RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 Q5XG85 94 aa3.99□□□□□ -1.77
RFC1-201ENST00000349703 ROS1P08922 2347 aa3.98□□□□□ -1.77
RFC1-201ENST00000349703 CEP290O15078 2479 aa3.98□□□□□ -1.77
RFC1-201ENST00000349703 PTPRZ1P23471 2315 aaPredicted RBP3.98□□□□□ -1.77
RFC1-201ENST00000349703 NACAE9PAV3 2078 aa3.97□□□□□ -1.77
RFC1-201ENST00000349703 IGLV10-54A0A075B6I4 117 aa3.97□□□□□ -1.77
RFC1-201ENST00000349703 LINC00959A0A1B0GUT2 108 aa3.97□□□□□ -1.77
RFC1-201ENST00000349703 H7BZZ5 65 aa3.97□□□□□ -1.77
RFC1-201ENST00000349703 LINC00575Q6W349 94 aa3.97□□□□□ -1.77
RFC1-201ENST00000349703 COL27A1Q8IZC6 1860 aaPredicted RBP3.97□□□□□ -1.77
RFC1-201ENST00000349703 ANGP03950 147 aaKnown RBP3.97□□□□□ -1.77
RFC1-201ENST00000349703 DSCR10P59022 87 aa3.96□□□□□ -1.77
RFC1-201ENST00000349703 DEFB130BP0DP73 79 aa3.96□□□□□ -1.78
RFC1-201ENST00000349703 DEFB130AP0DP74 79 aa3.96□□□□□ -1.78
RFC1-201ENST00000349703 DEFB113Q30KQ7 82 aa3.96□□□□□ -1.78
RFC1-201ENST00000349703 LINC00588Q9Y4M8 146 aa3.96□□□□□ -1.78
RFC1-201ENST00000349703 ABCA4P78363 2273 aa3.96□□□□□ -1.78
RFC1-201ENST00000349703 CLPSL2Q6UWE3 100 aa3.95□□□□□ -1.78
RFC1-201ENST00000349703 MYO15AQ9UKN7 3530 aa3.95□□□□□ -1.78
RFC1-201ENST00000349703 DEFB114Q30KQ6 69 aa3.95□□□□□ -1.78
RFC1-201ENST00000349703 UBE2DNLQ8IWF7 75 aa3.95□□□□□ -1.78
RFC1-201ENST00000349703 CDH23Q9H251 3354 aa3.94□□□□□ -1.78
RFC1-201ENST00000349703 A0A0C4DFX4 3053 aa3.94□□□□□ -1.78
RFC1-201ENST00000349703 ZDBF2Q9HCK1 2354 aa3.94□□□□□ -1.78
RFC1-201ENST00000349703 DEFB136Q30KP8 78 aa3.94□□□□□ -1.78
RFC1-201ENST00000349703 SPTBN5Q9NRC6 3674 aaKnown RBP3.94□□□□□ -1.78
RFC1-201ENST00000349703 BRCA2P51587 3418 aa3.93□□□□□ -1.78
RFC1-201ENST00000349703 ZNF861PO60384 105 aa3.93□□□□□ -1.78
RFC1-201ENST00000349703 ELOF1P60002 83 aaKnown RBP3.93□□□□□ -1.78
RFC1-201ENST00000349703 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
RFC1-201ENST00000349703 PRO0255Q9UI72 69 aa3.93□□□□□ -1.78
RFC1-201ENST00000349703 A0A1B0GU69 56 aa3.93□□□□□ -1.78
RFC1-201ENST00000349703 A8MTW9 85 aa3.92□□□□□ -1.78
RFC1-201ENST00000349703 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
RFC1-201ENST00000349703 ST20-AS1Q8NBB2 130 aa3.92□□□□□ -1.78
RFC1-201ENST00000349703 MUC4Q99102 2169 aa3.91□□□□□ -1.78
RFC1-201ENST00000349703 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
RFC1-201ENST00000349703 DOPEY2Q9Y3R5 2298 aa3.91□□□□□ -1.78
RFC1-201ENST00000349703 OXTP01178 125 aa3.9□□□□□ -1.78
RFC1-201ENST00000349703 C1orf137Q5JT78 98 aa3.9□□□□□ -1.78
RFC1-201ENST00000349703 CRIPTQ9P021 101 aa3.9□□□□□ -1.78
RFC1-201ENST00000349703 Q8NAQ8 132 aa3.9□□□□□ -1.79
RFC1-201ENST00000349703 DEFB105AQ8NG35 78 aa3.9□□□□□ -1.79
RFC1-201ENST00000349703 ETDCA0A1B0GVM5 59 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 UQCR11O14957 56 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 HTN3P15516 51 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 A0A096LPF7 62 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 CYSRT1A8MQ03 144 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 C20orf166-AS1Q96NR2 134 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 LINC00474Q9P2X8 69 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 CEP350Q5VT06 3117 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 C10orf99Q6UWK7 81 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 C22orf24Q9Y442 160 aa3.89□□□□□ -1.79
RFC1-201ENST00000349703 FLG2Q5D862 2391 aaPredicted RBP3.89□□□□□ -1.79
RFC1-201ENST00000349703 TECTAO75443 2155 aa3.88□□□□□ -1.79
RFC1-201ENST00000349703 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
RFC1-201ENST00000349703 TRBV7-4A0A0J9YYF1 115 aa3.88□□□□□ -1.79
RFC1-201ENST00000349703 GPR179Q6PRD1 2367 aa3.88□□□□□ -1.79
RFC1-201ENST00000349703 ANKHD1Q8IWZ3 2542 aaKnown RBP3.87□□□□□ -1.79
RFC1-201ENST00000349703 LOC101927531A0A1B0GV80 90 aa3.87□□□□□ -1.79
RFC1-201ENST00000349703 PRO3102Q9H379 93 aa3.87□□□□□ -1.79
RFC1-201ENST00000349703 A0A087X002 238 aa3.87□□□□□ -1.79
RFC1-201ENST00000349703 EPM2AB3EWF7 344 aa3.87□□□□□ -1.79
RFC1-201ENST00000349703 CACNA1HO95180 2353 aa3.86□□□□□ -1.79
RFC1-201ENST00000349703 DNAH14Q0VDD8 3507 aa3.86□□□□□ -1.79
RFC1-201ENST00000349703 PCNX1Q96RV3 2341 aa3.86□□□□□ -1.79
RFC1-201ENST00000349703 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
RFC1-201ENST00000349703 CNOT1A5YKK6 2376 aaKnown RBP3.85□□□□□ -1.79
RFC1-201ENST00000349703 SPTBN1Q01082 2364 aaKnown RBP3.85□□□□□ -1.79
RFC1-201ENST00000349703 Q1T7F1 81 aa3.85□□□□□ -1.79
RFC1-201ENST00000349703 UNQ6190/PRO20217Q6UXQ8 127 aa3.85□□□□□ -1.79
RFC1-201ENST00000349703 VCANP13611 3396 aa3.85□□□□□ -1.79
RFC1-201ENST00000349703 LELP1Q5T871 98 aa3.84□□□□□ -1.79
RFC1-201ENST00000349703 WDR87Q6ZQQ6 2873 aa3.84□□□□□ -1.79
RFC1-201ENST00000349703 APC2O95996 2303 aa3.84□□□□□ -1.79
RFC1-201ENST00000349703 SPART-AS1P0CW21 52 aa3.84□□□□□ -1.79
RFC1-201ENST00000349703 R4GN34 69 aa3.84□□□□□ -1.79
RFC1-201ENST00000349703 TRIOBPQ9H2D6 2365 aa3.84□□□□□ -1.79
RFC1-201ENST00000349703 HRES1P13985 223 aa3.84□□□□□ -1.79
RFC1-201ENST00000349703 OTOGLQ3ZCN5 2332 aa3.84□□□□□ -1.8
RFC1-201ENST00000349703 COL6A6A6NMZ7 2263 aa3.83□□□□□ -1.8
RFC1-201ENST00000349703 CACNA1BQ00975 2339 aa3.83□□□□□ -1.8
RFC1-201ENST00000349703 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
RFC1-201ENST00000349703 H0Y9P7 68 aa3.83□□□□□ -1.8
RFC1-201ENST00000349703 CSAG1Q6PB30 78 aa3.83□□□□□ -1.8
RFC1-201ENST00000349703 HTTP42858 3142 aa3.82□□□□□ -1.8
RFC1-201ENST00000349703 SPTBN2O15020 2390 aa3.82□□□□□ -1.8
RFC1-201ENST00000349703 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
RFC1-201ENST00000349703 C16orf95Q9H693 158 aa3.82□□□□□ -1.8
RFC1-201ENST00000349703 CREBBPQ92793 2442 aa3.81□□□□□ -1.8
RFC1-201ENST00000349703 SPTA1P02549 2419 aa3.81□□□□□ -1.8
RFC1-201ENST00000349703 ACACAQ13085 2346 aa3.81□□□□□ -1.8
RFC1-201ENST00000349703 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.81□□□□□ -1.83e-58■■■■■ 199
RFC1-201ENST00000349703 CHD7Q9P2D1 2997 aa3.81□□□□□ -1.8
RFC1-201ENST00000349703 DMDP11532 3685 aa3.81□□□□□ -1.8
RFC1-201ENST00000349703 IGFL1Q6UW32 110 aa3.81□□□□□ -1.8
RFC1-201ENST00000349703 MAPK1IP1LQ8NDC0 245 aa3.81□□□□□ -1.8
RFC1-201ENST00000349703 LAMA3Q16787 3333 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 XIRP2A4UGR9 3374 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 LCE2BO14633 110 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms