RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 RNASE1P07998 156 aaKnown RBP3.91□□□□□ -1.78
CSDE1-202ENST00000339438 IGHV3-38A0A0C4DH36 116 aa3.91□□□□□ -1.78
CSDE1-202ENST00000339438 A0A0U1RRA0 63 aa3.91□□□□□ -1.78
CSDE1-202ENST00000339438 A0A0U1RQV1 116 aa3.9□□□□□ -1.78
CSDE1-202ENST00000339438 KNCNA6PVL3 124 aa3.9□□□□□ -1.78
CSDE1-202ENST00000339438 IL17DQ8TAD2 202 aa3.9□□□□□ -1.78
CSDE1-202ENST00000339438 DNAJC9-AS1A6NH13 148 aa3.9□□□□□ -1.79
CSDE1-202ENST00000339438 SLPIP03973 132 aa3.9□□□□□ -1.79
CSDE1-202ENST00000339438 F8WEM9 126 aa3.9□□□□□ -1.79
CSDE1-202ENST00000339438 C1orf158Q8N1D5 194 aa3.9□□□□□ -1.79
CSDE1-202ENST00000339438 PCLOQ9Y6V0 5065 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 IGKV3-20P01619 116 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 TRAV13-2A0A0B4J235 113 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 M0R2N4 97 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 NDUFA4O00483 81 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 NANOS2P60321 138 aaKnown RBP3.89□□□□□ -1.79
CSDE1-202ENST00000339438 Q6ZRU5 148 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 LECT2O14960 151 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 Q6ZTI0 123 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 OVOL2Q9BRP0 275 aa3.89□□□□□ -1.79
CSDE1-202ENST00000339438 PRR15Q8IV56 129 aa3.88□□□□□ -1.79
CSDE1-202ENST00000339438 ZNF702PQ9H963 129 aa3.88□□□□□ -1.79
CSDE1-202ENST00000339438 IGHV1OR15-1A0A075B7D0 117 aa3.88□□□□□ -1.79
CSDE1-202ENST00000339438 H0YGX0 51 aa3.88□□□□□ -1.79
CSDE1-202ENST00000339438 Q6ZTC4 211 aa3.88□□□□□ -1.79
CSDE1-202ENST00000339438 NBEAL2Q6ZNJ1 2754 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 K7EQG2 157 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 SLURP1P55000 103 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 COPS9Q8WXC6 57 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 TM2D3Q9BRN9 247 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 TENM3Q9P273 2699 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 IGHV3-73A0A0B4J1V6 119 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 CCL18P55774 89 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 EGFEM1PQ0D2K5 195 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
CSDE1-202ENST00000339438 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-202ENST00000339438 RYR1P21817 5038 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 NOTCH1P46531 2555 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 HTN1P15515 57 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 Q6ZQT0 140 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 SND1-IT1Q9HBX3 110 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 CRPP02741 224 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 PRM2P04554 102 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 MIFP14174 115 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 RHPN1-AS1Q9BWJ2 59 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 C6orf226Q5I0X4 101 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 S100A7L2Q5SY68 101 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 NTM-AS1Q6ZSK4 140 aa3.86□□□□□ -1.79
CSDE1-202ENST00000339438 FAT1Q14517 4588 aa3.85□□□□□ -1.79
CSDE1-202ENST00000339438 IGLV1-40P01703 118 aa3.85□□□□□ -1.79
CSDE1-202ENST00000339438 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
CSDE1-202ENST00000339438 RPL36ALQ969Q0 106 aaKnown RBP3.85□□□□□ -1.79
CSDE1-202ENST00000339438 Q8N814 137 aa3.85□□□□□ -1.79
CSDE1-202ENST00000339438 RETNQ9HD89 108 aa3.85□□□□□ -1.79
CSDE1-202ENST00000339438 LOC110117498A0A087WWA1 95 aa3.85□□□□□ -1.79
CSDE1-202ENST00000339438 JMJD7-PLA2G4BH0Y9G9 81 aa3.85□□□□□ -1.79
CSDE1-202ENST00000339438 NDUFC1O43677 76 aa3.85□□□□□ -1.79
CSDE1-202ENST00000339438 ATP5EP56381 51 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-202ENST00000339438 IGHV3-53P01767 116 aa3.84□□□□□ -1.79
CSDE1-202ENST00000339438 LINC01006Q8NI28 216 aa3.84□□□□□ -1.79
CSDE1-202ENST00000339438 CDC42SE2Q9NRR3 84 aa3.84□□□□□ -1.79
CSDE1-202ENST00000339438 TRBV6-4A0A1B0GX49 114 aa3.84□□□□□ -1.79
CSDE1-202ENST00000339438 SPINK13Q1W4C9 94 aa3.84□□□□□ -1.79
CSDE1-202ENST00000339438 USMG5Q96IX5 58 aa3.84□□□□□ -1.79
CSDE1-202ENST00000339438 A8MTW9 85 aa3.84□□□□□ -1.8
CSDE1-202ENST00000339438 PMAIP1Q13794 54 aa3.84□□□□□ -1.8
CSDE1-202ENST00000339438 PLAC8L1A1L4L8 177 aa3.83□□□□□ -1.8
CSDE1-202ENST00000339438 DYNLRB2Q8TF09 96 aa3.83□□□□□ -1.8
CSDE1-202ENST00000339438 ERC2-IT1O76042 136 aa3.83□□□□□ -1.8
CSDE1-202ENST00000339438 SNRPD3P62318 126 aaKnown RBP3.83□□□□□ -1.8
CSDE1-202ENST00000339438 CXCL6P80162 114 aa3.83□□□□□ -1.8
CSDE1-202ENST00000339438 RBM3P98179 157 aaKnown RBP3.83□□□□□ -1.8
CSDE1-202ENST00000339438 Q6ZRP5 223 aa3.83□□□□□ -1.8
CSDE1-202ENST00000339438 Q6ZVQ6 151 aa3.83□□□□□ -1.8
CSDE1-202ENST00000339438 MGAM2Q2M2H8 2515 aa3.83□□□□□ -1.8
CSDE1-202ENST00000339438 K7EQD1 137 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 Q8N3U1 123 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 MPLKIPQ8TAP9 179 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 K7EMT4 169 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 C9orf66Q5T8R8 295 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 C6orf223Q8N319 242 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 TMEM256-PLSCR3K7ERE1 68 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 ESRGQ1W209 222 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 Q8NDZ9 215 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 UBL5Q9BZL1 73 aa3.82□□□□□ -1.8
CSDE1-202ENST00000339438 Q1T7F1 81 aa3.81□□□□□ -1.8
CSDE1-202ENST00000339438 TMEM254Q8TBM7 123 aa3.81□□□□□ -1.8
CSDE1-202ENST00000339438 OCR1Q9BZK8 76 aa3.81□□□□□ -1.8
CSDE1-202ENST00000339438 CCL24O00175 119 aa3.81□□□□□ -1.8
CSDE1-202ENST00000339438 COX7B2Q8TF08 81 aa3.81□□□□□ -1.8
CSDE1-202ENST00000339438 UBE2E2Q96LR5 201 aa3.81□□□□□ -1.8
CSDE1-202ENST00000339438 A8MU10 97 aa3.81□□□□□ -1.8
CSDE1-202ENST00000339438 hDV103S1A0JD37 113 aa3.8□□□□□ -1.8
CSDE1-202ENST00000339438 A0A087WZ39 114 aa3.8□□□□□ -1.8
CSDE1-202ENST00000339438 IGHV3OR16-9A0A0B4J2B5 98 aa3.8□□□□□ -1.8
CSDE1-202ENST00000339438 LCE6AA0A183 80 aa3.8□□□□□ -1.8
CSDE1-202ENST00000339438 DEFB131AP59861 70 aa3.8□□□□□ -1.8
CSDE1-202ENST00000339438 WFDC10AQ9H1F0 79 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms