RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 Q8N814 137 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 SERP1Q9Y6X1 66 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 C2orf48Q96LS8 159 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 C3orf84H3BNL1 204 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 UPK3BQ9BT76 320 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 A0A096LNI7 61 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 FAM19A3Q7Z5A8 133 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 A0A1B0GW54 56 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 EIF4EBP3O60516 100 aaPredicted RBP4.31□□□□□ -1.72
PRKDC-202ENST00000338368 TRBV7-7A0A0K0K1E9 115 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 STAB1Q9NY15 2570 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 LINC01556Q5JQF7 62 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 FAM229AH3BQW9 127 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 USP17L23D6RBM5 183 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 ENHOQ6UWT2 76 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 LINC00612Q8N6U2 182 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 M0R2N4 97 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 LINC00575Q6W349 94 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 SCXQ7RTU7 201 aa4.31□□□□□ -1.72
PRKDC-202ENST00000338368 BPY2O14599 106 aa4.3□□□□□ -1.72
PRKDC-202ENST00000338368 Q6JHZ5 121 aa4.3□□□□□ -1.72
PRKDC-202ENST00000338368 LRCOL1A6NCL2 159 aa4.3□□□□□ -1.72
PRKDC-202ENST00000338368 LY6G6CO95867 125 aa4.29□□□□□ -1.72
PRKDC-202ENST00000338368 CDIP1Q9H305 208 aa4.29□□□□□ -1.72
PRKDC-202ENST00000338368 BCE1O60756 84 aa4.29□□□□□ -1.72
PRKDC-202ENST00000338368 TEX15Q9BXT5 2789 aa4.28□□□□□ -1.72
PRKDC-202ENST00000338368 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
PRKDC-202ENST00000338368 C1orf134Q5TEV5 83 aa4.28□□□□□ -1.72
PRKDC-202ENST00000338368 PLA2G1BP04054 148 aaKnown RBP4.28□□□□□ -1.72
PRKDC-202ENST00000338368 GCN1Q92616 2671 aaKnown RBP4.28□□□□□ -1.72
PRKDC-202ENST00000338368 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
PRKDC-202ENST00000338368 FAM218AQ96MZ4 157 aa4.28□□□□□ -1.72
PRKDC-202ENST00000338368 MGAM2Q2M2H8 2515 aa4.28□□□□□ -1.72
PRKDC-202ENST00000338368 C6orf48Q9UBA6 75 aa4.27□□□□□ -1.73
PRKDC-202ENST00000338368 PRUNE2Q8WUY3 3088 aa4.27□□□□□ -1.73
PRKDC-202ENST00000338368 BAHCC1Q9P281 2608 aa4.27□□□□□ -1.73
PRKDC-202ENST00000338368 KIAA0087Q14695 138 aa4.27□□□□□ -1.73
PRKDC-202ENST00000338368 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
PRKDC-202ENST00000338368 CXCL6P80162 114 aa4.27□□□□□ -1.73
PRKDC-202ENST00000338368 A0A087WVE0 104 aa4.26□□□□□ -1.73
PRKDC-202ENST00000338368 KRTAP10-11P60412 298 aa4.26□□□□□ -1.73
PRKDC-202ENST00000338368 CRYGAP11844 174 aa4.26□□□□□ -1.73
PRKDC-202ENST00000338368 H0Y9J4 135 aa4.26□□□□□ -1.73
PRKDC-202ENST00000338368 WWC2-AS2Q96NR7 200 aa4.26□□□□□ -1.73
PRKDC-202ENST00000338368 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
PRKDC-202ENST00000338368 FAM104AQ969W3 186 aa4.25□□□□□ -1.73
PRKDC-202ENST00000338368 LINC00336Q6ZUF6 198 aa4.25□□□□□ -1.73
PRKDC-202ENST00000338368 LINC00846Q9NV44 126 aa4.25□□□□□ -1.73
PRKDC-202ENST00000338368 C22orf24Q9Y442 160 aa4.25□□□□□ -1.73
PRKDC-202ENST00000338368 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
PRKDC-202ENST00000338368 PRR34Q9NV39 138 aa4.25□□□□□ -1.73
PRKDC-202ENST00000338368 USP34Q70CQ2 3546 aa4.25□□□□□ -1.73
PRKDC-202ENST00000338368 SPEGQ15772 3267 aa4.25□□□□□ -1.73
PRKDC-202ENST00000338368 LINC00588Q9Y4M8 146 aa4.24□□□□□ -1.73
PRKDC-202ENST00000338368 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
PRKDC-202ENST00000338368 GVQW2A0A096LPI5 108 aaPredicted RBP4.24□□□□□ -1.73
PRKDC-202ENST00000338368 A0A0C4DFX4 3053 aa4.24□□□□□ -1.73
PRKDC-202ENST00000338368 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
PRKDC-202ENST00000338368 UNC79Q9P2D8 2635 aa4.24□□□□□ -1.73
PRKDC-202ENST00000338368 CELSR3Q9NYQ7 3312 aa4.24□□□□□ -1.73
PRKDC-202ENST00000338368 C1orf137Q5JT78 98 aa4.23□□□□□ -1.73
PRKDC-202ENST00000338368 LINC00167Q96N53 147 aa4.23□□□□□ -1.73
PRKDC-202ENST00000338368 ZNF292O60281 2723 aa4.23□□□□□ -1.73
PRKDC-202ENST00000338368 PRYO14603 147 aa4.23□□□□□ -1.73
PRKDC-202ENST00000338368 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
PRKDC-202ENST00000338368 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
PRKDC-202ENST00000338368 IGKV4-1P06312 121 aa4.23□□□□□ -1.73
PRKDC-202ENST00000338368 ELOF1P60002 83 aaKnown RBP4.23□□□□□ -1.73
PRKDC-202ENST00000338368 NBEAL1Q6ZS30 2694 aa4.22□□□□□ -1.73
PRKDC-202ENST00000338368 WDFY4Q6ZS81 3184 aa4.22□□□□□ -1.73
PRKDC-202ENST00000338368 VPREB1P12018 145 aa4.22□□□□□ -1.73
PRKDC-202ENST00000338368 Q6ZRP5 223 aa4.22□□□□□ -1.73
PRKDC-202ENST00000338368 MDFIQ99750 246 aa4.21□□□□□ -1.73
PRKDC-202ENST00000338368 EYSQ5T1H1 3165 aa4.21□□□□□ -1.74
PRKDC-202ENST00000338368 K7EIL1 84 aa4.21□□□□□ -1.74
PRKDC-202ENST00000338368 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
PRKDC-202ENST00000338368 Q6ZVQ6 151 aa4.2□□□□□ -1.74
PRKDC-202ENST00000338368 DNAH10OSP0CZ25 163 aa4.2□□□□□ -1.74
PRKDC-202ENST00000338368 TRBV7-6A0A0J9YX20 115 aa4.2□□□□□ -1.74
PRKDC-202ENST00000338368 IGLV6-57P01721 117 aa4.19□□□□□ -1.74
PRKDC-202ENST00000338368 SMCR5Q8TEV8 140 aa4.19□□□□□ -1.74
PRKDC-202ENST00000338368 MYO15AQ9UKN7 3530 aa4.19□□□□□ -1.74
PRKDC-202ENST00000338368 SETXQ7Z333 2677 aaKnown RBP4.19□□□□□ -1.74
PRKDC-202ENST00000338368 A0A087WSZ3 146 aa4.19□□□□□ -1.74
PRKDC-202ENST00000338368 PRLHP81277 87 aa4.19□□□□□ -1.74
PRKDC-202ENST00000338368 TP53AIP1Q9HCN2 124 aa4.18□□□□□ -1.74
PRKDC-202ENST00000338368 IGLV9-49A0A0B4J1Y8 123 aa4.18□□□□□ -1.74
PRKDC-202ENST00000338368 TM2D3Q9BRN9 247 aa4.18□□□□□ -1.74
PRKDC-202ENST00000338368 LINC01547P58512 204 aaPredicted RBP4.18□□□□□ -1.74
PRKDC-202ENST00000338368 WIPF1O43516 503 aa4.18□□□□□ -1.74
PRKDC-202ENST00000338368 C1orf195Q5TG92 126 aa4.18□□□□□ -1.74
PRKDC-202ENST00000338368 SPAG11AQ6PDA7 123 aa4.18□□□□□ -1.74
PRKDC-202ENST00000338368 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
PRKDC-202ENST00000338368 NOTCH1P46531 2555 aa4.17□□□□□ -1.74
PRKDC-202ENST00000338368 WFDC13Q8IUB5 93 aa4.17□□□□□ -1.74
PRKDC-202ENST00000338368 TEP1Q99973 2627 aaKnown RBP4.17□□□□□ -1.74
PRKDC-202ENST00000338368 C15orf56Q8N910 161 aa4.17□□□□□ -1.74
PRKDC-202ENST00000338368 Q9BRP9 147 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms