RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 LINC00482Q8N8I6 264 aa7.08□□□□□ -1.28
HIF1A-202ENST00000337138 TMEM256-PLSCR3K7ERE1 68 aa7.08□□□□□ -1.28
HIF1A-202ENST00000337138 NDUFC2O95298 119 aa7.08□□□□□ -1.28
HIF1A-202ENST00000337138 RPL28P46779 137 aaKnown RBP7.08□□□□□ -1.28
HIF1A-202ENST00000337138 C16orf74Q96GX8 76 aa7.08□□□□□ -1.28
HIF1A-202ENST00000337138 NSD1Q96L73 2696 aaPredicted RBP7.08□□□□□ -1.28
HIF1A-202ENST00000337138 F8WEM9 126 aa7.08□□□□□ -1.28
HIF1A-202ENST00000337138 IGHV4-28A0A0C4DH34 117 aa7.07□□□□□ -1.28
HIF1A-202ENST00000337138 LINC00269Q8N2A0 174 aa7.07□□□□□ -1.28
HIF1A-202ENST00000337138 FHL2Q14192 279 aa7.06□□□□□ -1.28
HIF1A-202ENST00000337138 CYSTM1Q9H1C7 97 aa7.06□□□□□ -1.28
HIF1A-202ENST00000337138 LINC01006Q8NI28 216 aa7.06□□□□□ -1.28
HIF1A-202ENST00000337138 RMI2Q96E14 147 aa7.06□□□□□ -1.28
HIF1A-202ENST00000337138 LINC00959A0A1B0GUT2 108 aa7.05□□□□□ -1.28
HIF1A-202ENST00000337138 DEFB135Q30KP9 77 aa7.04□□□□□ -1.28
HIF1A-202ENST00000337138 LRCOL1A6NCL2 159 aa7.04□□□□□ -1.28
HIF1A-202ENST00000337138 CCKP06307 115 aa7.04□□□□□ -1.28
HIF1A-202ENST00000337138 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
HIF1A-202ENST00000337138 LINC01561Q8N1V8 128 aa7.04□□□□□ -1.28
HIF1A-202ENST00000337138 IGHV3OR16-9A0A0B4J2B5 98 aa7.03□□□□□ -1.28
HIF1A-202ENST00000337138 IBA57-AS1B1ANH7 110 aa7.03□□□□□ -1.28
HIF1A-202ENST00000337138 DEFB105AQ8NG35 78 aa7.03□□□□□ -1.28
HIF1A-202ENST00000337138 TRBV6-4A0A1B0GX49 114 aa7.03□□□□□ -1.28
HIF1A-202ENST00000337138 C19orf73Q9NVV2 129 aa7.03□□□□□ -1.28
HIF1A-202ENST00000337138 Q6ZQY7 126 aa7.02□□□□□ -1.29
HIF1A-202ENST00000337138 CSNK1G2-AS1Q8NCQ2 148 aa7.02□□□□□ -1.29
HIF1A-202ENST00000337138 ATP5EP2Q5VTU8 51 aa7.01□□□□□ -1.29
HIF1A-202ENST00000337138 A0A087WZ39 114 aa7□□□□□ -1.29
HIF1A-202ENST00000337138 UBE2DNLQ8IWF7 75 aa7□□□□□ -1.29
HIF1A-202ENST00000337138 C6orf223Q8N319 242 aa7□□□□□ -1.29
HIF1A-202ENST00000337138 C2orf48Q96LS8 159 aa7□□□□□ -1.29
HIF1A-202ENST00000337138 NDUFC2-KCTD14E9PQ53 114 aa7□□□□□ -1.29
HIF1A-202ENST00000337138 PRR4Q16378 134 aa7□□□□□ -1.29
HIF1A-202ENST00000337138 XAGE1AQ9HD64 81 aa7□□□□□ -1.29
HIF1A-202ENST00000337138 KRTAP1-1Q07627 177 aa6.99□□□□□ -1.29
HIF1A-202ENST00000337138 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
HIF1A-202ENST00000337138 CHCHD10Q8WYQ3 142 aaPredicted RBP6.99□□□□□ -1.29
HIF1A-202ENST00000337138 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
HIF1A-202ENST00000337138 Q8N814 137 aa6.99□□□□□ -1.29
HIF1A-202ENST00000337138 V9GYY9 64 aa6.99□□□□□ -1.29
HIF1A-202ENST00000337138 KLK12Q9UKR0 248 aa6.98□□□□□ -1.29
HIF1A-202ENST00000337138 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
HIF1A-202ENST00000337138 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
HIF1A-202ENST00000337138 C1orf195Q5TG92 126 aa6.98□□□□□ -1.29
HIF1A-202ENST00000337138 LINC00336Q6ZUF6 198 aa6.98□□□□□ -1.29
HIF1A-202ENST00000337138 NREPQ16612 68 aa6.98□□□□□ -1.29
HIF1A-202ENST00000337138 TRAV7A0A075B6U4 112 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 HIVEP1P15822 2718 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 IGLV1-51P01701 117 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 REG3AQ06141 175 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 UNQ6190/PRO20217Q6UXQ8 127 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 PRO0255Q9UI72 69 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 TENM1Q9UKZ4 2725 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 Q8N9L7 120 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 OBSCN-AS1Q96MR7 158 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
HIF1A-202ENST00000337138 C3orf84H3BNL1 204 aa6.96□□□□□ -1.29
HIF1A-202ENST00000337138 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.29
HIF1A-202ENST00000337138 DNAH9Q9NYC9 4486 aa6.96□□□□□ -1.3
HIF1A-202ENST00000337138 KMT2BQ9UMN6 2715 aaPredicted RBP6.96□□□□□ -1.3
HIF1A-202ENST00000337138 MIFP14174 115 aa6.95□□□□□ -1.3
HIF1A-202ENST00000337138 CMC4P56277 68 aaPredicted RBP6.95□□□□□ -1.3
HIF1A-202ENST00000337138 SPAG11BQ08648 103 aa6.95□□□□□ -1.3
HIF1A-202ENST00000337138 FUSP35637 526 aaKnown RBP eCLIP6.95□□□□□ -1.3
HIF1A-202ENST00000337138 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
HIF1A-202ENST00000337138 HIGD2BQ4VC39 106 aa6.95□□□□□ -1.3
HIF1A-202ENST00000337138 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
HIF1A-202ENST00000337138 CELA1Q9UNI1 258 aa6.95□□□□□ -1.3
HIF1A-202ENST00000337138 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
HIF1A-202ENST00000337138 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
HIF1A-202ENST00000337138 LINC01547P58512 204 aaPredicted RBP6.94□□□□□ -1.3
HIF1A-202ENST00000337138 SPATA3Q8NHX4 192 aa6.94□□□□□ -1.3
HIF1A-202ENST00000337138 TRBV7-6A0A0J9YX20 115 aa6.94□□□□□ -1.3
HIF1A-202ENST00000337138 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
HIF1A-202ENST00000337138 Q6ZVQ6 151 aa6.94□□□□□ -1.3
HIF1A-202ENST00000337138 LINC00612Q8N6U2 182 aa6.94□□□□□ -1.3
HIF1A-202ENST00000337138 DIRC1Q969H9 104 aa6.94□□□□□ -1.3
HIF1A-202ENST00000337138 OXTP01178 125 aa6.92□□□□□ -1.3
HIF1A-202ENST00000337138 DNAH10Q8IVF4 4471 aa6.92□□□□□ -1.3
HIF1A-202ENST00000337138 BPY2O14599 106 aa6.92□□□□□ -1.3
HIF1A-202ENST00000337138 Q8IZM0 81 aa6.92□□□□□ -1.3
HIF1A-202ENST00000337138 NANOS2P60321 138 aaKnown RBP6.91□□□□□ -1.3
HIF1A-202ENST00000337138 CYSRT1A8MQ03 144 aa6.91□□□□□ -1.3
HIF1A-202ENST00000337138 CD164L2Q6UWJ8 174 aa6.91□□□□□ -1.3
HIF1A-202ENST00000337138 TM2D3Q9BRN9 247 aa6.91□□□□□ -1.3
HIF1A-202ENST00000337138 COX7BP24311 80 aa6.9□□□□□ -1.31
HIF1A-202ENST00000337138 Q8NDZ9 215 aa6.9□□□□□ -1.31
HIF1A-202ENST00000337138 TMEM254Q8TBM7 123 aa6.89□□□□□ -1.31
HIF1A-202ENST00000337138 M0R2N4 97 aa6.89□□□□□ -1.31
HIF1A-202ENST00000337138 CAMK2N2Q96S95 79 aa6.89□□□□□ -1.31
HIF1A-202ENST00000337138 FAM30AQ9NZY2 134 aa6.89□□□□□ -1.31
HIF1A-202ENST00000337138 X6R8D5 127 aa6.89□□□□□ -1.31
HIF1A-202ENST00000337138 PSPHP1O15172 72 aa6.88□□□□□ -1.31
HIF1A-202ENST00000337138 PDE6GP18545 87 aa6.88□□□□□ -1.31
HIF1A-202ENST00000337138 SPTSSBQ8NFR3 76 aa6.88□□□□□ -1.31
HIF1A-202ENST00000337138 NDUFC1O43677 76 aa6.87□□□□□ -1.31
HIF1A-202ENST00000337138 LINC00167Q96N53 147 aa6.87□□□□□ -1.31
HIF1A-202ENST00000337138 C16orf95Q9H693 158 aa6.87□□□□□ -1.31
HIF1A-202ENST00000337138 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms