RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 MEIG1Q5JSS6 88 aa13□□□□□ -0.33
YBX1-202ENST00000332220 KRTAP11-1Q8IUC1 163 aa13□□□□□ -0.33
YBX1-202ENST00000332220 IGKV2D-26A0A0A0MRZ7 120 aa12.99□□□□□ -0.33
YBX1-202ENST00000332220 NMUP48645 174 aa12.99□□□□□ -0.33
YBX1-202ENST00000332220 PRR3P79522 188 aaKnown RBP12.99□□□□□ -0.33
YBX1-202ENST00000332220 PLA2G2DQ9UNK4 145 aa12.99□□□□□ -0.33
YBX1-202ENST00000332220 C22orf24Q9Y442 160 aa12.98□□□□□ -0.33
YBX1-202ENST00000332220 PSORS1C2Q9UIG4 136 aa12.96□□□□□ -0.33
YBX1-202ENST00000332220 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
YBX1-202ENST00000332220 MIR7-3HGQ8N6C7 128 aa12.95□□□□□ -0.34
YBX1-202ENST00000332220 Q8NDZ9 215 aa12.95□□□□□ -0.34
YBX1-202ENST00000332220 IGLV5-37A0A075B6J1 123 aa12.94□□□□□ -0.34
YBX1-202ENST00000332220 TTTY13Q9BZ97 58 aa12.94□□□□□ -0.34
YBX1-202ENST00000332220 TP73-AS1Q9UF72 201 aa12.94□□□□□ -0.34
YBX1-202ENST00000332220 A0A0J9YXY3 114 aa12.93□□□□□ -0.34
YBX1-202ENST00000332220 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
YBX1-202ENST00000332220 VPREB1P12018 145 aa12.93□□□□□ -0.34
YBX1-202ENST00000332220 UBE2BP63146 152 aa12.93□□□□□ -0.34
YBX1-202ENST00000332220 AKR1D1P51857 326 aa12.92□□□□□ -0.34
YBX1-202ENST00000332220 MRPL55Q7Z7F7 128 aaKnown RBP12.92□□□□□ -0.34
YBX1-202ENST00000332220 DAND5Q8N907 189 aa12.92□□□□□ -0.34
YBX1-202ENST00000332220 MYCBP2O75592 4640 aa12.9□□□□□ -0.34
YBX1-202ENST00000332220 LBHQ53QV2 105 aaPredicted RBP12.9□□□□□ -0.34
YBX1-202ENST00000332220 NKAPP1Q8N9T2 125 aa12.9□□□□□ -0.34
YBX1-202ENST00000332220 LINC00167Q96N53 147 aa12.9□□□□□ -0.34
YBX1-202ENST00000332220 GAGE10A6NGK3 116 aa12.89□□□□□ -0.35
YBX1-202ENST00000332220 ZNF815PA8K554 130 aa12.89□□□□□ -0.35
YBX1-202ENST00000332220 TMA7Q9Y2S6 64 aaKnown RBP12.89□□□□□ -0.35
YBX1-202ENST00000332220 C1orf137Q5JT78 98 aa12.88□□□□□ -0.35
YBX1-202ENST00000332220 RPL24P83731 157 aaKnown RBP12.87□□□□□ -0.35
YBX1-202ENST00000332220 ADAMTSL4-AS1Q5T5F5 129 aa12.87□□□□□ -0.35
YBX1-202ENST00000332220 RPL37AP8A6NKH3 93 aa12.86□□□□□ -0.35
YBX1-202ENST00000332220 SCGB1D1O95968 90 aa12.86□□□□□ -0.35
YBX1-202ENST00000332220 BOD1L2Q8IYS8 172 aa12.86□□□□□ -0.35
YBX1-202ENST00000332220 LITAFQ99732 161 aa12.85□□□□□ -0.35
YBX1-202ENST00000332220 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
YBX1-202ENST00000332220 LRP1Q07954 4544 aaKnown RBP12.84□□□□□ -0.35
YBX1-202ENST00000332220 PCP2Q8IVA1 136 aa12.84□□□□□ -0.35
YBX1-202ENST00000332220 LOC107984156A0A0G2JMH3 177 aa12.83□□□□□ -0.36
YBX1-202ENST00000332220 SRSF9Q13242 221 aaKnown RBP eCLIP12.83□□□□□ -0.36
YBX1-202ENST00000332220 ARL17AQ8IVW1 177 aa12.83□□□□□ -0.36
YBX1-202ENST00000332220 EIF4EBP3O60516 100 aaPredicted RBP12.82□□□□□ -0.36
YBX1-202ENST00000332220 TIMM17BO60830 172 aa12.82□□□□□ -0.36
YBX1-202ENST00000332220 IGLV7-43P04211 117 aa12.82□□□□□ -0.36
YBX1-202ENST00000332220 NPC2P61916 151 aa12.82□□□□□ -0.36
YBX1-202ENST00000332220 SOSTDC1Q6X4U4 206 aa12.82□□□□□ -0.36
YBX1-202ENST00000332220 IGKV2-28A0A075B6P5 120 aa12.81□□□□□ -0.36
YBX1-202ENST00000332220 IGKV2D-28P01615 120 aa12.81□□□□□ -0.36
YBX1-202ENST00000332220 NCR3O14931 201 aa12.8□□□□□ -0.36
YBX1-202ENST00000332220 IGLV1-50A0A075B6I6 118 aa12.79□□□□□ -0.36
YBX1-202ENST00000332220 HSBP1L1C9JCN9 74 aa12.79□□□□□ -0.36
YBX1-202ENST00000332220 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
YBX1-202ENST00000332220 M0R378 163 aa12.78□□□□□ -0.36
YBX1-202ENST00000332220 MIEN1Q9BRT3 115 aa12.78□□□□□ -0.36
YBX1-202ENST00000332220 SCGB1D4Q6XE38 83 aa12.77□□□□□ -0.37
YBX1-202ENST00000332220 LINC00308Q8TCZ7 52 aa12.76□□□□□ -0.37
YBX1-202ENST00000332220 BCE1O60756 84 aa12.75□□□□□ -0.37
YBX1-202ENST00000332220 DMBT1Q9UGM3 2413 aaPredicted RBP12.75□□□□□ -0.37
YBX1-202ENST00000332220 TMEM238C9JI98 176 aa12.74□□□□□ -0.37
YBX1-202ENST00000332220 JOSD1Q15040 202 aaPredicted RBP12.74□□□□□ -0.37
YBX1-202ENST00000332220 KRTAP29-1A8MX34 341 aaPredicted RBP12.73□□□□□ -0.37
YBX1-202ENST00000332220 NDUFC2O95298 119 aa12.73□□□□□ -0.37
YBX1-202ENST00000332220 SPANXDQ9BXN6 97 aa12.73□□□□□ -0.37
YBX1-202ENST00000332220 SPANXCQ9NY87 97 aa12.73□□□□□ -0.37
YBX1-202ENST00000332220 TMEM126AQ9H061 195 aa12.72□□□□□ -0.37
YBX1-202ENST00000332220 REG3GQ6UW15 175 aa12.71□□□□□ -0.37
YBX1-202ENST00000332220 SPANXB1Q9NS25 103 aaPredicted RBP12.71□□□□□ -0.37
YBX1-202ENST00000332220 TRBV10-3A0A0K0K1G6 114 aa12.7□□□□□ -0.38
YBX1-202ENST00000332220 TRBV10-2A0A0K0K1G8 114 aa12.7□□□□□ -0.38
YBX1-202ENST00000332220 ZNF861PO60384 105 aa12.7□□□□□ -0.38
YBX1-202ENST00000332220 OXTP01178 125 aa12.7□□□□□ -0.38
YBX1-202ENST00000332220 DIRC1Q969H9 104 aa12.69□□□□□ -0.38
YBX1-202ENST00000332220 H0Y9J4 135 aa12.68□□□□□ -0.38
YBX1-202ENST00000332220 KRTAP13-1Q8IUC0 172 aa12.68□□□□□ -0.38
YBX1-202ENST00000332220 PAM16Q9Y3D7 125 aa12.68□□□□□ -0.38
YBX1-202ENST00000332220 PYY3Q5JQD4 70 aa12.67□□□□□ -0.38
YBX1-202ENST00000332220 PRYO14603 147 aa12.66□□□□□ -0.38
YBX1-202ENST00000332220 COX8AP10176 69 aa12.66□□□□□ -0.38
YBX1-202ENST00000332220 DDTP30046 118 aa12.66□□□□□ -0.38
YBX1-202ENST00000332220 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
YBX1-202ENST00000332220 SPATA45Q537H7 98 aa12.66□□□□□ -0.38
YBX1-202ENST00000332220 VAMP8Q9BV40 100 aa12.66□□□□□ -0.38
YBX1-202ENST00000332220 KCNQ1DNQ9H478 68 aa12.66□□□□□ -0.38
YBX1-202ENST00000332220 UBE2AP49459 152 aa12.65□□□□□ -0.38
YBX1-202ENST00000332220 PRLHP81277 87 aa12.65□□□□□ -0.38
YBX1-202ENST00000332220 FAM19A1Q7Z5A9 133 aa12.65□□□□□ -0.38
YBX1-202ENST00000332220 J3QL48 77 aa12.64□□□□□ -0.39
YBX1-202ENST00000332220 Q6ZVH6 145 aa12.64□□□□□ -0.39
YBX1-202ENST00000332220 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
YBX1-202ENST00000332220 IFITM1P13164 125 aa12.63□□□□□ -0.39
YBX1-202ENST00000332220 SPRR1AP35321 89 aa12.63□□□□□ -0.39
YBX1-202ENST00000332220 MUSTN1Q8IVN3 82 aa12.63□□□□□ -0.39
YBX1-202ENST00000332220 TNXBP22105 4242 aa12.63□□□□□ -0.39
YBX1-202ENST00000332220 MT1HL1P0DM35 61 aa12.62□□□□□ -0.39
YBX1-202ENST00000332220 S100A7L2Q5SY68 101 aa12.62□□□□□ -0.39
YBX1-202ENST00000332220 C14orf144Q96I85 54 aa12.62□□□□□ -0.39
YBX1-202ENST00000332220 LINC01600Q96MT4 127 aa12.62□□□□□ -0.39
YBX1-202ENST00000332220 PPDPFQ9H3Y8 114 aa12.61□□□□□ -0.39
YBX1-202ENST00000332220 KRTAP4-16G5E9R7 235 aaPredicted RBP12.6□□□□□ -0.39
YBX1-202ENST00000332220 DLEU1O43261 78 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms