RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 C6orf223Q8N319 242 aa9.85□□□□□ -0.83
TDP2-201ENST00000341060 KLK12Q9UKR0 248 aa9.85□□□□□ -0.83
TDP2-201ENST00000341060 PKD1L1Q8TDX9 2849 aa9.85□□□□□ -0.83
TDP2-201ENST00000341060 ENHOQ6UWT2 76 aa9.84□□□□□ -0.83
TDP2-201ENST00000341060 C6orf99Q4VX62 202 aa9.83□□□□□ -0.84
TDP2-201ENST00000341060 S100A7L2Q5SY68 101 aa9.83□□□□□ -0.84
TDP2-201ENST00000341060 TMEM256-PLSCR3K7ERE1 68 aa9.82□□□□□ -0.84
TDP2-201ENST00000341060 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
TDP2-201ENST00000341060 LINC00526Q96FQ7 95 aa9.82□□□□□ -0.84
TDP2-201ENST00000341060 LINC00846Q9NV44 126 aa9.82□□□□□ -0.84
TDP2-201ENST00000341060 JMJD7-PLA2G4BH0Y9G9 81 aa9.82□□□□□ -0.84
TDP2-201ENST00000341060 C3orf56Q8N813 242 aa9.82□□□□□ -0.84
TDP2-201ENST00000341060 GVQW2A0A096LPI5 108 aaPredicted RBP9.81□□□□□ -0.84
TDP2-201ENST00000341060 SS18L2Q9UHA2 77 aa9.81□□□□□ -0.84
TDP2-201ENST00000341060 CCKP06307 115 aa9.79□□□□□ -0.84
TDP2-201ENST00000341060 H3BNG1 76 aa9.79□□□□□ -0.84
TDP2-201ENST00000341060 Q6JHZ5 121 aa9.79□□□□□ -0.84
TDP2-201ENST00000341060 LINC00575Q6W349 94 aa9.79□□□□□ -0.84
TDP2-201ENST00000341060 IGLV6-57P01721 117 aa9.78□□□□□ -0.84
TDP2-201ENST00000341060 HIST1H4AP62805 103 aaKnown RBP9.77□□□□□ -0.85
TDP2-201ENST00000341060 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
TDP2-201ENST00000341060 RPL18AQ02543 176 aaKnown RBP9.76□□□□□ -0.85
TDP2-201ENST00000341060 KPRPQ5T749 579 aaPredicted RBP9.76□□□□□ -0.85
TDP2-201ENST00000341060 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
TDP2-201ENST00000341060 hADV29S1A0JD25 119 aa9.74□□□□□ -0.85
TDP2-201ENST00000341060 ANK2Q01484 3957 aa9.74□□□□□ -0.85
TDP2-201ENST00000341060 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
TDP2-201ENST00000341060 RETNQ9HD89 108 aa9.74□□□□□ -0.85
TDP2-201ENST00000341060 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
TDP2-201ENST00000341060 IGKV3D-7A0A0C4DH55 119 aa9.73□□□□□ -0.85
TDP2-201ENST00000341060 KRTAP10-11P60412 298 aa9.73□□□□□ -0.85
TDP2-201ENST00000341060 KRTAP26-1Q6PEX3 210 aa9.72□□□□□ -0.85
TDP2-201ENST00000341060 Q6ZTC4 211 aa9.72□□□□□ -0.85
TDP2-201ENST00000341060 ZNF561-AS1K7EIQ3 104 aa9.71□□□□□ -0.85
TDP2-201ENST00000341060 ATOX1O00244 68 aa9.71□□□□□ -0.85
TDP2-201ENST00000341060 UQCRQO14949 82 aa9.71□□□□□ -0.85
TDP2-201ENST00000341060 C3orf22Q8N5N4 141 aa9.71□□□□□ -0.85
TDP2-201ENST00000341060 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.85
TDP2-201ENST00000341060 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
TDP2-201ENST00000341060 TRAV23DV6A0A075B6W5 121 aa9.7□□□□□ -0.86
TDP2-201ENST00000341060 CAMK2N2Q96S95 79 aa9.7□□□□□ -0.86
TDP2-201ENST00000341060 HIGD2BQ4VC39 106 aa9.69□□□□□ -0.86
TDP2-201ENST00000341060 DIRC1Q969H9 104 aa9.69□□□□□ -0.86
TDP2-201ENST00000341060 RBM3P98179 157 aaKnown RBP9.68□□□□□ -0.86
TDP2-201ENST00000341060 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
TDP2-201ENST00000341060 ATP5EP2Q5VTU8 51 aa9.68□□□□□ -0.86
TDP2-201ENST00000341060 COX7CP15954 63 aa9.68□□□□□ -0.86
TDP2-201ENST00000341060 Q6ZQT0 140 aa9.68□□□□□ -0.86
TDP2-201ENST00000341060 Q6ZQY7 126 aa9.68□□□□□ -0.86
TDP2-201ENST00000341060 C15orf56Q8N910 161 aa9.68□□□□□ -0.86
TDP2-201ENST00000341060 MDFIQ99750 246 aa9.68□□□□□ -0.86
TDP2-201ENST00000341060 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
TDP2-201ENST00000341060 A0A087WVE0 104 aa9.67□□□□□ -0.86
TDP2-201ENST00000341060 LOC110117498A0A087WWA1 95 aa9.67□□□□□ -0.86
TDP2-201ENST00000341060 H3BQ85 93 aa9.67□□□□□ -0.86
TDP2-201ENST00000341060 ESRGQ1W209 222 aa9.67□□□□□ -0.86
TDP2-201ENST00000341060 C9orf153Q5TBE3 101 aa9.67□□□□□ -0.86
TDP2-201ENST00000341060 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
TDP2-201ENST00000341060 TENM3Q9P273 2699 aa9.67□□□□□ -0.86
TDP2-201ENST00000341060 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
TDP2-201ENST00000341060 VPREB1P12018 145 aa9.66□□□□□ -0.86
TDP2-201ENST00000341060 Q6ZRU5 148 aa9.66□□□□□ -0.86
TDP2-201ENST00000341060 LAMTOR3Q9UHA4 124 aa9.66□□□□□ -0.86
TDP2-201ENST00000341060 NBEAL1Q6ZS30 2694 aa9.65□□□□□ -0.86
TDP2-201ENST00000341060 TRBV7-6A0A0J9YX20 115 aa9.65□□□□□ -0.86
TDP2-201ENST00000341060 ELOF1P60002 83 aaKnown RBP9.65□□□□□ -0.86
TDP2-201ENST00000341060 UBL5Q9BZL1 73 aa9.65□□□□□ -0.86
TDP2-201ENST00000341060 NDUFC2-KCTD14E9PQ53 114 aa9.64□□□□□ -0.87
TDP2-201ENST00000341060 LINC01556Q5JQF7 62 aa9.64□□□□□ -0.87
TDP2-201ENST00000341060 C1orf43Q9BWL3 253 aa9.64□□□□□ -0.87
TDP2-201ENST00000341060 COX7BP24311 80 aa9.63□□□□□ -0.87
TDP2-201ENST00000341060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.63□□□□□ -0.87
TDP2-201ENST00000341060 MGAM2Q2M2H8 2515 aa9.63□□□□□ -0.87
TDP2-201ENST00000341060 USP17L23D6RBM5 183 aa9.62□□□□□ -0.87
TDP2-201ENST00000341060 M0R378 163 aa9.62□□□□□ -0.87
TDP2-201ENST00000341060 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
TDP2-201ENST00000341060 DSCR8Q96T75 97 aa9.62□□□□□ -0.87
TDP2-201ENST00000341060 CRYGAP11844 174 aa9.61□□□□□ -0.87
TDP2-201ENST00000341060 PDE6GP18545 87 aa9.61□□□□□ -0.87
TDP2-201ENST00000341060 F8WDY8 70 aa9.61□□□□□ -0.87
TDP2-201ENST00000341060 DNAH3Q8TD57 4116 aa9.6□□□□□ -0.87
TDP2-201ENST00000341060 GHRHP01286 108 aa9.6□□□□□ -0.87
TDP2-201ENST00000341060 C11orf45Q8TAV5 145 aa9.6□□□□□ -0.87
TDP2-201ENST00000341060 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
TDP2-201ENST00000341060 Q6ZRP5 223 aa9.59□□□□□ -0.87
TDP2-201ENST00000341060 SERP2Q8N6R1 65 aa9.59□□□□□ -0.87
TDP2-201ENST00000341060 M0R2N4 97 aa9.58□□□□□ -0.88
TDP2-201ENST00000341060 FAM19A1Q7Z5A9 133 aa9.57□□□□□ -0.88
TDP2-201ENST00000341060 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
TDP2-201ENST00000341060 TRBV7-4A0A0J9YYF1 115 aa9.56□□□□□ -0.88
TDP2-201ENST00000341060 DNAH10OSP0CZ25 163 aa9.56□□□□□ -0.88
TDP2-201ENST00000341060 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
TDP2-201ENST00000341060 SMIM20Q8N5G0 67 aa9.56□□□□□ -0.88
TDP2-201ENST00000341060 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
TDP2-201ENST00000341060 Q6ZVQ6 151 aa9.55□□□□□ -0.88
TDP2-201ENST00000341060 PRB2P02812 416 aaPredicted RBP9.54□□□□□ -0.88
TDP2-201ENST00000341060 LINC01547P58512 204 aaPredicted RBP9.53□□□□□ -0.88
TDP2-201ENST00000341060 CYSTM1Q9H1C7 97 aa9.52□□□□□ -0.89
TDP2-201ENST00000341060 KCNQ1DNQ9H478 68 aa9.51□□□□□ -0.89
TDP2-201ENST00000341060 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms