RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 LINC01547P58512 204 aaPredicted RBP8.28□□□□□ -1.08
RTN3-203ENST00000341307 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
RTN3-203ENST00000341307 LINC00167Q96N53 147 aa8.27□□□□□ -1.09
RTN3-203ENST00000341307 MDFIQ99750 246 aa8.27□□□□□ -1.09
RTN3-203ENST00000341307 RNASE1P07998 156 aaKnown RBP8.27□□□□□ -1.09
RTN3-203ENST00000341307 DEFB114Q30KQ6 69 aa8.27□□□□□ -1.09
RTN3-203ENST00000341307 IGHV1OR15-1A0A075B7D0 117 aa8.26□□□□□ -1.09
RTN3-203ENST00000341307 CCL24O00175 119 aa8.26□□□□□ -1.09
RTN3-203ENST00000341307 TRRAPQ9Y4A5 3859 aa8.26□□□□□ -1.09
RTN3-203ENST00000341307 KRTAP24-1Q3LI83 254 aa8.26□□□□□ -1.09
RTN3-203ENST00000341307 LAMTOR3Q9UHA4 124 aa8.26□□□□□ -1.09
RTN3-203ENST00000341307 Q6ZTC4 211 aa8.25□□□□□ -1.09
RTN3-203ENST00000341307 TMEM254Q8TBM7 123 aa8.25□□□□□ -1.09
RTN3-203ENST00000341307 MAP6D1Q9H9H5 199 aa8.25□□□□□ -1.09
RTN3-203ENST00000341307 Q8N3U1 123 aa8.25□□□□□ -1.09
RTN3-203ENST00000341307 M0R2N4 97 aa8.24□□□□□ -1.09
RTN3-203ENST00000341307 VWFP04275 2813 aa8.24□□□□□ -1.09
RTN3-203ENST00000341307 CCL18P55774 89 aa8.24□□□□□ -1.09
RTN3-203ENST00000341307 DAD1P61803 113 aa8.24□□□□□ -1.09
RTN3-203ENST00000341307 Q6ZSN1 163 aa8.24□□□□□ -1.09
RTN3-203ENST00000341307 FAM19A3Q7Z5A8 133 aa8.24□□□□□ -1.09
RTN3-203ENST00000341307 HAMPP81172 84 aa8.23□□□□□ -1.09
RTN3-203ENST00000341307 NREPQ16612 68 aa8.22□□□□□ -1.09
RTN3-203ENST00000341307 Q6ZVQ6 151 aa8.22□□□□□ -1.09
RTN3-203ENST00000341307 ODF3L2Q3SX64 289 aa8.22□□□□□ -1.09
RTN3-203ENST00000341307 Q6ZQT0 140 aa8.22□□□□□ -1.09
RTN3-203ENST00000341307 Q6ZRP5 223 aa8.22□□□□□ -1.09
RTN3-203ENST00000341307 PKD1L1Q8TDX9 2849 aa8.21□□□□□ -1.1
RTN3-203ENST00000341307 TMEM256-PLSCR3K7ERE1 68 aa8.21□□□□□ -1.1
RTN3-203ENST00000341307 DGAT2L7PQ6IED9 249 aa8.21□□□□□ -1.1
RTN3-203ENST00000341307 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
RTN3-203ENST00000341307 Q8N814 137 aa8.2□□□□□ -1.1
RTN3-203ENST00000341307 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
RTN3-203ENST00000341307 Q1T7F1 81 aa8.2□□□□□ -1.1
RTN3-203ENST00000341307 PRYO14603 147 aa8.19□□□□□ -1.1
RTN3-203ENST00000341307 WFDC10AQ9H1F0 79 aa8.19□□□□□ -1.1
RTN3-203ENST00000341307 ERC2-IT1O76042 136 aa8.19□□□□□ -1.1
RTN3-203ENST00000341307 CXCL6P80162 114 aa8.19□□□□□ -1.1
RTN3-203ENST00000341307 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
RTN3-203ENST00000341307 TRBV10-1A0A0K0K1A3 114 aa8.18□□□□□ -1.1
RTN3-203ENST00000341307 A8MTW9 85 aa8.18□□□□□ -1.1
RTN3-203ENST00000341307 RBM12B-AS1Q9P1G2 102 aa8.18□□□□□ -1.1
RTN3-203ENST00000341307 hDV103S1A0JD37 113 aa8.18□□□□□ -1.1
RTN3-203ENST00000341307 LINC00158P58513 81 aa8.18□□□□□ -1.1
RTN3-203ENST00000341307 LRCOL1A6NCL2 159 aa8.17□□□□□ -1.1
RTN3-203ENST00000341307 TRBV6-4A0A1B0GX49 114 aa8.17□□□□□ -1.1
RTN3-203ENST00000341307 A8MU10 97 aa8.17□□□□□ -1.1
RTN3-203ENST00000341307 LOC110117498A0A087WWA1 95 aa8.16□□□□□ -1.1
RTN3-203ENST00000341307 STHQ8IWL8 128 aa8.16□□□□□ -1.1
RTN3-203ENST00000341307 C11orf68Q9H3H3 251 aaKnown RBP8.16□□□□□ -1.1
RTN3-203ENST00000341307 BPY2O14599 106 aa8.15□□□□□ -1.1
RTN3-203ENST00000341307 NANOS2P60321 138 aaKnown RBP8.15□□□□□ -1.1
RTN3-203ENST00000341307 SCXQ7RTU7 201 aa8.15□□□□□ -1.1
RTN3-203ENST00000341307 PSPHP1O15172 72 aa8.14□□□□□ -1.11
RTN3-203ENST00000341307 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
RTN3-203ENST00000341307 INSP01308 110 aa8.14□□□□□ -1.11
RTN3-203ENST00000341307 SPATA3Q8NHX4 192 aa8.13□□□□□ -1.11
RTN3-203ENST00000341307 IGLV1-51P01701 117 aa8.12□□□□□ -1.11
RTN3-203ENST00000341307 ANK2Q01484 3957 aa8.12□□□□□ -1.11
RTN3-203ENST00000341307 NTM-AS1Q6ZSK4 140 aa8.12□□□□□ -1.11
RTN3-203ENST00000341307 TOMM7Q9P0U1 55 aa8.12□□□□□ -1.11
RTN3-203ENST00000341307 TRAV22A0A0B4J277 110 aa8.11□□□□□ -1.11
RTN3-203ENST00000341307 KTN1-AS1Q86SY8 53 aa8.11□□□□□ -1.11
RTN3-203ENST00000341307 HIGD2AQ9BW72 106 aa8.11□□□□□ -1.11
RTN3-203ENST00000341307 OCR1Q9BZK8 76 aa8.11□□□□□ -1.11
RTN3-203ENST00000341307 K7EQD1 137 aa8.11□□□□□ -1.11
RTN3-203ENST00000341307 C11orf45Q8TAV5 145 aa8.11□□□□□ -1.11
RTN3-203ENST00000341307 CDC42SE2Q9NRR3 84 aa8.11□□□□□ -1.11
RTN3-203ENST00000341307 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
RTN3-203ENST00000341307 IGHV3-53P01767 116 aa8.1□□□□□ -1.11
RTN3-203ENST00000341307 C19orf73Q9NVV2 129 aa8.1□□□□□ -1.11
RTN3-203ENST00000341307 LINC00588Q9Y4M8 146 aa8.1□□□□□ -1.11
RTN3-203ENST00000341307 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.11
RTN3-203ENST00000341307 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
RTN3-203ENST00000341307 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
RTN3-203ENST00000341307 NBEAL1Q6ZS30 2694 aa8.07□□□□□ -1.12
RTN3-203ENST00000341307 PRR3P79522 188 aaKnown RBP8.07□□□□□ -1.12
RTN3-203ENST00000341307 SYCNQ0VAF6 134 aa8.07□□□□□ -1.12
RTN3-203ENST00000341307 TRGV1A0A0A0MS02 117 aa8.07□□□□□ -1.12
RTN3-203ENST00000341307 C9orf66Q5T8R8 295 aa8.07□□□□□ -1.12
RTN3-203ENST00000341307 MGAM2Q2M2H8 2515 aa8.06□□□□□ -1.12
RTN3-203ENST00000341307 M0R378 163 aa8.06□□□□□ -1.12
RTN3-203ENST00000341307 Q8N9L7 120 aa8.05□□□□□ -1.12
RTN3-203ENST00000341307 NOP10Q9NPE3 64 aaKnown RBP8.05□□□□□ -1.12
RTN3-203ENST00000341307 A8MUN3 132 aa8.04□□□□□ -1.12
RTN3-203ENST00000341307 LINC00575Q6W349 94 aa8.04□□□□□ -1.12
RTN3-203ENST00000341307 IGKV4-1P06312 121 aa8.03□□□□□ -1.12
RTN3-203ENST00000341307 KRTAP21-3Q3LHN1 58 aa8.03□□□□□ -1.12
RTN3-203ENST00000341307 MUC7Q8TAX7 377 aa8.03□□□□□ -1.12
RTN3-203ENST00000341307 APOC4P55056 127 aa8.03□□□□□ -1.12
RTN3-203ENST00000341307 CSNK1G2-AS1Q8NCQ2 148 aa8.03□□□□□ -1.12
RTN3-203ENST00000341307 NOTCH1P46531 2555 aa8.03□□□□□ -1.12
RTN3-203ENST00000341307 C6orf99Q4VX62 202 aa8.02□□□□□ -1.12
RTN3-203ENST00000341307 CMC4P56277 68 aaPredicted RBP8.02□□□□□ -1.13
RTN3-203ENST00000341307 UBE2BP63146 152 aa8.02□□□□□ -1.13
RTN3-203ENST00000341307 Q5VV11 94 aa8.02□□□□□ -1.13
RTN3-203ENST00000341307 PDE6GP18545 87 aa8.01□□□□□ -1.13
RTN3-203ENST00000341307 CMYA5Q8N3K9 4069 aa8.01□□□□□ -1.13
RTN3-203ENST00000341307 IGHV3OR16-9A0A0B4J2B5 98 aa8□□□□□ -1.13
RTN3-203ENST00000341307 C16orf90A8MZG2 172 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms