RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 NMUP48645 174 aa7.98□□□□□ -1.13
SRSF3-201ENST00000339436 SNRPEP62304 92 aaKnown RBP7.98□□□□□ -1.13
SRSF3-201ENST00000339436 MEIG1Q5JSS6 88 aa7.98□□□□□ -1.13
SRSF3-201ENST00000339436 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
SRSF3-201ENST00000339436 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
SRSF3-201ENST00000339436 DMBT1Q9UGM3 2413 aaPredicted RBP7.97□□□□□ -1.13
SRSF3-201ENST00000339436 C5orf52A6NGY3 159 aa7.97□□□□□ -1.13
SRSF3-201ENST00000339436 HNRNPA3P51991 378 aaKnown RBP7.97□□□□□ -1.13
SRSF3-201ENST00000339436 LINC00158P58513 81 aa7.97□□□□□ -1.13
SRSF3-201ENST00000339436 TP73-AS1Q9UF72 201 aa7.97□□□□□ -1.13
SRSF3-201ENST00000339436 SMIM13P0DJ93 91 aa7.96□□□□□ -1.14
SRSF3-201ENST00000339436 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
SRSF3-201ENST00000339436 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
SRSF3-201ENST00000339436 LINC00587B1AMM8 73 aa7.95□□□□□ -1.14
SRSF3-201ENST00000339436 AKR1D1P51857 326 aa7.95□□□□□ -1.14
SRSF3-201ENST00000339436 KRTAP11-1Q8IUC1 163 aa7.95□□□□□ -1.14
SRSF3-201ENST00000339436 PSORS1C2Q9UIG4 136 aa7.95□□□□□ -1.14
SRSF3-201ENST00000339436 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
SRSF3-201ENST00000339436 IGKV2D-26A0A0A0MRZ7 120 aa7.94□□□□□ -1.14
SRSF3-201ENST00000339436 MRPL55Q7Z7F7 128 aaKnown RBP7.94□□□□□ -1.14
SRSF3-201ENST00000339436 ATOH7Q8N100 152 aa7.94□□□□□ -1.14
SRSF3-201ENST00000339436 VPREB1P12018 145 aa7.93□□□□□ -1.14
SRSF3-201ENST00000339436 UBE2BP63146 152 aa7.93□□□□□ -1.14
SRSF3-201ENST00000339436 MIR7-3HGQ8N6C7 128 aa7.93□□□□□ -1.14
SRSF3-201ENST00000339436 LBHQ53QV2 105 aaPredicted RBP7.93□□□□□ -1.14
SRSF3-201ENST00000339436 NKAPP1Q8N9T2 125 aa7.93□□□□□ -1.14
SRSF3-201ENST00000339436 Q8NDZ9 215 aa7.93□□□□□ -1.14
SRSF3-201ENST00000339436 A0A0J9YXY3 114 aa7.92□□□□□ -1.14
SRSF3-201ENST00000339436 ANKRD39Q53RE8 183 aa7.92□□□□□ -1.14
SRSF3-201ENST00000339436 RPL24P83731 157 aaKnown RBP7.91□□□□□ -1.14
SRSF3-201ENST00000339436 C1orf137Q5JT78 98 aa7.91□□□□□ -1.14
SRSF3-201ENST00000339436 DAND5Q8N907 189 aa7.91□□□□□ -1.14
SRSF3-201ENST00000339436 ZNF815PA8K554 130 aa7.9□□□□□ -1.14
SRSF3-201ENST00000339436 LINC00167Q96N53 147 aa7.9□□□□□ -1.14
SRSF3-201ENST00000339436 TTTY13Q9BZ97 58 aa7.9□□□□□ -1.14
SRSF3-201ENST00000339436 GAGE10A6NGK3 116 aa7.89□□□□□ -1.15
SRSF3-201ENST00000339436 BOD1L2Q8IYS8 172 aa7.88□□□□□ -1.15
SRSF3-201ENST00000339436 LOC107984156A0A0G2JMH3 177 aa7.88□□□□□ -1.15
SRSF3-201ENST00000339436 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
SRSF3-201ENST00000339436 ARL17AQ8IVW1 177 aa7.88□□□□□ -1.15
SRSF3-201ENST00000339436 TIMM17BO60830 172 aa7.87□□□□□ -1.15
SRSF3-201ENST00000339436 IGLV7-43P04211 117 aa7.87□□□□□ -1.15
SRSF3-201ENST00000339436 SRSF9Q13242 221 aaKnown RBP eCLIP7.87□□□□□ -1.15
SRSF3-201ENST00000339436 ADAMTSL4-AS1Q5T5F5 129 aa7.87□□□□□ -1.15
SRSF3-201ENST00000339436 SPINK6Q6UWN8 80 aa7.87□□□□□ -1.15
SRSF3-201ENST00000339436 LITAFQ99732 161 aa7.87□□□□□ -1.15
SRSF3-201ENST00000339436 HERC1Q15751 4861 aa7.86□□□□□ -1.15
SRSF3-201ENST00000339436 HSBP1L1C9JCN9 74 aa7.86□□□□□ -1.15
SRSF3-201ENST00000339436 SCGB1D1O95968 90 aa7.86□□□□□ -1.15
SRSF3-201ENST00000339436 PCP2Q8IVA1 136 aa7.86□□□□□ -1.15
SRSF3-201ENST00000339436 MIEN1Q9BRT3 115 aa7.86□□□□□ -1.15
SRSF3-201ENST00000339436 TMA7Q9Y2S6 64 aaKnown RBP7.86□□□□□ -1.15
SRSF3-201ENST00000339436 IGKV2-28A0A075B6P5 120 aa7.85□□□□□ -1.15
SRSF3-201ENST00000339436 IGKV2D-28P01615 120 aa7.85□□□□□ -1.15
SRSF3-201ENST00000339436 IGLV1-50A0A075B6I6 118 aa7.84□□□□□ -1.15
SRSF3-201ENST00000339436 KRTAP29-1A8MX34 341 aaPredicted RBP7.84□□□□□ -1.15
SRSF3-201ENST00000339436 NCR3O14931 201 aa7.84□□□□□ -1.15
SRSF3-201ENST00000339436 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
SRSF3-201ENST00000339436 M0R378 163 aa7.83□□□□□ -1.16
SRSF3-201ENST00000339436 EIF4EBP3O60516 100 aaPredicted RBP7.83□□□□□ -1.16
SRSF3-201ENST00000339436 BCE1O60756 84 aa7.83□□□□□ -1.16
SRSF3-201ENST00000339436 NPC2P61916 151 aa7.83□□□□□ -1.16
SRSF3-201ENST00000339436 SCGB1D4Q6XE38 83 aa7.83□□□□□ -1.16
SRSF3-201ENST00000339436 TNXBP22105 4242 aa7.83□□□□□ -1.16
SRSF3-201ENST00000339436 TMEM238C9JI98 176 aa7.82□□□□□ -1.16
SRSF3-201ENST00000339436 NDUFC2O95298 119 aa7.82□□□□□ -1.16
SRSF3-201ENST00000339436 OXTP01178 125 aa7.82□□□□□ -1.16
SRSF3-201ENST00000339436 LINC00308Q8TCZ7 52 aa7.82□□□□□ -1.16
SRSF3-201ENST00000339436 SPANXB1Q9NS25 103 aaPredicted RBP7.82□□□□□ -1.16
SRSF3-201ENST00000339436 TRBV10-2A0A0K0K1G8 114 aa7.81□□□□□ -1.16
SRSF3-201ENST00000339436 DIRC1Q969H9 104 aa7.81□□□□□ -1.16
SRSF3-201ENST00000339436 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
SRSF3-201ENST00000339436 H0Y9J4 135 aa7.8□□□□□ -1.16
SRSF3-201ENST00000339436 ZNF861PO60384 105 aa7.8□□□□□ -1.16
SRSF3-201ENST00000339436 REG3GQ6UW15 175 aa7.8□□□□□ -1.16
SRSF3-201ENST00000339436 SPANXDQ9BXN6 97 aa7.8□□□□□ -1.16
SRSF3-201ENST00000339436 SPANXCQ9NY87 97 aa7.8□□□□□ -1.16
SRSF3-201ENST00000339436 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
SRSF3-201ENST00000339436 JOSD1Q15040 202 aaPredicted RBP7.79□□□□□ -1.16
SRSF3-201ENST00000339436 KRTAP13-1Q8IUC0 172 aa7.79□□□□□ -1.16
SRSF3-201ENST00000339436 J3QL48 77 aa7.78□□□□□ -1.16
SRSF3-201ENST00000339436 PRYO14603 147 aa7.78□□□□□ -1.16
SRSF3-201ENST00000339436 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
SRSF3-201ENST00000339436 KCNQ1DNQ9H478 68 aa7.78□□□□□ -1.16
SRSF3-201ENST00000339436 DDTP30046 118 aa7.77□□□□□ -1.17
SRSF3-201ENST00000339436 UBE2AP49459 152 aa7.77□□□□□ -1.17
SRSF3-201ENST00000339436 Q6ZVH6 145 aa7.77□□□□□ -1.17
SRSF3-201ENST00000339436 PPDPFQ9H3Y8 114 aa7.77□□□□□ -1.17
SRSF3-201ENST00000339436 IGLV6-57P01721 117 aa7.76□□□□□ -1.17
SRSF3-201ENST00000339436 SPRR1AP35321 89 aa7.76□□□□□ -1.17
SRSF3-201ENST00000339436 PRLHP81277 87 aa7.76□□□□□ -1.17
SRSF3-201ENST00000339436 FAM19A1Q7Z5A9 133 aa7.76□□□□□ -1.17
SRSF3-201ENST00000339436 COPS9Q8WXC6 57 aa7.76□□□□□ -1.17
SRSF3-201ENST00000339436 LINC01600Q96MT4 127 aa7.76□□□□□ -1.17
SRSF3-201ENST00000339436 VAMP8Q9BV40 100 aa7.76□□□□□ -1.17
SRSF3-201ENST00000339436 PAM16Q9Y3D7 125 aa7.76□□□□□ -1.17
SRSF3-201ENST00000339436 MT1HL1P0DM35 61 aa7.75□□□□□ -1.17
SRSF3-201ENST00000339436 COX8AP10176 69 aa7.75□□□□□ -1.17
SRSF3-201ENST00000339436 IFITM1P13164 125 aa7.75□□□□□ -1.17
SRSF3-201ENST00000339436 S100A12P80511 92 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms