RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 LY6G6DO95868 133 aa11.9□□□□□ -0.51
PTP4A3-201ENST00000329397 HTN3P15516 51 aa11.9□□□□□ -0.51
PTP4A3-201ENST00000329397 KIAA0087Q14695 138 aa11.9□□□□□ -0.51
PTP4A3-201ENST00000329397 C6orf223Q8N319 242 aa11.9□□□□□ -0.51
PTP4A3-201ENST00000329397 ORMDL1Q9P0S3 153 aa11.89□□□□□ -0.51
PTP4A3-201ENST00000329397 PKD1L1Q8TDX9 2849 aa11.88□□□□□ -0.51
PTP4A3-201ENST00000329397 REG3AQ06141 175 aa11.88□□□□□ -0.51
PTP4A3-201ENST00000329397 OBSCN-AS1Q96MR7 158 aa11.88□□□□□ -0.51
PTP4A3-201ENST00000329397 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
PTP4A3-201ENST00000329397 TEP1Q99973 2627 aaKnown RBP11.87□□□□□ -0.51
PTP4A3-201ENST00000329397 CELA1Q9UNI1 258 aa11.87□□□□□ -0.51
PTP4A3-201ENST00000329397 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
PTP4A3-201ENST00000329397 C6orf99Q4VX62 202 aa11.85□□□□□ -0.51
PTP4A3-201ENST00000329397 C4orf48Q5BLP8 95 aa11.85□□□□□ -0.51
PTP4A3-201ENST00000329397 CD164L2Q6UWJ8 174 aa11.85□□□□□ -0.51
PTP4A3-201ENST00000329397 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
PTP4A3-201ENST00000329397 Q8N814 137 aa11.84□□□□□ -0.51
PTP4A3-201ENST00000329397 IGHV4-28A0A0C4DH34 117 aa11.84□□□□□ -0.51
PTP4A3-201ENST00000329397 UNQ6190/PRO20217Q6UXQ8 127 aa11.84□□□□□ -0.51
PTP4A3-201ENST00000329397 DAD1P61803 113 aa11.82□□□□□ -0.52
PTP4A3-201ENST00000329397 BRK1Q8WUW1 75 aa11.82□□□□□ -0.52
PTP4A3-201ENST00000329397 HIST1H4AP62805 103 aaKnown RBP11.81□□□□□ -0.52
PTP4A3-201ENST00000329397 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
PTP4A3-201ENST00000329397 S100A7L2Q5SY68 101 aa11.8□□□□□ -0.52
PTP4A3-201ENST00000329397 KLK12Q9UKR0 248 aa11.79□□□□□ -0.52
PTP4A3-201ENST00000329397 CCKP06307 115 aa11.79□□□□□ -0.52
PTP4A3-201ENST00000329397 Q6JHZ5 121 aa11.79□□□□□ -0.52
PTP4A3-201ENST00000329397 SPAG11BQ08648 103 aa11.78□□□□□ -0.52
PTP4A3-201ENST00000329397 LYRM9A8MSI8 78 aa11.78□□□□□ -0.52
PTP4A3-201ENST00000329397 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
PTP4A3-201ENST00000329397 CYSRT1A8MQ03 144 aa11.76□□□□□ -0.53
PTP4A3-201ENST00000329397 ATOX1O00244 68 aa11.76□□□□□ -0.53
PTP4A3-201ENST00000329397 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
PTP4A3-201ENST00000329397 XAGE1AQ9HD64 81 aa11.76□□□□□ -0.53
PTP4A3-201ENST00000329397 NDUFC2O95298 119 aa11.75□□□□□ -0.53
PTP4A3-201ENST00000329397 M0R2N4 97 aa11.75□□□□□ -0.53
PTP4A3-201ENST00000329397 COX17Q14061 63 aa11.74□□□□□ -0.53
PTP4A3-201ENST00000329397 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
PTP4A3-201ENST00000329397 USP17L23D6RBM5 183 aa11.74□□□□□ -0.53
PTP4A3-201ENST00000329397 TMEM256-PLSCR3K7ERE1 68 aa11.74□□□□□ -0.53
PTP4A3-201ENST00000329397 Q8NAQ8 132 aa11.73□□□□□ -0.53
PTP4A3-201ENST00000329397 J3QKU1 62 aa11.73□□□□□ -0.53
PTP4A3-201ENST00000329397 INAFM1C9JVW0 142 aa11.72□□□□□ -0.53
PTP4A3-201ENST00000329397 ENHOQ6UWT2 76 aa11.72□□□□□ -0.53
PTP4A3-201ENST00000329397 TRAV23DV6A0A075B6W5 121 aa11.72□□□□□ -0.53
PTP4A3-201ENST00000329397 C9orf66Q5T8R8 295 aa11.72□□□□□ -0.53
PTP4A3-201ENST00000329397 JMJD7-PLA2G4BH0Y9G9 81 aa11.71□□□□□ -0.53
PTP4A3-201ENST00000329397 LINC00575Q6W349 94 aa11.71□□□□□ -0.53
PTP4A3-201ENST00000329397 LAMTOR3Q9UHA4 124 aa11.7□□□□□ -0.54
PTP4A3-201ENST00000329397 TENM3Q9P273 2699 aa11.7□□□□□ -0.54
PTP4A3-201ENST00000329397 PMAIP1Q13794 54 aa11.69□□□□□ -0.54
PTP4A3-201ENST00000329397 Q6ZQY7 126 aa11.69□□□□□ -0.54
PTP4A3-201ENST00000329397 APOC4P55056 127 aa11.68□□□□□ -0.54
PTP4A3-201ENST00000329397 HIGD2BQ4VC39 106 aa11.68□□□□□ -0.54
PTP4A3-201ENST00000329397 TRBV10-3A0A0K0K1G6 114 aa11.67□□□□□ -0.54
PTP4A3-201ENST00000329397 LELP1Q5T871 98 aa11.67□□□□□ -0.54
PTP4A3-201ENST00000329397 C6orf48Q9UBA6 75 aa11.67□□□□□ -0.54
PTP4A3-201ENST00000329397 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
PTP4A3-201ENST00000329397 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
PTP4A3-201ENST00000329397 SERP2Q8N6R1 65 aa11.66□□□□□ -0.54
PTP4A3-201ENST00000329397 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.54
PTP4A3-201ENST00000329397 RBM3P98179 157 aaKnown RBP11.65□□□□□ -0.54
PTP4A3-201ENST00000329397 EPM2AB3EWF7 344 aa11.64□□□□□ -0.55
PTP4A3-201ENST00000329397 ANK2Q01484 3957 aa11.64□□□□□ -0.55
PTP4A3-201ENST00000329397 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
PTP4A3-201ENST00000329397 IGLV6-57P01721 117 aa11.63□□□□□ -0.55
PTP4A3-201ENST00000329397 Q6ZQT0 140 aa11.63□□□□□ -0.55
PTP4A3-201ENST00000329397 GHRHP01286 108 aa11.63□□□□□ -0.55
PTP4A3-201ENST00000329397 MIFP14174 115 aa11.63□□□□□ -0.55
PTP4A3-201ENST00000329397 UBL5Q9BZL1 73 aa11.63□□□□□ -0.55
PTP4A3-201ENST00000329397 PRR34Q9NV39 138 aa11.63□□□□□ -0.55
PTP4A3-201ENST00000329397 A0A0J9YWU9 116 aa11.62□□□□□ -0.55
PTP4A3-201ENST00000329397 CD164Q04900 197 aa11.62□□□□□ -0.55
PTP4A3-201ENST00000329397 LYPD5Q6UWN5 251 aa11.62□□□□□ -0.55
PTP4A3-201ENST00000329397 HAMPP81172 84 aa11.6□□□□□ -0.55
PTP4A3-201ENST00000329397 SERP1Q9Y6X1 66 aa11.6□□□□□ -0.55
PTP4A3-201ENST00000329397 FLNBO75369 2602 aaKnown RBP11.58□□□□□ -0.56
PTP4A3-201ENST00000329397 STAB1Q9NY15 2570 aa11.58□□□□□ -0.56
PTP4A3-201ENST00000329397 SCXQ7RTU7 201 aa11.58□□□□□ -0.56
PTP4A3-201ENST00000329397 DIRC1Q969H9 104 aa11.57□□□□□ -0.56
PTP4A3-201ENST00000329397 CAMK2N2Q96S95 79 aa11.57□□□□□ -0.56
PTP4A3-201ENST00000329397 SMIM26A0A096LP01 95 aa11.56□□□□□ -0.56
PTP4A3-201ENST00000329397 NOTCH1P46531 2555 aa11.56□□□□□ -0.56
PTP4A3-201ENST00000329397 ZNF73O43830 326 aaPredicted RBP11.56□□□□□ -0.56
PTP4A3-201ENST00000329397 LINC00474Q9P2X8 69 aa11.56□□□□□ -0.56
PTP4A3-201ENST00000329397 Q6ZVQ6 151 aa11.55□□□□□ -0.56
PTP4A3-201ENST00000329397 Q6ZRU5 148 aa11.55□□□□□ -0.56
PTP4A3-201ENST00000329397 LINC01547P58512 204 aaPredicted RBP11.54□□□□□ -0.56
PTP4A3-201ENST00000329397 OXLD1Q5BKU9 147 aa11.54□□□□□ -0.56
PTP4A3-201ENST00000329397 KPRPQ5T749 579 aaPredicted RBP11.54□□□□□ -0.56
PTP4A3-201ENST00000329397 ATP5EP2Q5VTU8 51 aa11.54□□□□□ -0.56
PTP4A3-201ENST00000329397 C20orf197Q8N268 126 aa11.54□□□□□ -0.56
PTP4A3-201ENST00000329397 MAST4O15021 2626 aa11.53□□□□□ -0.56
PTP4A3-201ENST00000329397 Q6ZTC4 211 aa11.53□□□□□ -0.56
PTP4A3-201ENST00000329397 NDUFC2-KCTD14E9PQ53 114 aa11.53□□□□□ -0.56
PTP4A3-201ENST00000329397 LOC110117498A0A087WWA1 95 aa11.52□□□□□ -0.56
PTP4A3-201ENST00000329397 C11orf45Q8TAV5 145 aa11.52□□□□□ -0.56
PTP4A3-201ENST00000329397 COX7BP24311 80 aa11.52□□□□□ -0.57
PTP4A3-201ENST00000329397 MUC7Q8TAX7 377 aa11.52□□□□□ -0.57
PTP4A3-201ENST00000329397 GVQW2A0A096LPI5 108 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms