RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 ANGP03950 147 aaKnown RBP15.28■□□□□ 0.04
TRIM28-202ENST00000341753 C5orf47Q569G3 176 aa15.27■□□□□ 0.04
TRIM28-202ENST00000341753 C6orf223Q8N319 242 aa15.27■□□□□ 0.04
TRIM28-202ENST00000341753 NDUFC2O95298 119 aa15.26■□□□□ 0.03
TRIM28-202ENST00000341753 LAMTOR3Q9UHA4 124 aa15.26■□□□□ 0.03
TRIM28-202ENST00000341753 C10orf25Q5T742 122 aa15.25■□□□□ 0.03
TRIM28-202ENST00000341753 ATP5EP2Q5VTU8 51 aa15.25■□□□□ 0.03
TRIM28-202ENST00000341753 CD164L2Q6UWJ8 174 aa15.25■□□□□ 0.03
TRIM28-202ENST00000341753 LINC00575Q6W349 94 aa15.24■□□□□ 0.03
TRIM28-202ENST00000341753 LINC00482Q8N8I6 264 aa15.24■□□□□ 0.03
TRIM28-202ENST00000341753 NSD1Q96L73 2696 aaPredicted RBP15.24■□□□□ 0.03
TRIM28-202ENST00000341753 ATRQ13535 2644 aa15.24■□□□□ 0.03
TRIM28-202ENST00000341753 PRO0255Q9UI72 69 aa15.23■□□□□ 0.03
TRIM28-202ENST00000341753 RBM3P98179 157 aaKnown RBP15.23■□□□□ 0.03
TRIM28-202ENST00000341753 C4orf26Q17RF5 130 aa15.23■□□□□ 0.03
TRIM28-202ENST00000341753 LYPD5Q6UWN5 251 aa15.23■□□□□ 0.03
TRIM28-202ENST00000341753 UNQ6190/PRO20217Q6UXQ8 127 aa15.23■□□□□ 0.03
TRIM28-202ENST00000341753 INAFM1C9JVW0 142 aa15.23■□□□□ 0.03
TRIM28-202ENST00000341753 REG3AQ06141 175 aa15.23■□□□□ 0.03
TRIM28-202ENST00000341753 Q6ZQT0 140 aa15.22■□□□□ 0.03
TRIM28-202ENST00000341753 COX17Q14061 63 aa15.22■□□□□ 0.03
TRIM28-202ENST00000341753 HAMPP81172 84 aa15.21■□□□□ 0.03
TRIM28-202ENST00000341753 HIVEP1P15822 2718 aa15.2■□□□□ 0.02
TRIM28-202ENST00000341753 X6R8D5 127 aa15.2■□□□□ 0.02
TRIM28-202ENST00000341753 LINC00612Q8N6U2 182 aa15.19■□□□□ 0.02
TRIM28-202ENST00000341753 Q6ZQY7 126 aa15.17■□□□□ 0.02
TRIM28-202ENST00000341753 IGHV4-28A0A0C4DH34 117 aa15.16■□□□□ 0.02
TRIM28-202ENST00000341753 ZNF561-AS1K7EIQ3 104 aa15.16■□□□□ 0.02
TRIM28-202ENST00000341753 LINC01547P58512 204 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-202ENST00000341753 HRCT1Q6UXD1 115 aa15.16■□□□□ 0.02
TRIM28-202ENST00000341753 TRAV10A0A0B4J240 114 aa15.15■□□□□ 0.02
TRIM28-202ENST00000341753 SPAG11BQ08648 103 aa15.15■□□□□ 0.02
TRIM28-202ENST00000341753 Q5XG85 94 aa15.14■□□□□ 0.01
TRIM28-202ENST00000341753 Q6ZVQ6 151 aa15.14■□□□□ 0.01
TRIM28-202ENST00000341753 TRBV10-3A0A0K0K1G6 114 aa15.13■□□□□ 0.01
TRIM28-202ENST00000341753 SCXQ7RTU7 201 aa15.13■□□□□ 0.01
TRIM28-202ENST00000341753 CYSRT1A8MQ03 144 aa15.12■□□□□ 0.01
TRIM28-202ENST00000341753 XAGE1AQ9HD64 81 aa15.11■□□□□ 0.01
TRIM28-202ENST00000341753 SNURFQ9Y675 71 aa15.11■□□□□ 0.01
TRIM28-202ENST00000341753 LOC110117498A0A087WWA1 95 aa15.1■□□□□ 0.01
TRIM28-202ENST00000341753 TEP1Q99973 2627 aaKnown RBP15.1■□□□□ 0.01
TRIM28-202ENST00000341753 DEFB135Q30KP9 77 aa15.1■□□□□ 0.01
TRIM28-202ENST00000341753 FAM236DA0A1B0GTK5 79 aa15.09■□□□□ 0.01
TRIM28-202ENST00000341753 FAM236CP0DP71 79 aa15.09■□□□□ 0.01
TRIM28-202ENST00000341753 HTN3P15516 51 aa15.08■□□□□ 0.01
TRIM28-202ENST00000341753 IGLV6-57P01721 117 aa15.08■□□□□ 0
TRIM28-202ENST00000341753 H7BZZ5 65 aa15.06■□□□□ 0
TRIM28-202ENST00000341753 TRAV7A0A075B6U4 112 aa15.06■□□□□ 0
TRIM28-202ENST00000341753 KLK12Q9UKR0 248 aa15.06■□□□□ 0
TRIM28-202ENST00000341753 NDUFC2-KCTD14E9PQ53 114 aa15.05■□□□□ 0
TRIM28-202ENST00000341753 RMI2Q96E14 147 aa15.05■□□□□ 0
TRIM28-202ENST00000341753 CELA1Q9UNI1 258 aa15.04■□□□□ -0
TRIM28-202ENST00000341753 MUC7Q8TAX7 377 aa15.03■□□□□ -0
TRIM28-202ENST00000341753 DAD1P61803 113 aa15.02■□□□□ -0
TRIM28-202ENST00000341753 LYRM9A8MSI8 78 aa15□□□□□ -0.01
TRIM28-202ENST00000341753 DIRC1Q969H9 104 aa15□□□□□ -0.01
TRIM28-202ENST00000341753 A0A0J9YWU9 116 aa15□□□□□ -0.01
TRIM28-202ENST00000341753 IGHV4-30-4P0DP06 118 aa15□□□□□ -0.01
TRIM28-202ENST00000341753 C6orf48Q9UBA6 75 aa15□□□□□ -0.01
TRIM28-202ENST00000341753 C9orf66Q5T8R8 295 aa14.99□□□□□ -0.01
TRIM28-202ENST00000341753 TM2D3Q9BRN9 247 aa14.98□□□□□ -0.01
TRIM28-202ENST00000341753 ZNF73O43830 326 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-202ENST00000341753 F8WEM9 126 aa14.96□□□□□ -0.01
TRIM28-202ENST00000341753 HIGD2BQ4VC39 106 aa14.95□□□□□ -0.02
TRIM28-202ENST00000341753 COX7BP24311 80 aa14.94□□□□□ -0.02
TRIM28-202ENST00000341753 CXCL6P80162 114 aa14.94□□□□□ -0.02
TRIM28-202ENST00000341753 Q8N9L7 120 aa14.94□□□□□ -0.02
TRIM28-202ENST00000341753 KLKP1Q107X0 134 aa14.94□□□□□ -0.02
TRIM28-202ENST00000341753 TRBV7-4A0A0J9YYF1 115 aa14.93□□□□□ -0.02
TRIM28-202ENST00000341753 SERP1Q9Y6X1 66 aa14.92□□□□□ -0.02
TRIM28-202ENST00000341753 PDE6GP18545 87 aa14.92□□□□□ -0.02
TRIM28-202ENST00000341753 FLNBO75369 2602 aaKnown RBP14.91□□□□□ -0.02
TRIM28-202ENST00000341753 LELP1Q5T871 98 aa14.91□□□□□ -0.02
TRIM28-202ENST00000341753 BCE1O60756 84 aa14.9□□□□□ -0.02
TRIM28-202ENST00000341753 F8P00451 2351 aa14.9□□□□□ -0.02
TRIM28-202ENST00000341753 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.89□□□□□ -0.03
TRIM28-202ENST00000341753 PRR34Q9NV39 138 aa14.89□□□□□ -0.03
TRIM28-202ENST00000341753 ELOF1P60002 83 aaKnown RBP14.88□□□□□ -0.03
TRIM28-202ENST00000341753 PKD1L1Q8TDX9 2849 aa14.86□□□□□ -0.03
TRIM28-202ENST00000341753 WIPF1O43516 503 aa14.86□□□□□ -0.03
TRIM28-202ENST00000341753 APOC4P55056 127 aa14.86□□□□□ -0.03
TRIM28-202ENST00000341753 Q8NAQ8 132 aa14.86□□□□□ -0.03
TRIM28-202ENST00000341753 GVQW2A0A096LPI5 108 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-202ENST00000341753 EPM2AB3EWF7 344 aa14.85□□□□□ -0.03
TRIM28-202ENST00000341753 CAMK2N2Q96S95 79 aa14.85□□□□□ -0.03
TRIM28-202ENST00000341753 ANK2Q01484 3957 aa14.84□□□□□ -0.03
TRIM28-202ENST00000341753 VPREB1P12018 145 aa14.84□□□□□ -0.03
TRIM28-202ENST00000341753 NREPQ16612 68 aa14.84□□□□□ -0.03
TRIM28-202ENST00000341753 BPY2O14599 106 aa14.82□□□□□ -0.04
TRIM28-202ENST00000341753 H3BQ85 93 aa14.81□□□□□ -0.04
TRIM28-202ENST00000341753 STAB1Q9NY15 2570 aa14.81□□□□□ -0.04
TRIM28-202ENST00000341753 OXLD1Q5BKU9 147 aa14.81□□□□□ -0.04
TRIM28-202ENST00000341753 SPART-AS1P0CW21 52 aa14.8□□□□□ -0.04
TRIM28-202ENST00000341753 Q6ZRU5 148 aa14.8□□□□□ -0.04
TRIM28-202ENST00000341753 MIFP14174 115 aa14.8□□□□□ -0.04
TRIM28-202ENST00000341753 FP248Q71RG6 208 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-202ENST00000341753 RETNQ9HD89 108 aa14.8□□□□□ -0.04
TRIM28-202ENST00000341753 LINC00474Q9P2X8 69 aa14.8□□□□□ -0.04
TRIM28-202ENST00000341753 WFDC10BQ8IUB3 73 aa14.79□□□□□ -0.04
TRIM28-202ENST00000341753 C3orf84H3BNL1 204 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms