RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 BAALC-AS2P0C853 105 aa7.44□□□□□ -1.22
SVIP-201ENST00000354193 DEFB105AQ8NG35 78 aa7.43□□□□□ -1.22
SVIP-201ENST00000354193 TMEM126AQ9H061 195 aa7.43□□□□□ -1.22
SVIP-201ENST00000354193 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
SVIP-201ENST00000354193 PRR34Q9NV39 138 aa7.43□□□□□ -1.22
SVIP-201ENST00000354193 LAMTOR3Q9UHA4 124 aa7.43□□□□□ -1.22
SVIP-201ENST00000354193 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
SVIP-201ENST00000354193 TRBV30A0A0K0K1B3 111 aa7.41□□□□□ -1.22
SVIP-201ENST00000354193 NUPR2A6NF83 97 aa7.41□□□□□ -1.22
SVIP-201ENST00000354193 UBE2BP63146 152 aa7.4□□□□□ -1.22
SVIP-201ENST00000354193 TRBV10-3A0A0K0K1G6 114 aa7.4□□□□□ -1.23
SVIP-201ENST00000354193 DNAH10OSP0CZ25 163 aa7.39□□□□□ -1.23
SVIP-201ENST00000354193 GAGE2AQ6NT46 116 aa7.39□□□□□ -1.23
SVIP-201ENST00000354193 FAM19A3Q7Z5A8 133 aa7.39□□□□□ -1.23
SVIP-201ENST00000354193 NHLRC4P0CG21 123 aaPredicted RBP7.39□□□□□ -1.23
SVIP-201ENST00000354193 TEN1Q86WV5 123 aa7.38□□□□□ -1.23
SVIP-201ENST00000354193 A0A087WYN8 130 aa7.38□□□□□ -1.23
SVIP-201ENST00000354193 C15orf56Q8N910 161 aa7.38□□□□□ -1.23
SVIP-201ENST00000354193 PPDPFLQ8WWR9 84 aa7.37□□□□□ -1.23
SVIP-201ENST00000354193 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
SVIP-201ENST00000354193 NDUFC2-KCTD14E9PQ53 114 aa7.37□□□□□ -1.23
SVIP-201ENST00000354193 FAM218AQ96MZ4 157 aa7.36□□□□□ -1.23
SVIP-201ENST00000354193 LST1O00453 97 aa7.36□□□□□ -1.23
SVIP-201ENST00000354193 COX17Q14061 63 aa7.36□□□□□ -1.23
SVIP-201ENST00000354193 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
SVIP-201ENST00000354193 CBY1Q9Y3M2 126 aa7.36□□□□□ -1.23
SVIP-201ENST00000354193 Q6ZRP5 223 aa7.35□□□□□ -1.23
SVIP-201ENST00000354193 H0YGX0 51 aa7.35□□□□□ -1.23
SVIP-201ENST00000354193 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
SVIP-201ENST00000354193 ETDCA0A1B0GVM5 59 aa7.34□□□□□ -1.23
SVIP-201ENST00000354193 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
SVIP-201ENST00000354193 CHTF8P0CG12 524 aa7.34□□□□□ -1.23
SVIP-201ENST00000354193 KRTAP1-5Q9BYS1 174 aa7.34□□□□□ -1.23
SVIP-201ENST00000354193 C14orf132Q9NPU4 83 aa7.34□□□□□ -1.23
SVIP-201ENST00000354193 TRAV23DV6A0A075B6W5 121 aa7.33□□□□□ -1.24
SVIP-201ENST00000354193 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
SVIP-201ENST00000354193 TTC32Q5I0X7 151 aa7.33□□□□□ -1.24
SVIP-201ENST00000354193 Q6ZQY7 126 aa7.33□□□□□ -1.24
SVIP-201ENST00000354193 HIGD2AQ9BW72 106 aa7.33□□□□□ -1.24
SVIP-201ENST00000354193 APLNQ9ULZ1 77 aa7.33□□□□□ -1.24
SVIP-201ENST00000354193 COL7A1Q02388 2944 aa7.33□□□□□ -1.24
SVIP-201ENST00000354193 RPL28P46779 137 aaKnown RBP7.32□□□□□ -1.24
SVIP-201ENST00000354193 NBDYA0A0U1RRE5 68 aa7.31□□□□□ -1.24
SVIP-201ENST00000354193 LINC01561Q8N1V8 128 aa7.31□□□□□ -1.24
SVIP-201ENST00000354193 COX7BP24311 80 aa7.31□□□□□ -1.24
SVIP-201ENST00000354193 Q8NDZ9 215 aa7.31□□□□□ -1.24
SVIP-201ENST00000354193 MUC7Q8TAX7 377 aa7.31□□□□□ -1.24
SVIP-201ENST00000354193 ZNF73O43830 326 aaPredicted RBP7.31□□□□□ -1.24
SVIP-201ENST00000354193 C2orf48Q96LS8 159 aa7.31□□□□□ -1.24
SVIP-201ENST00000354193 hADV29S1A0JD25 119 aa7.3□□□□□ -1.24
SVIP-201ENST00000354193 FBN3Q75N90 2809 aa7.3□□□□□ -1.24
SVIP-201ENST00000354193 A0A096LNI7 61 aa7.3□□□□□ -1.24
SVIP-201ENST00000354193 PCP4P48539 62 aa7.3□□□□□ -1.24
SVIP-201ENST00000354193 H3BT86 120 aa7.29□□□□□ -1.24
SVIP-201ENST00000354193 M0R378 163 aa7.29□□□□□ -1.24
SVIP-201ENST00000354193 PRO0461Q9UI25 63 aa7.29□□□□□ -1.24
SVIP-201ENST00000354193 SERTAD4-AS1Q5TG53 156 aa7.29□□□□□ -1.24
SVIP-201ENST00000354193 LOC107984640A0A0U1RRK4 108 aa7.28□□□□□ -1.24
SVIP-201ENST00000354193 SIGMAR1Q99720 223 aa7.28□□□□□ -1.24
SVIP-201ENST00000354193 CSMD3Q7Z407 3707 aa7.28□□□□□ -1.24
SVIP-201ENST00000354193 GVQW2A0A096LPI5 108 aaPredicted RBP7.28□□□□□ -1.24
SVIP-201ENST00000354193 M0QXV9 152 aa7.27□□□□□ -1.25
SVIP-201ENST00000354193 MEGF8Q7Z7M0 2845 aa7.27□□□□□ -1.25
SVIP-201ENST00000354193 FAM19A1Q7Z5A9 133 aa7.27□□□□□ -1.25
SVIP-201ENST00000354193 TRACP01848 142 aa7.27□□□□□ -1.25
SVIP-201ENST00000354193 C7orf33Q8WU49 177 aa7.27□□□□□ -1.25
SVIP-201ENST00000354193 C14orf177Q52M58 125 aa7.26□□□□□ -1.25
SVIP-201ENST00000354193 PPDPFQ9H3Y8 114 aa7.26□□□□□ -1.25
SVIP-201ENST00000354193 NDUFC2O95298 119 aa7.26□□□□□ -1.25
SVIP-201ENST00000354193 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
SVIP-201ENST00000354193 C9orf129Q5T035 196 aaKnown RBP7.25□□□□□ -1.25
SVIP-201ENST00000354193 HAMPP81172 84 aa7.25□□□□□ -1.25
SVIP-201ENST00000354193 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
SVIP-201ENST00000354193 KRTAP26-1Q6PEX3 210 aa7.24□□□□□ -1.25
SVIP-201ENST00000354193 Q8N814 137 aa7.24□□□□□ -1.25
SVIP-201ENST00000354193 ANK2Q01484 3957 aa7.24□□□□□ -1.25
SVIP-201ENST00000354193 VPREB1P12018 145 aa7.24□□□□□ -1.25
SVIP-201ENST00000354193 PRLHP81277 87 aa7.24□□□□□ -1.25
SVIP-201ENST00000354193 C1orf134Q5TEV5 83 aa7.24□□□□□ -1.25
SVIP-201ENST00000354193 LINC00167Q96N53 147 aa7.24□□□□□ -1.25
SVIP-201ENST00000354193 UBE2AP49459 152 aa7.23□□□□□ -1.25
SVIP-201ENST00000354193 DSCR8Q96T75 97 aa7.23□□□□□ -1.25
SVIP-201ENST00000354193 MRPL55Q7Z7F7 128 aaKnown RBP7.22□□□□□ -1.25
SVIP-201ENST00000354193 HIST1H4AP62805 103 aaKnown RBP7.22□□□□□ -1.25
SVIP-201ENST00000354193 WWC2-AS2Q96NR7 200 aa7.22□□□□□ -1.25
SVIP-201ENST00000354193 UPK3BQ9BT76 320 aa7.22□□□□□ -1.25
SVIP-201ENST00000354193 IGKV3D-7A0A0C4DH55 119 aa7.22□□□□□ -1.25
SVIP-201ENST00000354193 TMEM256-PLSCR3K7ERE1 68 aa7.22□□□□□ -1.25
SVIP-201ENST00000354193 PHF5AQ7RTV0 110 aaKnown RBP7.22□□□□□ -1.25
SVIP-201ENST00000354193 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
SVIP-201ENST00000354193 MT-ATP8P03928 68 aa7.21□□□□□ -1.26
SVIP-201ENST00000354193 RBM3P98179 157 aaKnown RBP7.2□□□□□ -1.26
SVIP-201ENST00000354193 LINC00575Q6W349 94 aa7.2□□□□□ -1.26
SVIP-201ENST00000354193 DNHD1Q96M86 4753 aa7.2□□□□□ -1.26
SVIP-201ENST00000354193 IGLV5-52A0A0A0MRZ9 124 aa7.2□□□□□ -1.26
SVIP-201ENST00000354193 LRCOL1A6NCL2 159 aa7.2□□□□□ -1.26
SVIP-201ENST00000354193 F8WEM9 126 aa7.18□□□□□ -1.26
SVIP-201ENST00000354193 GHRHP01286 108 aa7.17□□□□□ -1.26
SVIP-201ENST00000354193 IGLV6-57P01721 117 aa7.17□□□□□ -1.26
SVIP-201ENST00000354193 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms