RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 SFTA2Q6UW10 78 aa8.86□□□□□ -0.99
SEC13-202ENST00000350697 HIST1H4GQ99525 98 aa8.86□□□□□ -0.99
SEC13-202ENST00000350697 TMEM238C9JI98 176 aa8.85□□□□□ -0.99
SEC13-202ENST00000350697 NDUFC2-KCTD14E9PQ53 114 aa8.85□□□□□ -0.99
SEC13-202ENST00000350697 SMR3BP02814 79 aaPredicted RBP8.85□□□□□ -0.99
SEC13-202ENST00000350697 Q6ZRP5 223 aa8.85□□□□□ -0.99
SEC13-202ENST00000350697 Q8N1X5 172 aa8.85□□□□□ -0.99
SEC13-202ENST00000350697 SPANXB1Q9NS25 103 aaPredicted RBP8.85□□□□□ -0.99
SEC13-202ENST00000350697 TMEM238LA0A1B0GVL6 79 aa8.84□□□□□ -0.99
SEC13-202ENST00000350697 A6NJY4 79 aa8.84□□□□□ -0.99
SEC13-202ENST00000350697 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
SEC13-202ENST00000350697 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
SEC13-202ENST00000350697 NDUFA12Q9UI09 145 aa8.84□□□□□ -0.99
SEC13-202ENST00000350697 HERV-K104P63124 156 aa8.83□□□□□ -1
SEC13-202ENST00000350697 SRSF9Q13242 221 aaKnown RBP eCLIP8.83□□□□□ -1
SEC13-202ENST00000350697 GAGE2EQ4V326 116 aa8.82□□□□□ -1
SEC13-202ENST00000350697 Q6ZVH6 145 aa8.82□□□□□ -1
SEC13-202ENST00000350697 CEND1Q8N111 149 aa8.82□□□□□ -1
SEC13-202ENST00000350697 KRTAP17-1Q9BYP8 105 aa8.82□□□□□ -1
SEC13-202ENST00000350697 GAGE2DQ9UEU5 116 aa8.82□□□□□ -1
SEC13-202ENST00000350697 TIMM17BO60830 172 aa8.81□□□□□ -1
SEC13-202ENST00000350697 COPS9Q8WXC6 57 aa8.81□□□□□ -1
SEC13-202ENST00000350697 ZNF625Q96I27 306 aaPredicted RBP8.81□□□□□ -1
SEC13-202ENST00000350697 FAM229AH3BQW9 127 aa8.8□□□□□ -1
SEC13-202ENST00000350697 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
SEC13-202ENST00000350697 A0A0J9YXY3 114 aa8.8□□□□□ -1
SEC13-202ENST00000350697 EPM2AB3EWF7 344 aa8.79□□□□□ -1
SEC13-202ENST00000350697 Q5VSD8 79 aa8.79□□□□□ -1
SEC13-202ENST00000350697 FAT1Q14517 4588 aa8.78□□□□□ -1
SEC13-202ENST00000350697 A0A1W2PNN7 141 aa8.78□□□□□ -1
SEC13-202ENST00000350697 ERG28Q9UKR5 140 aa8.78□□□□□ -1
SEC13-202ENST00000350697 SMIM13P0DJ93 91 aa8.77□□□□□ -1.01
SEC13-202ENST00000350697 PFN2P35080 140 aa8.77□□□□□ -1.01
SEC13-202ENST00000350697 RPL24P83731 157 aaKnown RBP8.77□□□□□ -1.01
SEC13-202ENST00000350697 COX17Q14061 63 aa8.77□□□□□ -1.01
SEC13-202ENST00000350697 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
SEC13-202ENST00000350697 SPANXDQ9BXN6 97 aa8.77□□□□□ -1.01
SEC13-202ENST00000350697 SPANXCQ9NY87 97 aa8.77□□□□□ -1.01
SEC13-202ENST00000350697 PLA2G1BP04054 148 aaKnown RBP8.76□□□□□ -1.01
SEC13-202ENST00000350697 IFITM1P13164 125 aa8.76□□□□□ -1.01
SEC13-202ENST00000350697 XAGE1AQ9HD64 81 aa8.76□□□□□ -1.01
SEC13-202ENST00000350697 FAM168BA1KXE4 195 aa8.75□□□□□ -1.01
SEC13-202ENST00000350697 FXYD2P54710 66 aa8.75□□□□□ -1.01
SEC13-202ENST00000350697 MEIG1Q5JSS6 88 aa8.75□□□□□ -1.01
SEC13-202ENST00000350697 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
SEC13-202ENST00000350697 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
SEC13-202ENST00000350697 FAM19A5Q7Z5A7 132 aaPredicted RBP8.73□□□□□ -1.01
SEC13-202ENST00000350697 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
SEC13-202ENST00000350697 NHP2Q9NX24 153 aaKnown RBP8.73□□□□□ -1.01
SEC13-202ENST00000350697 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
SEC13-202ENST00000350697 A0A1B0GV90 55 aa8.72□□□□□ -1.01
SEC13-202ENST00000350697 LINC00158P58513 81 aa8.72□□□□□ -1.01
SEC13-202ENST00000350697 RPL37AP61513 92 aaKnown RBP8.72□□□□□ -1.01
SEC13-202ENST00000350697 VPS13BQ7Z7G8 4022 aa8.72□□□□□ -1.01
SEC13-202ENST00000350697 A0A1B0GWB2 263 aa8.71□□□□□ -1.01
SEC13-202ENST00000350697 TAX1BP3O14907 124 aa8.71□□□□□ -1.01
SEC13-202ENST00000350697 KRTAP7-1Q8IUC3 87 aa8.71□□□□□ -1.01
SEC13-202ENST00000350697 LITAFQ99732 161 aa8.71□□□□□ -1.01
SEC13-202ENST00000350697 SND1-IT1Q9HBX3 110 aa8.71□□□□□ -1.01
SEC13-202ENST00000350697 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
SEC13-202ENST00000350697 M0QXV9 152 aa8.71□□□□□ -1.02
SEC13-202ENST00000350697 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
SEC13-202ENST00000350697 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.02
SEC13-202ENST00000350697 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
SEC13-202ENST00000350697 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
SEC13-202ENST00000350697 PLA2G2DQ9UNK4 145 aa8.7□□□□□ -1.02
SEC13-202ENST00000350697 MUSTN1Q8IVN3 82 aa8.69□□□□□ -1.02
SEC13-202ENST00000350697 A0A0B4J2C4 111 aa8.68□□□□□ -1.02
SEC13-202ENST00000350697 RAB37Q96AX2 223 aa8.68□□□□□ -1.02
SEC13-202ENST00000350697 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
SEC13-202ENST00000350697 A4D1N5 150 aa8.67□□□□□ -1.02
SEC13-202ENST00000350697 LYRM7Q5U5X0 104 aa8.67□□□□□ -1.02
SEC13-202ENST00000350697 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
SEC13-202ENST00000350697 ABCA13Q86UQ4 5058 aa8.67□□□□□ -1.02
SEC13-202ENST00000350697 IGLV5-37A0A075B6J1 123 aa8.66□□□□□ -1.02
SEC13-202ENST00000350697 PRR3P79522 188 aaKnown RBP8.66□□□□□ -1.02
SEC13-202ENST00000350697 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
SEC13-202ENST00000350697 LINC00308Q8TCZ7 52 aa8.66□□□□□ -1.02
SEC13-202ENST00000350697 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
SEC13-202ENST00000350697 K7ERJ3 54 aa8.65□□□□□ -1.02
SEC13-202ENST00000350697 INAFM2P0DMQ5 153 aa8.65□□□□□ -1.02
SEC13-202ENST00000350697 FABP2P12104 132 aa8.65□□□□□ -1.02
SEC13-202ENST00000350697 UBE2BP63146 152 aa8.65□□□□□ -1.02
SEC13-202ENST00000350697 VAMP3Q15836 100 aa8.65□□□□□ -1.02
SEC13-202ENST00000350697 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
SEC13-202ENST00000350697 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
SEC13-202ENST00000350697 PRO1854Q9UHT4 67 aa8.65□□□□□ -1.02
SEC13-202ENST00000350697 H3BUT2 72 aa8.64□□□□□ -1.03
SEC13-202ENST00000350697 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
SEC13-202ENST00000350697 CFC1BP0CG36 223 aa8.63□□□□□ -1.03
SEC13-202ENST00000350697 CFC1P0CG37 223 aa8.63□□□□□ -1.03
SEC13-202ENST00000350697 VPREB1P12018 145 aa8.63□□□□□ -1.03
SEC13-202ENST00000350697 GTF2H5Q6ZYL4 71 aa8.63□□□□□ -1.03
SEC13-202ENST00000350697 DAND5Q8N907 189 aa8.63□□□□□ -1.03
SEC13-202ENST00000350697 A0A1W2PPM0 123 aa8.63□□□□□ -1.03
SEC13-202ENST00000350697 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
SEC13-202ENST00000350697 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
SEC13-202ENST00000350697 LOC107984156A0A0G2JMH3 177 aa8.62□□□□□ -1.03
SEC13-202ENST00000350697 ARL17AQ8IVW1 177 aa8.62□□□□□ -1.03
SEC13-202ENST00000350697 Q8NDZ9 215 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms