RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 NANOS2P60321 138 aaKnown RBP15.26■□□□□ 0.03
LDB1-201ENST00000361198 NBEAL1Q6ZS30 2694 aa15.25■□□□□ 0.03
LDB1-201ENST00000361198 KLK5Q9Y337 293 aaPredicted RBP15.25■□□□□ 0.03
LDB1-201ENST00000361198 FAM236AA0A1B0GUQ0 79 aa15.24■□□□□ 0.03
LDB1-201ENST00000361198 FAM236BA0A1B0GV22 79 aa15.24■□□□□ 0.03
LDB1-201ENST00000361198 C6orf223Q8N319 242 aa15.24■□□□□ 0.03
LDB1-201ENST00000361198 LINC00526Q96FQ7 95 aa15.23■□□□□ 0.03
LDB1-201ENST00000361198 LINC00167Q96N53 147 aa15.23■□□□□ 0.03
LDB1-201ENST00000361198 C14orf132Q9NPU4 83 aa15.23■□□□□ 0.03
LDB1-201ENST00000361198 A0A1B0GX51 115 aa15.23■□□□□ 0.03
LDB1-201ENST00000361198 SPAG11BQ08648 103 aa15.23■□□□□ 0.03
LDB1-201ENST00000361198 SS18L2Q9UHA2 77 aa15.23■□□□□ 0.03
LDB1-201ENST00000361198 C11orf45Q8TAV5 145 aa15.22■□□□□ 0.03
LDB1-201ENST00000361198 PRB2P02812 416 aaPredicted RBP15.22■□□□□ 0.03
LDB1-201ENST00000361198 C10orf25Q5T742 122 aa15.22■□□□□ 0.03
LDB1-201ENST00000361198 ORMDL1Q9P0S3 153 aa15.22■□□□□ 0.03
LDB1-201ENST00000361198 DEFB131BA0A096LNP1 70 aa15.2■□□□□ 0.02
LDB1-201ENST00000361198 PRR3P79522 188 aaKnown RBP15.2■□□□□ 0.02
LDB1-201ENST00000361198 ESRGQ1W209 222 aa15.2■□□□□ 0.02
LDB1-201ENST00000361198 UNQ6190/PRO20217Q6UXQ8 127 aa15.2■□□□□ 0.02
LDB1-201ENST00000361198 SLPIP03973 132 aa15.2■□□□□ 0.02
LDB1-201ENST00000361198 TMEM126AQ9H061 195 aa15.2■□□□□ 0.02
LDB1-201ENST00000361198 NCR3O14931 201 aa15.17■□□□□ 0.02
LDB1-201ENST00000361198 Q8N814 137 aa15.17■□□□□ 0.02
LDB1-201ENST00000361198 MUC7Q8TAX7 377 aa15.14■□□□□ 0.01
LDB1-201ENST00000361198 LINC00846Q9NV44 126 aa15.14■□□□□ 0.01
LDB1-201ENST00000361198 Q8NDZ9 215 aa15.13■□□□□ 0.01
LDB1-201ENST00000361198 KRTAP26-1Q6PEX3 210 aa15.12■□□□□ 0.01
LDB1-201ENST00000361198 HIST1H4AP62805 103 aaKnown RBP15.11■□□□□ 0.01
LDB1-201ENST00000361198 HUWE1Q7Z6Z7 4374 aaKnown RBP15.1■□□□□ 0.01
LDB1-201ENST00000361198 TMEM256-PLSCR3K7ERE1 68 aa15.1■□□□□ 0.01
LDB1-201ENST00000361198 Q6JHZ5 121 aa15.1■□□□□ 0.01
LDB1-201ENST00000361198 JMJD7-PLA2G4BH0Y9G9 81 aa15.1■□□□□ 0.01
LDB1-201ENST00000361198 MGAM2Q2M2H8 2515 aa15.1■□□□□ 0.01
LDB1-201ENST00000361198 K7EIL1 84 aa15.09■□□□□ 0.01
LDB1-201ENST00000361198 CCKP06307 115 aa15.09■□□□□ 0.01
LDB1-201ENST00000361198 MRAPQ8TCY5 172 aa15.09■□□□□ 0.01
LDB1-201ENST00000361198 C6orf48Q9UBA6 75 aa15.08■□□□□ 0
LDB1-201ENST00000361198 C6orf99Q4VX62 202 aa15.08■□□□□ 0
LDB1-201ENST00000361198 TM2D3Q9BRN9 247 aa15.08■□□□□ 0
LDB1-201ENST00000361198 GVQW2A0A096LPI5 108 aaPredicted RBP15.07■□□□□ 0
LDB1-201ENST00000361198 LINC01556Q5JQF7 62 aa15.07■□□□□ 0
LDB1-201ENST00000361198 HIGD2BQ4VC39 106 aa15.06■□□□□ 0
LDB1-201ENST00000361198 C3orf22Q8N5N4 141 aa15.05■□□□□ -0
LDB1-201ENST00000361198 UQCRQO14949 82 aa15.04■□□□□ -0
LDB1-201ENST00000361198 S100A7L2Q5SY68 101 aa15.04■□□□□ -0
LDB1-201ENST00000361198 ZNF561-AS1K7EIQ3 104 aa15.04■□□□□ -0
LDB1-201ENST00000361198 LINC00575Q6W349 94 aa15.04■□□□□ -0
LDB1-201ENST00000361198 TRAV10A0A0B4J240 114 aa15.03■□□□□ -0
LDB1-201ENST00000361198 C15orf56Q8N910 161 aa15.02□□□□□ -0.01
LDB1-201ENST00000361198 C1orf43Q9BWL3 253 aa15.02□□□□□ -0.01
LDB1-201ENST00000361198 IGKV3D-7A0A0C4DH55 119 aa15.01□□□□□ -0.01
LDB1-201ENST00000361198 IGLV6-57P01721 117 aa15.01□□□□□ -0.01
LDB1-201ENST00000361198 CAMK2N2Q96S95 79 aa15.01□□□□□ -0.01
LDB1-201ENST00000361198 ATOX1O00244 68 aa15□□□□□ -0.01
LDB1-201ENST00000361198 IGKV2D-24A0A075B6R9 120 aa14.99□□□□□ -0.01
LDB1-201ENST00000361198 XAGE1AQ9HD64 81 aa14.99□□□□□ -0.01
LDB1-201ENST00000361198 C2orf48Q96LS8 159 aa14.99□□□□□ -0.01
LDB1-201ENST00000361198 DNAH10OSP0CZ25 163 aa14.98□□□□□ -0.01
LDB1-201ENST00000361198 COX7CP15954 63 aa14.98□□□□□ -0.01
LDB1-201ENST00000361198 RPL18AQ02543 176 aaKnown RBP14.97□□□□□ -0.01
LDB1-201ENST00000361198 Q6ZRU5 148 aa14.97□□□□□ -0.01
LDB1-201ENST00000361198 hADV29S1A0JD25 119 aa14.96□□□□□ -0.01
LDB1-201ENST00000361198 C9orf153Q5TBE3 101 aa14.96□□□□□ -0.01
LDB1-201ENST00000361198 LINC00588Q9Y4M8 146 aa14.96□□□□□ -0.01
LDB1-201ENST00000361198 ATP5EP2Q5VTU8 51 aa14.92□□□□□ -0.02
LDB1-201ENST00000361198 A0A087WVE0 104 aa14.9□□□□□ -0.02
LDB1-201ENST00000361198 CRYGAP11844 174 aa14.89□□□□□ -0.03
LDB1-201ENST00000361198 RBM3P98179 157 aaKnown RBP14.89□□□□□ -0.03
LDB1-201ENST00000361198 LOC110117498A0A087WWA1 95 aa14.89□□□□□ -0.03
LDB1-201ENST00000361198 Q6ZQT0 140 aa14.89□□□□□ -0.03
LDB1-201ENST00000361198 TRBV10-3A0A0K0K1G6 114 aa14.88□□□□□ -0.03
LDB1-201ENST00000361198 DNAH1Q9P2D7 4330 aa14.88□□□□□ -0.03
LDB1-201ENST00000361198 NDUFC2-KCTD14E9PQ53 114 aa14.87□□□□□ -0.03
LDB1-201ENST00000361198 STAB2Q8WWQ8 2551 aa14.87□□□□□ -0.03
LDB1-201ENST00000361198 COL7A1Q02388 2944 aa14.87□□□□□ -0.03
LDB1-201ENST00000361198 H3BQ85 93 aa14.87□□□□□ -0.03
LDB1-201ENST00000361198 SMIM20Q8N5G0 67 aa14.86□□□□□ -0.03
LDB1-201ENST00000361198 TRAV23DV6A0A075B6W5 121 aa14.86□□□□□ -0.03
LDB1-201ENST00000361198 USP17L23D6RBM5 183 aa14.86□□□□□ -0.03
LDB1-201ENST00000361198 MDFIQ99750 246 aa14.86□□□□□ -0.03
LDB1-201ENST00000361198 VPREB1P12018 145 aa14.85□□□□□ -0.03
LDB1-201ENST00000361198 SERP2Q8N6R1 65 aa14.85□□□□□ -0.03
LDB1-201ENST00000361198 DIRC1Q969H9 104 aa14.85□□□□□ -0.03
LDB1-201ENST00000361198 UBL5Q9BZL1 73 aa14.85□□□□□ -0.03
LDB1-201ENST00000361198 DNAH9Q9NYC9 4486 aa14.84□□□□□ -0.03
LDB1-201ENST00000361198 SYCNQ0VAF6 134 aa14.84□□□□□ -0.03
LDB1-201ENST00000361198 Q6ZQY7 126 aa14.84□□□□□ -0.03
LDB1-201ENST00000361198 Q6ZRP5 223 aa14.84□□□□□ -0.03
LDB1-201ENST00000361198 LAMTOR3Q9UHA4 124 aa14.83□□□□□ -0.04
LDB1-201ENST00000361198 F8WDY8 70 aa14.82□□□□□ -0.04
LDB1-201ENST00000361198 ZNF73O43830 326 aaPredicted RBP14.81□□□□□ -0.04
LDB1-201ENST00000361198 CASC10Q5T4H9 136 aa14.81□□□□□ -0.04
LDB1-201ENST00000361198 LYSTQ99698 3801 aa14.8□□□□□ -0.04
LDB1-201ENST00000361198 TRBV7-6A0A0J9YX20 115 aa14.8□□□□□ -0.04
LDB1-201ENST00000361198 PDE6GP18545 87 aa14.79□□□□□ -0.04
LDB1-201ENST00000361198 ELOF1P60002 83 aaKnown RBP14.78□□□□□ -0.04
LDB1-201ENST00000361198 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.78□□□□□ -0.04
LDB1-201ENST00000361198 SVIPQ8NHG7 77 aa14.78□□□□□ -0.04
LDB1-201ENST00000361198 UPK3BQ9BT76 320 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms