RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 C9orf116Q5BN46 136 aaPredicted RBP12.03□□□□□ -0.48
RTN4-204ENST00000357732 LELP1Q5T871 98 aa12.03□□□□□ -0.48
RTN4-204ENST00000357732 FN1P02751 2386 aaKnown RBP12.02□□□□□ -0.49
RTN4-204ENST00000357732 GHRHP01286 108 aa12.01□□□□□ -0.49
RTN4-204ENST00000357732 Q8NDZ9 215 aa12.01□□□□□ -0.49
RTN4-204ENST00000357732 PRR34Q9NV39 138 aa12.01□□□□□ -0.49
RTN4-204ENST00000357732 NBEAL2Q6ZNJ1 2754 aa12.01□□□□□ -0.49
RTN4-204ENST00000357732 GCN1Q92616 2671 aaKnown RBP12.01□□□□□ -0.49
RTN4-204ENST00000357732 MIFP14174 115 aa12□□□□□ -0.49
RTN4-204ENST00000357732 NDUFC2-KCTD14E9PQ53 114 aa11.99□□□□□ -0.49
RTN4-204ENST00000357732 DEFB4AO15263 64 aa11.99□□□□□ -0.49
RTN4-204ENST00000357732 UNQ6190/PRO20217Q6UXQ8 127 aa11.98□□□□□ -0.49
RTN4-204ENST00000357732 CYSRT1A8MQ03 144 aa11.98□□□□□ -0.49
RTN4-204ENST00000357732 DEFB135Q30KP9 77 aa11.98□□□□□ -0.49
RTN4-204ENST00000357732 KMT2BQ9UMN6 2715 aaPredicted RBP11.97□□□□□ -0.49
RTN4-204ENST00000357732 ENHOQ6UWT2 76 aa11.97□□□□□ -0.49
RTN4-204ENST00000357732 VWFP04275 2813 aa11.97□□□□□ -0.49
RTN4-204ENST00000357732 C10orf25Q5T742 122 aa11.97□□□□□ -0.49
RTN4-204ENST00000357732 Q8N3U1 123 aa11.97□□□□□ -0.49
RTN4-204ENST00000357732 LAMTOR3Q9UHA4 124 aa11.97□□□□□ -0.49
RTN4-204ENST00000357732 UNC79Q9P2D8 2635 aa11.97□□□□□ -0.49
RTN4-204ENST00000357732 DSCR8Q96T75 97 aa11.96□□□□□ -0.49
RTN4-204ENST00000357732 CYSTM1Q9H1C7 97 aa11.96□□□□□ -0.49
RTN4-204ENST00000357732 SPART-AS1P0CW21 52 aa11.96□□□□□ -0.5
RTN4-204ENST00000357732 Q8NAQ8 132 aa11.96□□□□□ -0.5
RTN4-204ENST00000357732 TRBV7-6A0A0J9YX20 115 aa11.95□□□□□ -0.5
RTN4-204ENST00000357732 J3QKU1 62 aa11.95□□□□□ -0.5
RTN4-204ENST00000357732 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
RTN4-204ENST00000357732 FAM19A1Q7Z5A9 133 aa11.94□□□□□ -0.5
RTN4-204ENST00000357732 DIRC1Q969H9 104 aa11.94□□□□□ -0.5
RTN4-204ENST00000357732 DPH3Q96FX2 82 aa11.94□□□□□ -0.5
RTN4-204ENST00000357732 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.93□□□□□ -0.5
RTN4-204ENST00000357732 TRAV23DV6A0A075B6W5 121 aa11.93□□□□□ -0.5
RTN4-204ENST00000357732 LOC107984640A0A0U1RRK4 108 aa11.93□□□□□ -0.5
RTN4-204ENST00000357732 CXCL6P80162 114 aa11.92□□□□□ -0.5
RTN4-204ENST00000357732 Q6ZQY7 126 aa11.92□□□□□ -0.5
RTN4-204ENST00000357732 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
RTN4-204ENST00000357732 FASNP49327 2511 aaKnown RBP11.91□□□□□ -0.5
RTN4-204ENST00000357732 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
RTN4-204ENST00000357732 WFDC9Q8NEX5 89 aa11.9□□□□□ -0.5
RTN4-204ENST00000357732 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
RTN4-204ENST00000357732 HELZ2Q9BYK8 2649 aaKnown RBP11.9□□□□□ -0.5
RTN4-204ENST00000357732 LINC01547P58512 204 aaPredicted RBP11.9□□□□□ -0.51
RTN4-204ENST00000357732 Q6ZVQ6 151 aa11.89□□□□□ -0.51
RTN4-204ENST00000357732 C6orf48Q9UBA6 75 aa11.89□□□□□ -0.51
RTN4-204ENST00000357732 TRAV7A0A075B6U4 112 aa11.89□□□□□ -0.51
RTN4-204ENST00000357732 ZNF73O43830 326 aaPredicted RBP11.87□□□□□ -0.51
RTN4-204ENST00000357732 ELOF1P60002 83 aaKnown RBP11.87□□□□□ -0.51
RTN4-204ENST00000357732 TRBV7-4A0A0J9YYF1 115 aa11.87□□□□□ -0.51
RTN4-204ENST00000357732 COX7BP24311 80 aa11.87□□□□□ -0.51
RTN4-204ENST00000357732 INAFM1C9JVW0 142 aa11.85□□□□□ -0.51
RTN4-204ENST00000357732 H3BNG1 76 aa11.85□□□□□ -0.51
RTN4-204ENST00000357732 EGFEM1PQ0D2K5 195 aa11.84□□□□□ -0.51
RTN4-204ENST00000357732 HTN3P15516 51 aa11.84□□□□□ -0.51
RTN4-204ENST00000357732 HAMPP81172 84 aa11.83□□□□□ -0.52
RTN4-204ENST00000357732 M0R378 163 aa11.82□□□□□ -0.52
RTN4-204ENST00000357732 TENM1Q9UKZ4 2725 aa11.82□□□□□ -0.52
RTN4-204ENST00000357732 VPREB1P12018 145 aa11.82□□□□□ -0.52
RTN4-204ENST00000357732 C5orf47Q569G3 176 aa11.82□□□□□ -0.52
RTN4-204ENST00000357732 C20orf197Q8N268 126 aa11.82□□□□□ -0.52
RTN4-204ENST00000357732 F8WDY8 70 aa11.81□□□□□ -0.52
RTN4-204ENST00000357732 M0R2N4 97 aa11.81□□□□□ -0.52
RTN4-204ENST00000357732 WIPF1O43516 503 aa11.81□□□□□ -0.52
RTN4-204ENST00000357732 KLKP1Q107X0 134 aa11.81□□□□□ -0.52
RTN4-204ENST00000357732 XAGE1AQ9HD64 81 aa11.81□□□□□ -0.52
RTN4-204ENST00000357732 CAMK2N2Q96S95 79 aa11.8□□□□□ -0.52
RTN4-204ENST00000357732 OTOGQ6ZRI0 2925 aa11.79□□□□□ -0.52
RTN4-204ENST00000357732 FAM236DA0A1B0GTK5 79 aa11.77□□□□□ -0.53
RTN4-204ENST00000357732 FAM236CP0DP71 79 aa11.77□□□□□ -0.53
RTN4-204ENST00000357732 KRTAP26-1Q6PEX3 210 aa11.76□□□□□ -0.53
RTN4-204ENST00000357732 LINC00528Q8N1L1 170 aa11.76□□□□□ -0.53
RTN4-204ENST00000357732 HECTD1Q9ULT8 2610 aa11.75□□□□□ -0.53
RTN4-204ENST00000357732 TRRAPQ9Y4A5 3859 aa11.75□□□□□ -0.53
RTN4-204ENST00000357732 H7BZZ5 65 aa11.75□□□□□ -0.53
RTN4-204ENST00000357732 OXTP01178 125 aa11.74□□□□□ -0.53
RTN4-204ENST00000357732 NDUFC1O43677 76 aa11.73□□□□□ -0.53
RTN4-204ENST00000357732 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
RTN4-204ENST00000357732 Q6ZRU5 148 aa11.72□□□□□ -0.53
RTN4-204ENST00000357732 NSD1Q96L73 2696 aaPredicted RBP11.72□□□□□ -0.53
RTN4-204ENST00000357732 NOTCH2Q04721 2471 aa11.72□□□□□ -0.53
RTN4-204ENST00000357732 TRAV10A0A0B4J240 114 aa11.71□□□□□ -0.53
RTN4-204ENST00000357732 HIGD2BQ4VC39 106 aa11.71□□□□□ -0.53
RTN4-204ENST00000357732 WFDC10BQ8IUB3 73 aa11.71□□□□□ -0.53
RTN4-204ENST00000357732 C15orf56Q8N910 161 aa11.71□□□□□ -0.53
RTN4-204ENST00000357732 KPRPQ5T749 579 aaPredicted RBP11.71□□□□□ -0.54
RTN4-204ENST00000357732 SERP1Q9Y6X1 66 aa11.71□□□□□ -0.54
RTN4-204ENST00000357732 ERC2-IT1O76042 136 aa11.69□□□□□ -0.54
RTN4-204ENST00000357732 HIVEP1P15822 2718 aa11.68□□□□□ -0.54
RTN4-204ENST00000357732 A0A1B0GW54 56 aa11.68□□□□□ -0.54
RTN4-204ENST00000357732 C1orf43Q9BWL3 253 aa11.67□□□□□ -0.54
RTN4-204ENST00000357732 ATRQ13535 2644 aa11.67□□□□□ -0.54
RTN4-204ENST00000357732 ATP5EP56381 51 aaPredicted RBP11.67□□□□□ -0.54
RTN4-204ENST00000357732 Q5XG85 94 aa11.67□□□□□ -0.54
RTN4-204ENST00000357732 KCNQ1DNQ9H478 68 aa11.66□□□□□ -0.54
RTN4-204ENST00000357732 LINC01556Q5JQF7 62 aa11.65□□□□□ -0.54
RTN4-204ENST00000357732 RETNQ9HD89 108 aa11.64□□□□□ -0.55
RTN4-204ENST00000357732 Q6ZRP5 223 aa11.64□□□□□ -0.55
RTN4-204ENST00000357732 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
RTN4-204ENST00000357732 SYCNQ0VAF6 134 aa11.62□□□□□ -0.55
RTN4-204ENST00000357732 BPY2O14599 106 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms