RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 F8P00451 2351 aa11.72□□□□□ -0.53
CDK11B-201ENST00000340677 TLN2Q9Y4G6 2542 aa11.71□□□□□ -0.53
CDK11B-201ENST00000340677 TRBV6-8A0A0A6YYG3 113 aa11.71□□□□□ -0.53
CDK11B-201ENST00000340677 PRR9Q5T870 116 aa11.71□□□□□ -0.53
CDK11B-201ENST00000340677 AKAP9Q99996 3911 aa11.71□□□□□ -0.54
CDK11B-201ENST00000340677 TRBV10-1A0A0K0K1A3 114 aa11.7□□□□□ -0.54
CDK11B-201ENST00000340677 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
CDK11B-201ENST00000340677 H0Y9J4 135 aa11.7□□□□□ -0.54
CDK11B-201ENST00000340677 MOBPQ13875 183 aa11.7□□□□□ -0.54
CDK11B-201ENST00000340677 NDUFA1O15239 70 aa11.69□□□□□ -0.54
CDK11B-201ENST00000340677 C4orf3Q8WVX3 66 aa11.69□□□□□ -0.54
CDK11B-201ENST00000340677 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
CDK11B-201ENST00000340677 H0YGX0 51 aa11.68□□□□□ -0.54
CDK11B-201ENST00000340677 DEFB1P60022 68 aa11.68□□□□□ -0.54
CDK11B-201ENST00000340677 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
CDK11B-201ENST00000340677 ACANP16112 2415 aa11.67□□□□□ -0.54
CDK11B-201ENST00000340677 IGHV4OR15-8A0A075B7B6 117 aa11.67□□□□□ -0.54
CDK11B-201ENST00000340677 A0A087WW49 117 aa11.67□□□□□ -0.54
CDK11B-201ENST00000340677 A6NED7 52 aa11.67□□□□□ -0.54
CDK11B-201ENST00000340677 SONP18583 2426 aaKnown RBP11.67□□□□□ -0.54
CDK11B-201ENST00000340677 SMR3AQ99954 134 aa11.66□□□□□ -0.54
CDK11B-201ENST00000340677 OCR1Q9BZK8 76 aa11.66□□□□□ -0.54
CDK11B-201ENST00000340677 CDC42SE1Q9NRR8 79 aa11.66□□□□□ -0.54
CDK11B-201ENST00000340677 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
CDK11B-201ENST00000340677 SMIM11BQ8TCY0 68 aa11.65□□□□□ -0.54
CDK11B-201ENST00000340677 PRR15LQ9BU68 103 aa11.65□□□□□ -0.54
CDK11B-201ENST00000340677 CYP4F30PQ9H0H9 118 aa11.65□□□□□ -0.54
CDK11B-201ENST00000340677 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
CDK11B-201ENST00000340677 CRPP02741 224 aa11.64□□□□□ -0.55
CDK11B-201ENST00000340677 RPL36AP83881 106 aaKnown RBP11.64□□□□□ -0.55
CDK11B-201ENST00000340677 LINC01006Q8NI28 216 aa11.64□□□□□ -0.55
CDK11B-201ENST00000340677 RPL36ALQ969Q0 106 aaKnown RBP11.64□□□□□ -0.55
CDK11B-201ENST00000340677 HIVEP2P31629 2446 aa11.64□□□□□ -0.55
CDK11B-201ENST00000340677 C9orf116Q5BN46 136 aaPredicted RBP11.63□□□□□ -0.55
CDK11B-201ENST00000340677 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
CDK11B-201ENST00000340677 LIMD2Q9BT23 127 aa11.62□□□□□ -0.55
CDK11B-201ENST00000340677 ANK3Q12955 4377 aaKnown RBP11.62□□□□□ -0.55
CDK11B-201ENST00000340677 PRM2P04554 102 aa11.61□□□□□ -0.55
CDK11B-201ENST00000340677 KIAA0087Q14695 138 aa11.61□□□□□ -0.55
CDK11B-201ENST00000340677 Q75L30 129 aa11.61□□□□□ -0.55
CDK11B-201ENST00000340677 LENEPQ9Y5L5 61 aa11.61□□□□□ -0.55
CDK11B-201ENST00000340677 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
CDK11B-201ENST00000340677 LINC00315P59091 139 aa11.61□□□□□ -0.55
CDK11B-201ENST00000340677 C20orf203Q8NBC4 194 aa11.6□□□□□ -0.55
CDK11B-201ENST00000340677 C6orf99Q4VX62 202 aa11.6□□□□□ -0.55
CDK11B-201ENST00000340677 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
CDK11B-201ENST00000340677 Q8N9P0 234 aaPredicted RBP11.6□□□□□ -0.55
CDK11B-201ENST00000340677 SCXQ7RTU7 201 aa11.59□□□□□ -0.55
CDK11B-201ENST00000340677 IGKV3-7A0A075B6H7 116 aa11.58□□□□□ -0.56
CDK11B-201ENST00000340677 INAFM1C9JVW0 142 aa11.58□□□□□ -0.56
CDK11B-201ENST00000340677 PRB2P02812 416 aaPredicted RBP11.58□□□□□ -0.56
CDK11B-201ENST00000340677 M0R2N4 97 aa11.58□□□□□ -0.56
CDK11B-201ENST00000340677 PROK1P58294 105 aa11.58□□□□□ -0.56
CDK11B-201ENST00000340677 FAM104AQ969W3 186 aa11.58□□□□□ -0.56
CDK11B-201ENST00000340677 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
CDK11B-201ENST00000340677 Q6ZQT0 140 aa11.57□□□□□ -0.56
CDK11B-201ENST00000340677 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
CDK11B-201ENST00000340677 SLURP1P55000 103 aa11.56□□□□□ -0.56
CDK11B-201ENST00000340677 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.56□□□□□ -0.56
CDK11B-201ENST00000340677 IGKV2-28A0A075B6P5 120 aa11.55□□□□□ -0.56
CDK11B-201ENST00000340677 C3orf84H3BNL1 204 aa11.55□□□□□ -0.56
CDK11B-201ENST00000340677 IGKV2D-28P01615 120 aa11.55□□□□□ -0.56
CDK11B-201ENST00000340677 ADM2Q7Z4H4 148 aa11.55□□□□□ -0.56
CDK11B-201ENST00000340677 DEFB136Q30KP8 78 aa11.54□□□□□ -0.56
CDK11B-201ENST00000340677 PRR4Q16378 134 aa11.54□□□□□ -0.56
CDK11B-201ENST00000340677 TRBV6-5A0A0K0K1A5 114 aa11.53□□□□□ -0.56
CDK11B-201ENST00000340677 LINC00167Q96N53 147 aa11.53□□□□□ -0.56
CDK11B-201ENST00000340677 RNASE3P12724 160 aaKnown RBP11.52□□□□□ -0.56
CDK11B-201ENST00000340677 MTORP42345 2549 aa11.52□□□□□ -0.56
CDK11B-201ENST00000340677 SETD2Q9BYW2 2564 aaPredicted RBP11.52□□□□□ -0.57
CDK11B-201ENST00000340677 NF1P21359 2839 aa11.51□□□□□ -0.57
CDK11B-201ENST00000340677 F5H697 171 aa11.51□□□□□ -0.57
CDK11B-201ENST00000340677 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
CDK11B-201ENST00000340677 NSD1Q96L73 2696 aaPredicted RBP11.49□□□□□ -0.57
CDK11B-201ENST00000340677 DEFB114Q30KQ6 69 aa11.48□□□□□ -0.57
CDK11B-201ENST00000340677 LOC110117498A0A087WWA1 95 aa11.48□□□□□ -0.57
CDK11B-201ENST00000340677 FAM74A4Q5TZK3 123 aa11.47□□□□□ -0.57
CDK11B-201ENST00000340677 FN1P02751 2386 aaKnown RBP11.46□□□□□ -0.57
CDK11B-201ENST00000340677 LOC101927531A0A1B0GV80 90 aa11.46□□□□□ -0.58
CDK11B-201ENST00000340677 A8MTW9 85 aa11.46□□□□□ -0.58
CDK11B-201ENST00000340677 ZCCHC13Q8WW36 166 aaKnown RBP11.46□□□□□ -0.58
CDK11B-201ENST00000340677 RETNLBQ9BQ08 111 aa11.45□□□□□ -0.58
CDK11B-201ENST00000340677 SND1-IT1Q9HBX3 110 aa11.45□□□□□ -0.58
CDK11B-201ENST00000340677 LCE6AA0A183 80 aa11.44□□□□□ -0.58
CDK11B-201ENST00000340677 REG3AQ06141 175 aa11.44□□□□□ -0.58
CDK11B-201ENST00000340677 IGLV5-39A0A0G2JS06 123 aa11.43□□□□□ -0.58
CDK11B-201ENST00000340677 KRTAP10-3P60369 221 aa11.43□□□□□ -0.58
CDK11B-201ENST00000340677 PRR3P79522 188 aaKnown RBP11.43□□□□□ -0.58
CDK11B-201ENST00000340677 CMC4P56277 68 aaPredicted RBP11.42□□□□□ -0.58
CDK11B-201ENST00000340677 Q8N9L7 120 aa11.42□□□□□ -0.58
CDK11B-201ENST00000340677 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
CDK11B-201ENST00000340677 Q8N814 137 aa11.42□□□□□ -0.58
CDK11B-201ENST00000340677 LINC00476Q8WZB0 136 aa11.42□□□□□ -0.58
CDK11B-201ENST00000340677 CELA1Q9UNI1 258 aa11.42□□□□□ -0.58
CDK11B-201ENST00000340677 IGLV5-45A0A087WSX0 123 aa11.41□□□□□ -0.58
CDK11B-201ENST00000340677 IGHV6-1A0A0B4J1U7 121 aa11.41□□□□□ -0.58
CDK11B-201ENST00000340677 IGKV3-20P01619 116 aa11.41□□□□□ -0.58
CDK11B-201ENST00000340677 IGKV4-1P06312 121 aa11.4□□□□□ -0.58
CDK11B-201ENST00000340677 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.58
CDK11B-201ENST00000340677 C19orf73Q9NVV2 129 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms