RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 Q8NDZ9 215 aa11.07□□□□□ -0.64
TPM1-205ENST00000357980 NDUFC2O95298 119 aa11.06□□□□□ -0.64
TPM1-205ENST00000357980 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
TPM1-205ENST00000357980 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
TPM1-205ENST00000357980 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
TPM1-205ENST00000357980 RPL13AP40429 203 aaKnown RBP11.05□□□□□ -0.64
TPM1-205ENST00000357980 A0A1W2PPM0 123 aa11.04□□□□□ -0.64
TPM1-205ENST00000357980 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
TPM1-205ENST00000357980 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
TPM1-205ENST00000357980 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.02□□□□□ -0.64
TPM1-205ENST00000357980 A0A087WTM6 91 aa11.02□□□□□ -0.64
TPM1-205ENST00000357980 TRAV13-2A0A0B4J235 113 aa11.02□□□□□ -0.64
TPM1-205ENST00000357980 H7C2G1 150 aa11.02□□□□□ -0.64
TPM1-205ENST00000357980 PRR3P79522 188 aaKnown RBP11.02□□□□□ -0.64
TPM1-205ENST00000357980 RPL18AQ02543 176 aaKnown RBP11.02□□□□□ -0.65
TPM1-205ENST00000357980 Q8N814 137 aa11.02□□□□□ -0.65
TPM1-205ENST00000357980 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
TPM1-205ENST00000357980 LOC107984640A0A0U1RRK4 108 aa11□□□□□ -0.65
TPM1-205ENST00000357980 Q1RN00 199 aa11□□□□□ -0.65
TPM1-205ENST00000357980 FABP2P12104 132 aa10.99□□□□□ -0.65
TPM1-205ENST00000357980 VPREB1P12018 145 aa10.98□□□□□ -0.65
TPM1-205ENST00000357980 VAMP3Q15836 100 aa10.98□□□□□ -0.65
TPM1-205ENST00000357980 NCR3O14931 201 aa10.98□□□□□ -0.65
TPM1-205ENST00000357980 HYDINQ4G0P3 5121 aa10.97□□□□□ -0.65
TPM1-205ENST00000357980 DNAH17Q9UFH2 4485 aa10.97□□□□□ -0.65
TPM1-205ENST00000357980 TRBV10-2A0A0K0K1G8 114 aa10.97□□□□□ -0.65
TPM1-205ENST00000357980 TRIAP1O43715 76 aa10.97□□□□□ -0.65
TPM1-205ENST00000357980 C9orf163Q8N9P6 203 aa10.97□□□□□ -0.65
TPM1-205ENST00000357980 FRAS1Q86XX4 4008 aa10.96□□□□□ -0.66
TPM1-205ENST00000357980 GAGE2BQ13066 116 aa10.95□□□□□ -0.66
TPM1-205ENST00000357980 RTL8CO15255 209 aa10.95□□□□□ -0.66
TPM1-205ENST00000357980 PSMB2P49721 201 aa10.95□□□□□ -0.66
TPM1-205ENST00000357980 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
TPM1-205ENST00000357980 PLA2G2DQ9UNK4 145 aa10.95□□□□□ -0.66
TPM1-205ENST00000357980 SPCS1Q9Y6A9 102 aa10.95□□□□□ -0.66
TPM1-205ENST00000357980 SACSQ9NZJ4 4579 aa10.94□□□□□ -0.66
TPM1-205ENST00000357980 C16orf90A8MZG2 172 aa10.94□□□□□ -0.66
TPM1-205ENST00000357980 A0A096LNI7 61 aa10.93□□□□□ -0.66
TPM1-205ENST00000357980 LCE6AA0A183 80 aa10.93□□□□□ -0.66
TPM1-205ENST00000357980 K7EP34 96 aa10.93□□□□□ -0.66
TPM1-205ENST00000357980 SMIM11BQ8TCY0 68 aa10.93□□□□□ -0.66
TPM1-205ENST00000357980 TMEM126AQ9H061 195 aa10.93□□□□□ -0.66
TPM1-205ENST00000357980 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
TPM1-205ENST00000357980 TNP2Q05952 138 aa10.93□□□□□ -0.66
TPM1-205ENST00000357980 SERTAD4-AS1Q5TG53 156 aa10.93□□□□□ -0.66
TPM1-205ENST00000357980 LYRM7Q5U5X0 104 aa10.93□□□□□ -0.66
TPM1-205ENST00000357980 IGLV6-57P01721 117 aa10.92□□□□□ -0.66
TPM1-205ENST00000357980 FAM168BA1KXE4 195 aa10.91□□□□□ -0.66
TPM1-205ENST00000357980 GAGE10A6NGK3 116 aa10.91□□□□□ -0.66
TPM1-205ENST00000357980 KRTAP7-1Q8IUC3 87 aa10.91□□□□□ -0.66
TPM1-205ENST00000357980 HECTD4Q9Y4D8 3996 aa10.91□□□□□ -0.66
TPM1-205ENST00000357980 UBE2V1Q13404 147 aa10.91□□□□□ -0.66
TPM1-205ENST00000357980 LINC01620Q4KN68 170 aa10.91□□□□□ -0.66
TPM1-205ENST00000357980 S100A7L2Q5SY68 101 aa10.91□□□□□ -0.66
TPM1-205ENST00000357980 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
TPM1-205ENST00000357980 IGLV5-37A0A075B6J1 123 aa10.9□□□□□ -0.66
TPM1-205ENST00000357980 M0R378 163 aa10.9□□□□□ -0.66
TPM1-205ENST00000357980 SCGB1C2P0DMR2 95 aa10.9□□□□□ -0.66
TPM1-205ENST00000357980 GTF2H5Q6ZYL4 71 aa10.9□□□□□ -0.66
TPM1-205ENST00000357980 PKIGQ9Y2B9 76 aa10.89□□□□□ -0.67
TPM1-205ENST00000357980 IGKV2-24A0A0C4DH68 120 aa10.88□□□□□ -0.67
TPM1-205ENST00000357980 TRBV10-3A0A0K0K1G6 114 aa10.88□□□□□ -0.67
TPM1-205ENST00000357980 TCL1BO95988 128 aa10.88□□□□□ -0.67
TPM1-205ENST00000357980 COX6CP09669 75 aa10.88□□□□□ -0.67
TPM1-205ENST00000357980 TRBV20-1A0A075B6N2 111 aa10.88□□□□□ -0.67
TPM1-205ENST00000357980 FUSP35637 526 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM1-205ENST00000357980 NKAPP1Q8N9T2 125 aa10.87□□□□□ -0.67
TPM1-205ENST00000357980 H3BMG7 143 aa10.86□□□□□ -0.67
TPM1-205ENST00000357980 CHTF8P0CG12 524 aa10.86□□□□□ -0.67
TPM1-205ENST00000357980 FAT2Q9NYQ8 4349 aa10.85□□□□□ -0.67
TPM1-205ENST00000357980 FAM19A5Q7Z5A7 132 aaPredicted RBP10.85□□□□□ -0.67
TPM1-205ENST00000357980 C7orf33Q8WU49 177 aa10.85□□□□□ -0.67
TPM1-205ENST00000357980 CLEC2BQ92478 149 aa10.85□□□□□ -0.67
TPM1-205ENST00000357980 A0A1W2PNN7 141 aa10.84□□□□□ -0.67
TPM1-205ENST00000357980 C22orf24Q9Y442 160 aa10.84□□□□□ -0.67
TPM1-205ENST00000357980 IGLV5-52A0A0A0MRZ9 124 aa10.83□□□□□ -0.68
TPM1-205ENST00000357980 LINC00474Q9P2X8 69 aa10.83□□□□□ -0.68
TPM1-205ENST00000357980 DNAH11Q96DT5 4516 aa10.82□□□□□ -0.68
TPM1-205ENST00000357980 TRAV23DV6A0A075B6W5 121 aa10.82□□□□□ -0.68
TPM1-205ENST00000357980 PANO1I0J062 215 aa10.82□□□□□ -0.68
TPM1-205ENST00000357980 LST1O00453 97 aa10.81□□□□□ -0.68
TPM1-205ENST00000357980 ATXN8Q156A1 80 aa10.81□□□□□ -0.68
TPM1-205ENST00000357980 C6orf99Q4VX62 202 aa10.81□□□□□ -0.68
TPM1-205ENST00000357980 MRPL55Q7Z7F7 128 aaKnown RBP10.81□□□□□ -0.68
TPM1-205ENST00000357980 FAM218AQ96MZ4 157 aa10.81□□□□□ -0.68
TPM1-205ENST00000357980 KRTAP10-2P60368 255 aa10.8□□□□□ -0.68
TPM1-205ENST00000357980 SPACA4Q8TDM5 124 aa10.8□□□□□ -0.68
TPM1-205ENST00000357980 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
TPM1-205ENST00000357980 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.8□□□□□ -0.68
TPM1-205ENST00000357980 H0YGX0 51 aa10.79□□□□□ -0.68
TPM1-205ENST00000357980 M0QXV9 152 aa10.79□□□□□ -0.68
TPM1-205ENST00000357980 KCNQ1DNQ9H478 68 aa10.79□□□□□ -0.68
TPM1-205ENST00000357980 IGLV1-50A0A075B6I6 118 aa10.79□□□□□ -0.68
TPM1-205ENST00000357980 ZNF73O43830 326 aaPredicted RBP10.79□□□□□ -0.68
TPM1-205ENST00000357980 PKD1P98161 4303 aa10.79□□□□□ -0.68
TPM1-205ENST00000357980 PRO0461Q9UI25 63 aa10.78□□□□□ -0.68
TPM1-205ENST00000357980 CBY1Q9Y3M2 126 aa10.78□□□□□ -0.68
TPM1-205ENST00000357980 KMT2CQ8NEZ4 4911 aaKnown RBP10.78□□□□□ -0.68
TPM1-205ENST00000357980 DIRC1Q969H9 104 aa10.77□□□□□ -0.68
TPM1-205ENST00000357980 RPL37AP8A6NKH3 93 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms