RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 CRYGAP11844 174 aa11.72□□□□□ -0.53
PDZD8-201ENST00000334464 ACYP2P14621 99 aa11.72□□□□□ -0.53
PDZD8-201ENST00000334464 FLNAP21333 2647 aaKnown RBP11.72□□□□□ -0.53
PDZD8-201ENST00000334464 H3BNG1 76 aa11.72□□□□□ -0.53
PDZD8-201ENST00000334464 A0A087WVE0 104 aa11.71□□□□□ -0.54
PDZD8-201ENST00000334464 PCOTHQ58A44 107 aa11.71□□□□□ -0.54
PDZD8-201ENST00000334464 FHL3Q13643 280 aa11.71□□□□□ -0.54
PDZD8-201ENST00000334464 COL4A2P08572 1712 aa11.7□□□□□ -0.54
PDZD8-201ENST00000334464 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
PDZD8-201ENST00000334464 SPINK1P00995 79 aa11.69□□□□□ -0.54
PDZD8-201ENST00000334464 PRLHP81277 87 aa11.69□□□□□ -0.54
PDZD8-201ENST00000334464 URB1-AS1Q96HZ7 61 aa11.69□□□□□ -0.54
PDZD8-201ENST00000334464 C10orf142B7Z368 130 aa11.68□□□□□ -0.54
PDZD8-201ENST00000334464 IGKV2D-30A0A075B6S6 120 aa11.67□□□□□ -0.54
PDZD8-201ENST00000334464 IGKV2-30P06310 120 aa11.67□□□□□ -0.54
PDZD8-201ENST00000334464 CDSNQ15517 529 aa11.66□□□□□ -0.54
PDZD8-201ENST00000334464 Q6ZRU5 148 aa11.65□□□□□ -0.54
PDZD8-201ENST00000334464 A0A1B0GU69 56 aa11.65□□□□□ -0.54
PDZD8-201ENST00000334464 LINC00846Q9NV44 126 aa11.65□□□□□ -0.54
PDZD8-201ENST00000334464 C22orf24Q9Y442 160 aa11.64□□□□□ -0.55
PDZD8-201ENST00000334464 CDIP1Q9H305 208 aa11.64□□□□□ -0.55
PDZD8-201ENST00000334464 CR1P17927 2039 aa11.64□□□□□ -0.55
PDZD8-201ENST00000334464 C11orf72Q8NBR9 251 aa11.64□□□□□ -0.55
PDZD8-201ENST00000334464 HELZ2Q9BYK8 2649 aaKnown RBP11.63□□□□□ -0.55
PDZD8-201ENST00000334464 SMR3AQ99954 134 aa11.63□□□□□ -0.55
PDZD8-201ENST00000334464 EDN2P20800 178 aa11.63□□□□□ -0.55
PDZD8-201ENST00000334464 IGHV3OR16-9A0A0B4J2B5 98 aa11.63□□□□□ -0.55
PDZD8-201ENST00000334464 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
PDZD8-201ENST00000334464 RETNLBQ9BQ08 111 aa11.62□□□□□ -0.55
PDZD8-201ENST00000334464 A0A096LNJ9 63 aa11.62□□□□□ -0.55
PDZD8-201ENST00000334464 Q6ZSN1 163 aa11.62□□□□□ -0.55
PDZD8-201ENST00000334464 IGLV5-45A0A087WSX0 123 aa11.62□□□□□ -0.55
PDZD8-201ENST00000334464 SMCR5Q8TEV8 140 aa11.61□□□□□ -0.55
PDZD8-201ENST00000334464 STAB1Q9NY15 2570 aa11.61□□□□□ -0.55
PDZD8-201ENST00000334464 RPS28P62857 69 aaKnown RBP11.61□□□□□ -0.55
PDZD8-201ENST00000334464 C6orf48Q9UBA6 75 aa11.61□□□□□ -0.55
PDZD8-201ENST00000334464 C4orf26Q17RF5 130 aa11.61□□□□□ -0.55
PDZD8-201ENST00000334464 LOC110117498A0A087WWA1 95 aa11.61□□□□□ -0.55
PDZD8-201ENST00000334464 SPAG11AQ6PDA7 123 aa11.6□□□□□ -0.55
PDZD8-201ENST00000334464 MOBPQ13875 183 aa11.58□□□□□ -0.56
PDZD8-201ENST00000334464 Q8NBF4 154 aa11.58□□□□□ -0.56
PDZD8-201ENST00000334464 CFAP46Q8IYW2 2715 aa11.58□□□□□ -0.56
PDZD8-201ENST00000334464 KIAA0087Q14695 138 aa11.57□□□□□ -0.56
PDZD8-201ENST00000334464 TRAV22A0A0B4J277 110 aa11.57□□□□□ -0.56
PDZD8-201ENST00000334464 Q6ZRX8 168 aa11.57□□□□□ -0.56
PDZD8-201ENST00000334464 SPATA3Q8NHX4 192 aa11.57□□□□□ -0.56
PDZD8-201ENST00000334464 ELOF1P60002 83 aaKnown RBP11.56□□□□□ -0.56
PDZD8-201ENST00000334464 MDFIQ99750 246 aa11.56□□□□□ -0.56
PDZD8-201ENST00000334464 A8MTW9 85 aa11.56□□□□□ -0.56
PDZD8-201ENST00000334464 KRTAP10-9P60411 292 aa11.56□□□□□ -0.56
PDZD8-201ENST00000334464 ITPR3Q14573 2671 aa11.55□□□□□ -0.56
PDZD8-201ENST00000334464 DEFB116Q30KQ4 102 aa11.55□□□□□ -0.56
PDZD8-201ENST00000334464 SMIM29Q86T20 159 aa11.55□□□□□ -0.56
PDZD8-201ENST00000334464 Q6ZRP5 223 aa11.54□□□□□ -0.56
PDZD8-201ENST00000334464 FAM19A4Q96LR4 140 aa11.54□□□□□ -0.56
PDZD8-201ENST00000334464 FAM229AH3BQW9 127 aa11.54□□□□□ -0.56
PDZD8-201ENST00000334464 C16orf90A8MZG2 172 aa11.53□□□□□ -0.56
PDZD8-201ENST00000334464 SPACA4Q8TDM5 124 aa11.52□□□□□ -0.56
PDZD8-201ENST00000334464 LINC00167Q96N53 147 aa11.52□□□□□ -0.57
PDZD8-201ENST00000334464 LINC00313P59037 77 aa11.51□□□□□ -0.57
PDZD8-201ENST00000334464 NBEAL1Q6ZS30 2694 aa11.5□□□□□ -0.57
PDZD8-201ENST00000334464 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
PDZD8-201ENST00000334464 LOC101927531A0A1B0GV80 90 aa11.48□□□□□ -0.57
PDZD8-201ENST00000334464 A0A1W2PPR1 153 aa11.47□□□□□ -0.57
PDZD8-201ENST00000334464 C8orf87E5RJ46 101 aa11.47□□□□□ -0.57
PDZD8-201ENST00000334464 Q6ZQT0 140 aa11.47□□□□□ -0.57
PDZD8-201ENST00000334464 TRBV7-4A0A0J9YYF1 115 aa11.46□□□□□ -0.58
PDZD8-201ENST00000334464 ERC2-IT1O76042 136 aa11.46□□□□□ -0.58
PDZD8-201ENST00000334464 TYMSOSQ8TAI1 123 aa11.43□□□□□ -0.58
PDZD8-201ENST00000334464 PLA2G1BP04054 148 aaKnown RBP11.43□□□□□ -0.58
PDZD8-201ENST00000334464 ATP11AUNQ6ZP68 121 aa11.43□□□□□ -0.58
PDZD8-201ENST00000334464 LINC00476Q8WZB0 136 aa11.43□□□□□ -0.58
PDZD8-201ENST00000334464 EPM2AB3EWF7 344 aa11.42□□□□□ -0.58
PDZD8-201ENST00000334464 NBDYA0A0U1RRE5 68 aa11.42□□□□□ -0.58
PDZD8-201ENST00000334464 RTL8CO15255 209 aa11.4□□□□□ -0.58
PDZD8-201ENST00000334464 DNAH10OSP0CZ25 163 aa11.39□□□□□ -0.59
PDZD8-201ENST00000334464 LINC00315P59091 139 aa11.39□□□□□ -0.59
PDZD8-201ENST00000334464 A8MWP4 228 aa11.38□□□□□ -0.59
PDZD8-201ENST00000334464 IGLV6-57P01721 117 aa11.35□□□□□ -0.59
PDZD8-201ENST00000334464 Q9UF83 564 aa11.34□□□□□ -0.59
PDZD8-201ENST00000334464 CYP4F30PQ9H0H9 118 aa11.33□□□□□ -0.6
PDZD8-201ENST00000334464 NOTCH1P46531 2555 aa11.33□□□□□ -0.6
PDZD8-201ENST00000334464 PRO0461Q9UI25 63 aa11.32□□□□□ -0.6
PDZD8-201ENST00000334464 Q8NAQ8 132 aa11.32□□□□□ -0.6
PDZD8-201ENST00000334464 FAM218AQ96MZ4 157 aa11.31□□□□□ -0.6
PDZD8-201ENST00000334464 EP400Q96L91 3159 aa11.29□□□□□ -0.6
PDZD8-201ENST00000334464 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
PDZD8-201ENST00000334464 RPL37AP61513 92 aaKnown RBP11.28□□□□□ -0.6
PDZD8-201ENST00000334464 ST20-AS1Q8NBB2 130 aa11.28□□□□□ -0.6
PDZD8-201ENST00000334464 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
PDZD8-201ENST00000334464 CHD6Q8TD26 2715 aa11.27□□□□□ -0.6
PDZD8-201ENST00000334464 Q96NJ1 140 aa11.27□□□□□ -0.61
PDZD8-201ENST00000334464 PHF5AQ7RTV0 110 aaKnown RBP11.27□□□□□ -0.61
PDZD8-201ENST00000334464 LINC00588Q9Y4M8 146 aa11.27□□□□□ -0.61
PDZD8-201ENST00000334464 UNC79Q9P2D8 2635 aa11.26□□□□□ -0.61
PDZD8-201ENST00000334464 KLK9Q2XQG4 91 aa11.26□□□□□ -0.61
PDZD8-201ENST00000334464 UQCR11O14957 56 aa11.26□□□□□ -0.61
PDZD8-201ENST00000334464 WWC2-AS2Q96NR7 200 aa11.25□□□□□ -0.61
PDZD8-201ENST00000334464 DMBT1Q9UGM3 2413 aaPredicted RBP11.25□□□□□ -0.61
PDZD8-201ENST00000334464 CD164Q04900 197 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms