RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 NANOS2P60321 138 aaKnown RBP10.49□□□□□ -0.73
PTBP1-201ENST00000349038 IL17DQ8TAD2 202 aa10.49□□□□□ -0.73
PTBP1-201ENST00000349038 FASNP49327 2511 aaKnown RBP10.49□□□□□ -0.73
PTBP1-201ENST00000349038 LINC00959A0A1B0GUT2 108 aa10.49□□□□□ -0.73
PTBP1-201ENST00000349038 SEC61GP60059 68 aa10.49□□□□□ -0.73
PTBP1-201ENST00000349038 LINC01356Q8N9X3 169 aa10.49□□□□□ -0.73
PTBP1-201ENST00000349038 DEFB4AO15263 64 aa10.49□□□□□ -0.73
PTBP1-201ENST00000349038 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
PTBP1-201ENST00000349038 BAHCC1Q9P281 2608 aa10.48□□□□□ -0.73
PTBP1-201ENST00000349038 C3orf84H3BNL1 204 aa10.47□□□□□ -0.73
PTBP1-201ENST00000349038 C6orf223Q8N319 242 aa10.47□□□□□ -0.73
PTBP1-201ENST00000349038 TRBV6-8A0A0A6YYG3 113 aa10.47□□□□□ -0.73
PTBP1-201ENST00000349038 ATP5EP2Q5VTU8 51 aa10.47□□□□□ -0.73
PTBP1-201ENST00000349038 DSCR9P59020 149 aa10.47□□□□□ -0.73
PTBP1-201ENST00000349038 Q6YL49 198 aa10.47□□□□□ -0.73
PTBP1-201ENST00000349038 ANGP03950 147 aaKnown RBP10.46□□□□□ -0.73
PTBP1-201ENST00000349038 NREPQ16612 68 aa10.46□□□□□ -0.74
PTBP1-201ENST00000349038 Q8NDZ9 215 aa10.46□□□□□ -0.74
PTBP1-201ENST00000349038 DEFB105AQ8NG35 78 aa10.45□□□□□ -0.74
PTBP1-201ENST00000349038 BPY2O14599 106 aa10.45□□□□□ -0.74
PTBP1-201ENST00000349038 GYPEP15421 78 aa10.45□□□□□ -0.74
PTBP1-201ENST00000349038 DEFB114Q30KQ6 69 aa10.45□□□□□ -0.74
PTBP1-201ENST00000349038 Q6ZQT0 140 aa10.45□□□□□ -0.74
PTBP1-201ENST00000349038 FSHBP01225 129 aa10.45□□□□□ -0.74
PTBP1-201ENST00000349038 PSPHP1O15172 72 aa10.44□□□□□ -0.74
PTBP1-201ENST00000349038 HTN3P15516 51 aa10.44□□□□□ -0.74
PTBP1-201ENST00000349038 TMEM254Q8TBM7 123 aa10.44□□□□□ -0.74
PTBP1-201ENST00000349038 C16orf95Q9H693 158 aa10.44□□□□□ -0.74
PTBP1-201ENST00000349038 DOPEY1Q5JWR5 2465 aa10.43□□□□□ -0.74
PTBP1-201ENST00000349038 HIGD2AQ9BW72 106 aa10.43□□□□□ -0.74
PTBP1-201ENST00000349038 NBPF19A0A087WUL8 3843 aa10.43□□□□□ -0.74
PTBP1-201ENST00000349038 C4orf3Q8WVX3 66 aa10.42□□□□□ -0.74
PTBP1-201ENST00000349038 UNQ6190/PRO20217Q6UXQ8 127 aa10.42□□□□□ -0.74
PTBP1-201ENST00000349038 LINC01006Q8NI28 216 aa10.41□□□□□ -0.74
PTBP1-201ENST00000349038 C10orf25Q5T742 122 aa10.4□□□□□ -0.74
PTBP1-201ENST00000349038 FAM30AQ9NZY2 134 aa10.4□□□□□ -0.74
PTBP1-201ENST00000349038 KLKP1Q107X0 134 aa10.4□□□□□ -0.74
PTBP1-201ENST00000349038 LINC00575Q6W349 94 aa10.39□□□□□ -0.75
PTBP1-201ENST00000349038 FUSP35637 526 aaKnown RBP eCLIP10.39□□□□□ -0.758e-7■■□□□ 13.8
PTBP1-201ENST00000349038 ZNF561-AS1K7EIQ3 104 aa10.38□□□□□ -0.75
PTBP1-201ENST00000349038 MUC7Q8TAX7 377 aa10.37□□□□□ -0.75
PTBP1-201ENST00000349038 FLNAP21333 2647 aaKnown RBP10.36□□□□□ -0.75
PTBP1-201ENST00000349038 CHCHD10Q8WYQ3 142 aaPredicted RBP10.36□□□□□ -0.75
PTBP1-201ENST00000349038 KLK12Q9UKR0 248 aa10.36□□□□□ -0.75
PTBP1-201ENST00000349038 TRBV10-3A0A0K0K1G6 114 aa10.35□□□□□ -0.75
PTBP1-201ENST00000349038 ITPR3Q14573 2671 aa10.35□□□□□ -0.75
PTBP1-201ENST00000349038 LY6G6DO95868 133 aa10.34□□□□□ -0.75
PTBP1-201ENST00000349038 IGHV4-31P0DP07 118 aa10.33□□□□□ -0.76
PTBP1-201ENST00000349038 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
PTBP1-201ENST00000349038 PLAC8L1A1L4L8 177 aa10.32□□□□□ -0.76
PTBP1-201ENST00000349038 PRYO14603 147 aa10.32□□□□□ -0.76
PTBP1-201ENST00000349038 Q8IZM0 81 aa10.31□□□□□ -0.76
PTBP1-201ENST00000349038 ESRGQ1W209 222 aa10.31□□□□□ -0.76
PTBP1-201ENST00000349038 F8WDY8 70 aa10.3□□□□□ -0.76
PTBP1-201ENST00000349038 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
PTBP1-201ENST00000349038 GIG44P09565 113 aaPredicted RBP10.3□□□□□ -0.76
PTBP1-201ENST00000349038 TRBV7-4A0A0J9YYF1 115 aa10.3□□□□□ -0.76
PTBP1-201ENST00000349038 REG3AQ06141 175 aa10.29□□□□□ -0.76
PTBP1-201ENST00000349038 CYSRT1A8MQ03 144 aa10.29□□□□□ -0.76
PTBP1-201ENST00000349038 DEFB116Q30KQ4 102 aa10.29□□□□□ -0.76
PTBP1-201ENST00000349038 C16orf74Q96GX8 76 aa10.28□□□□□ -0.76
PTBP1-201ENST00000349038 CCL24O00175 119 aa10.28□□□□□ -0.76
PTBP1-201ENST00000349038 DIRC1Q969H9 104 aa10.28□□□□□ -0.76
PTBP1-201ENST00000349038 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
PTBP1-201ENST00000349038 PDZD2O15018 2839 aa10.26□□□□□ -0.77
PTBP1-201ENST00000349038 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
PTBP1-201ENST00000349038 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
PTBP1-201ENST00000349038 LINC00167Q96N53 147 aa10.25□□□□□ -0.77
PTBP1-201ENST00000349038 A8MU10 97 aa10.25□□□□□ -0.77
PTBP1-201ENST00000349038 NDUFC1O43677 76 aa10.25□□□□□ -0.77
PTBP1-201ENST00000349038 RETNQ9HD89 108 aa10.25□□□□□ -0.77
PTBP1-201ENST00000349038 COX7BP24311 80 aa10.24□□□□□ -0.77
PTBP1-201ENST00000349038 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
PTBP1-201ENST00000349038 TEP1Q99973 2627 aaKnown RBP10.24□□□□□ -0.77
PTBP1-201ENST00000349038 HIVEP1P15822 2718 aa10.24□□□□□ -0.77
PTBP1-201ENST00000349038 CXCL6P80162 114 aa10.24□□□□□ -0.77
PTBP1-201ENST00000349038 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
PTBP1-201ENST00000349038 ZNF73O43830 326 aaPredicted RBP10.23□□□□□ -0.77
PTBP1-201ENST00000349038 EPM2AB3EWF7 344 aa10.22□□□□□ -0.77
PTBP1-201ENST00000349038 LOC110117498A0A087WWA1 95 aa10.22□□□□□ -0.77
PTBP1-201ENST00000349038 PMAIP1Q13794 54 aa10.22□□□□□ -0.77
PTBP1-201ENST00000349038 CSNK1G2-AS1Q8NCQ2 148 aa10.22□□□□□ -0.77
PTBP1-201ENST00000349038 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
PTBP1-201ENST00000349038 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
PTBP1-201ENST00000349038 C19orf73Q9NVV2 129 aa10.19□□□□□ -0.78
PTBP1-201ENST00000349038 VWFP04275 2813 aa10.18□□□□□ -0.78
PTBP1-201ENST00000349038 A0A0G2JQZ4 141 aa10.18□□□□□ -0.78
PTBP1-201ENST00000349038 A0A1W2PNN7 141 aa10.18□□□□□ -0.78
PTBP1-201ENST00000349038 IGKV4-1P06312 121 aa10.17□□□□□ -0.78
PTBP1-201ENST00000349038 C1orf64Q8NEQ6 169 aa10.17□□□□□ -0.78
PTBP1-201ENST00000349038 DEFB135Q30KP9 77 aa10.16□□□□□ -0.78
PTBP1-201ENST00000349038 ATRQ13535 2644 aa10.16□□□□□ -0.78
PTBP1-201ENST00000349038 A8MUN3 132 aa10.16□□□□□ -0.78
PTBP1-201ENST00000349038 PDE6GP18545 87 aa10.16□□□□□ -0.78
PTBP1-201ENST00000349038 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
PTBP1-201ENST00000349038 PKD1L1Q8TDX9 2849 aa10.15□□□□□ -0.78
PTBP1-201ENST00000349038 KRTAP10-9P60411 292 aa10.15□□□□□ -0.78
PTBP1-201ENST00000349038 CAMK2N2Q96S95 79 aa10.15□□□□□ -0.78
PTBP1-201ENST00000349038 A0A1B0GUV1 79 aa10.14□□□□□ -0.79
PTBP1-201ENST00000349038 DNAJC9-AS1A6NH13 148 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms