENST00000361293 RPL37AP8A6NKH3 93 aa12.95□□□□□ -0.34
CHD1L-201ENST00000361293 CSMD3Q7Z407 3707 aa12.95□□□□□ -0.34
CHD1L-201ENST00000361293 TENM2Q9NT68 2774 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms