RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 TMEM126AQ9H061 195 aa3.69□□□□□ -1.82
USP16-201ENST00000334352 A0A087X002 238 aa3.69□□□□□ -1.82
USP16-201ENST00000334352 SSBP3-AS1Q7Z2R9 100 aa3.69□□□□□ -1.82
USP16-201ENST00000334352 FABP9Q0Z7S8 132 aa3.68□□□□□ -1.82
USP16-201ENST00000334352 ZC2HC1BQ5TFG8 222 aa3.68□□□□□ -1.82
USP16-201ENST00000334352 SMCO4Q9NRQ5 59 aa3.68□□□□□ -1.82
USP16-201ENST00000334352 ASB16-AS1Q495Z4 193 aa3.68□□□□□ -1.82
USP16-201ENST00000334352 SNAPINO95295 136 aa3.68□□□□□ -1.82
USP16-201ENST00000334352 SPRR1BP22528 89 aa3.68□□□□□ -1.82
USP16-201ENST00000334352 SPINK1P00995 79 aa3.67□□□□□ -1.82
USP16-201ENST00000334352 FAM19A2Q8N3H0 131 aa3.67□□□□□ -1.82
USP16-201ENST00000334352 PLEKHB2Q96CS7 222 aa3.67□□□□□ -1.82
USP16-201ENST00000334352 SPINK8P0C7L1 97 aa3.67□□□□□ -1.82
USP16-201ENST00000334352 UBE2AP49459 152 aa3.67□□□□□ -1.82
USP16-201ENST00000334352 COMMD7Q86VX2 200 aa3.67□□□□□ -1.82
USP16-201ENST00000334352 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
USP16-201ENST00000334352 LEPROTO15243 131 aa3.66□□□□□ -1.82
USP16-201ENST00000334352 TIMM17BO60830 172 aa3.66□□□□□ -1.82
USP16-201ENST00000334352 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
USP16-201ENST00000334352 Q5XG85 94 aa3.66□□□□□ -1.82
USP16-201ENST00000334352 SVBPQ8N300 66 aa3.66□□□□□ -1.82
USP16-201ENST00000334352 MAP1LC3CQ9BXW4 147 aa3.66□□□□□ -1.82
USP16-201ENST00000334352 TOMM7Q9P0U1 55 aa3.66□□□□□ -1.82
USP16-201ENST00000334352 CHTOPQ9Y3Y2 248 aaKnown RBP3.66□□□□□ -1.82
USP16-201ENST00000334352 TRAPPC1Q9Y5R8 145 aa3.66□□□□□ -1.82
USP16-201ENST00000334352 XAGE1AQ9HD64 81 aa3.66□□□□□ -1.82
USP16-201ENST00000334352 TRBV7-6A0A0J9YX20 115 aa3.65□□□□□ -1.82
USP16-201ENST00000334352 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
USP16-201ENST00000334352 A0A0J9YXY3 114 aa3.65□□□□□ -1.83
USP16-201ENST00000334352 MYMXA0A1B0GTQ4 84 aa3.65□□□□□ -1.83
USP16-201ENST00000334352 B5MCH6 92 aa3.65□□□□□ -1.83
USP16-201ENST00000334352 PLNP26678 52 aa3.65□□□□□ -1.83
USP16-201ENST00000334352 CD164Q04900 197 aa3.65□□□□□ -1.83
USP16-201ENST00000334352 KIAA1644Q3SXP7 199 aa3.65□□□□□ -1.83
USP16-201ENST00000334352 IGLV6-57P01721 117 aa3.64□□□□□ -1.83
USP16-201ENST00000334352 IFI27L1Q96BM0 104 aa3.64□□□□□ -1.83
USP16-201ENST00000334352 Q8NDZ9 215 aa3.64□□□□□ -1.83
USP16-201ENST00000334352 SPANXB1Q9NS25 103 aaPredicted RBP3.64□□□□□ -1.83
USP16-201ENST00000334352 LRP2P98164 4655 aa3.63□□□□□ -1.83
USP16-201ENST00000334352 NDUFA5Q16718 116 aa3.63□□□□□ -1.83
USP16-201ENST00000334352 S100A12P80511 92 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 PRR4Q16378 134 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 FAM19A1Q7Z5A9 133 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 CBLN2Q8IUK8 224 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 AKR1D1P51857 326 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 Q8N377 158 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 IGLV7-46A0A075B6I9 117 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 RPL37AP8A6NKH3 93 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 SLC25A20O43772 301 aa3.62□□□□□ -1.83
USP16-201ENST00000334352 HSPB8Q9UJY1 196 aa3.61□□□□□ -1.83
USP16-201ENST00000334352 TMEM238C9JI98 176 aa3.61□□□□□ -1.83
USP16-201ENST00000334352 JOSD1Q15040 202 aaPredicted RBP3.61□□□□□ -1.83
USP16-201ENST00000334352 Q6ZRX8 168 aa3.61□□□□□ -1.83
USP16-201ENST00000334352 NDUFA12Q9UI09 145 aa3.61□□□□□ -1.83
USP16-201ENST00000334352 LPAP08519 4548 aa3.61□□□□□ -1.83
USP16-201ENST00000334352 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
USP16-201ENST00000334352 SLC25A34Q6PIV7 304 aa3.6□□□□□ -1.83
USP16-201ENST00000334352 HERVK_113P61574 105 aa3.6□□□□□ -1.83
USP16-201ENST00000334352 E9PLD3 99 aa3.59□□□□□ -1.83
USP16-201ENST00000334352 MEIG1Q5JSS6 88 aa3.59□□□□□ -1.83
USP16-201ENST00000334352 TMEM170BQ5T4T1 132 aa3.59□□□□□ -1.83
USP16-201ENST00000334352 C3orf22Q8N5N4 141 aa3.59□□□□□ -1.83
USP16-201ENST00000334352 LINC00158P58513 81 aa3.59□□□□□ -1.84
USP16-201ENST00000334352 LINC00310P59036 64 aa3.59□□□□□ -1.84
USP16-201ENST00000334352 DPM2O94777 84 aa3.58□□□□□ -1.84
USP16-201ENST00000334352 SMIM13P0DJ93 91 aa3.58□□□□□ -1.84
USP16-201ENST00000334352 PFN2P35080 140 aa3.58□□□□□ -1.84
USP16-201ENST00000334352 Q6ZVH6 145 aa3.58□□□□□ -1.84
USP16-201ENST00000334352 Q8NBF4 154 aa3.58□□□□□ -1.84
USP16-201ENST00000334352 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
USP16-201ENST00000334352 DHRS4-AS1Q9P1J3 65 aa3.58□□□□□ -1.84
USP16-201ENST00000334352 COA6Q5JTJ3 125 aaKnown RBP3.58□□□□□ -1.84
USP16-201ENST00000334352 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
USP16-201ENST00000334352 IGKV2-28A0A075B6P5 120 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 ETDCA0A1B0GVM5 59 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 IGKV2D-28P01615 120 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 PRLHP81277 87 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 COPS9Q8WXC6 57 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 J3QQQ9 107 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 DDTP30046 118 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 C4orf48Q5BLP8 95 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 SOSTDC1Q6X4U4 206 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 LITAFQ99732 161 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 Q9BRP9 147 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 SPANXDQ9BXN6 97 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 SPANXCQ9NY87 97 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 TRBV10-3A0A0K0K1G6 114 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 LIMD2Q9BT23 127 aa3.57□□□□□ -1.84
USP16-201ENST00000334352 SCO1O75880 301 aa3.56□□□□□ -1.84
USP16-201ENST00000334352 IGKCP01834 107 aa3.56□□□□□ -1.84
USP16-201ENST00000334352 GAGE10A6NGK3 116 aa3.56□□□□□ -1.84
USP16-201ENST00000334352 LEPROTL1O95214 131 aa3.56□□□□□ -1.84
USP16-201ENST00000334352 TSPEAR-AS2P59090 65 aa3.56□□□□□ -1.84
USP16-201ENST00000334352 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
USP16-201ENST00000334352 PET117Q6UWS5 81 aa3.56□□□□□ -1.84
USP16-201ENST00000334352 A4D1N5 150 aa3.55□□□□□ -1.84
USP16-201ENST00000334352 COLCA2A8K830 154 aa3.55□□□□□ -1.84
USP16-201ENST00000334352 HSBP1O75506 76 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms