RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 Q8NBF4 154 aa11.3□□□□□ -0.6
SMAD3-201ENST00000327367 PHF5AQ7RTV0 110 aaKnown RBP11.3□□□□□ -0.6
SMAD3-201ENST00000327367 KRTAP10-9P60411 292 aa11.28□□□□□ -0.6
SMAD3-201ENST00000327367 H3BPC8 53 aa11.27□□□□□ -0.61
SMAD3-201ENST00000327367 LINC00313P59037 77 aa11.27□□□□□ -0.61
SMAD3-201ENST00000327367 ANKHD1Q8IWZ3 2542 aaKnown RBP11.26□□□□□ -0.61
SMAD3-201ENST00000327367 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
SMAD3-201ENST00000327367 Q6ZRX8 168 aa11.24□□□□□ -0.61
SMAD3-201ENST00000327367 LITAFQ99732 161 aa11.24□□□□□ -0.61
SMAD3-201ENST00000327367 APLNQ9ULZ1 77 aa11.24□□□□□ -0.61
SMAD3-201ENST00000327367 KTN1-AS1Q86SY8 53 aa11.24□□□□□ -0.61
SMAD3-201ENST00000327367 C1orf134Q5TEV5 83 aa11.23□□□□□ -0.61
SMAD3-201ENST00000327367 CYP4F30PQ9H0H9 118 aa11.22□□□□□ -0.61
SMAD3-201ENST00000327367 SONP18583 2426 aaKnown RBP11.22□□□□□ -0.61
SMAD3-201ENST00000327367 MIR22HGQ0VDD5 57 aa11.22□□□□□ -0.61
SMAD3-201ENST00000327367 EPM2AB3EWF7 344 aa11.21□□□□□ -0.61
SMAD3-201ENST00000327367 HIVEP3Q5T1R4 2406 aa11.21□□□□□ -0.61
SMAD3-201ENST00000327367 A0A1W2PPR1 153 aa11.21□□□□□ -0.61
SMAD3-201ENST00000327367 LOC101927531A0A1B0GV80 90 aa11.21□□□□□ -0.62
SMAD3-201ENST00000327367 UQCR11O14957 56 aa11.19□□□□□ -0.62
SMAD3-201ENST00000327367 ADAMTS20P59510 1910 aa11.19□□□□□ -0.62
SMAD3-201ENST00000327367 Q96NJ1 140 aa11.19□□□□□ -0.62
SMAD3-201ENST00000327367 PTPRBP23467 1997 aa11.19□□□□□ -0.62
SMAD3-201ENST00000327367 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
SMAD3-201ENST00000327367 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-201ENST00000327367 LTBP2Q14767 1821 aa11.17□□□□□ -0.62
SMAD3-201ENST00000327367 LCA10Q71F78 164 aa11.17□□□□□ -0.62
SMAD3-201ENST00000327367 H7BZZ5 65 aa11.16□□□□□ -0.62
SMAD3-201ENST00000327367 A0A0G2JQZ4 141 aa11.15□□□□□ -0.62
SMAD3-201ENST00000327367 A0A1W2PNN7 141 aa11.15□□□□□ -0.62
SMAD3-201ENST00000327367 MUC22E2RYF6 1773 aaPredicted RBP11.15□□□□□ -0.63
SMAD3-201ENST00000327367 A8MWP4 228 aa11.14□□□□□ -0.63
SMAD3-201ENST00000327367 CRIPTQ9P021 101 aa11.13□□□□□ -0.63
SMAD3-201ENST00000327367 ERC2-IT1O76042 136 aa11.13□□□□□ -0.63
SMAD3-201ENST00000327367 A0A1B0GW54 56 aa11.12□□□□□ -0.63
SMAD3-201ENST00000327367 Q6ZRP5 223 aa11.11□□□□□ -0.63
SMAD3-201ENST00000327367 CUL9Q8IWT3 2517 aa11.11□□□□□ -0.63
SMAD3-201ENST00000327367 KLKP1Q107X0 134 aa11.1□□□□□ -0.63
SMAD3-201ENST00000327367 C16orf95Q9H693 158 aa11.1□□□□□ -0.63
SMAD3-201ENST00000327367 MRPL34Q9BQ48 92 aaKnown RBP11.1□□□□□ -0.63
SMAD3-201ENST00000327367 COL4A4P53420 1690 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-201ENST00000327367 DSCR10P59022 87 aa11.07□□□□□ -0.64
SMAD3-201ENST00000327367 C9orf129Q5T035 196 aaKnown RBP11.07□□□□□ -0.64
SMAD3-201ENST00000327367 IGLV6-57P01721 117 aa11.07□□□□□ -0.64
SMAD3-201ENST00000327367 TYMSOSQ8TAI1 123 aa11.03□□□□□ -0.64
SMAD3-201ENST00000327367 IGFL1Q6UW32 110 aa11.02□□□□□ -0.65
SMAD3-201ENST00000327367 A0A0D9SG42 100 aa11.01□□□□□ -0.65
SMAD3-201ENST00000327367 BDP1A6H8Y1 2624 aa11.01□□□□□ -0.65
SMAD3-201ENST00000327367 MUC6Q6W4X9 2439 aa11.01□□□□□ -0.65
SMAD3-201ENST00000327367 NOTCH2Q04721 2471 aa11□□□□□ -0.65
SMAD3-201ENST00000327367 PRR15Q8IV56 129 aa11□□□□□ -0.65
SMAD3-201ENST00000327367 C16orf90A8MZG2 172 aa10.99□□□□□ -0.65
SMAD3-201ENST00000327367 DOPEY1Q5JWR5 2465 aa10.98□□□□□ -0.65
SMAD3-201ENST00000327367 RTL8CO15255 209 aa10.98□□□□□ -0.65
SMAD3-201ENST00000327367 ACACBO00763 2458 aa10.98□□□□□ -0.65
SMAD3-201ENST00000327367 FAM229AH3BQW9 127 aa10.97□□□□□ -0.65
SMAD3-201ENST00000327367 C8orf17Q9NRJ1 99 aa10.97□□□□□ -0.65
SMAD3-201ENST00000327367 H3BS24 57 aa10.96□□□□□ -0.65
SMAD3-201ENST00000327367 ABCA2Q9BZC7 2435 aa10.96□□□□□ -0.65
SMAD3-201ENST00000327367 IGLV1-50A0A075B6I6 118 aa10.93□□□□□ -0.66
SMAD3-201ENST00000327367 CDC42SE1Q9NRR8 79 aa10.93□□□□□ -0.66
SMAD3-201ENST00000327367 RBM12B-AS1Q9P1G2 102 aa10.93□□□□□ -0.66
SMAD3-201ENST00000327367 GVQW2A0A096LPI5 108 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-201ENST00000327367 C9orf92A6NGG3 77 aa10.93□□□□□ -0.66
SMAD3-201ENST00000327367 Q8N377 158 aa10.92□□□□□ -0.66
SMAD3-201ENST00000327367 LINC00588Q9Y4M8 146 aa10.92□□□□□ -0.66
SMAD3-201ENST00000327367 LINC00528Q8N1L1 170 aa10.91□□□□□ -0.66
SMAD3-201ENST00000327367 OBSCN-AS1Q96MR7 158 aa10.91□□□□□ -0.66
SMAD3-201ENST00000327367 COL27A1Q8IZC6 1860 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-201ENST00000327367 CACNA1AO00555 2505 aa10.9□□□□□ -0.67
SMAD3-201ENST00000327367 LINC01554Q52M75 96 aa10.88□□□□□ -0.67
SMAD3-201ENST00000327367 WIPF1O43516 503 aa10.88□□□□□ -0.67
SMAD3-201ENST00000327367 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
SMAD3-201ENST00000327367 A0A1B0GVX0 72 aa10.87□□□□□ -0.67
SMAD3-201ENST00000327367 KCNQ1DNQ9H478 68 aa10.86□□□□□ -0.67
SMAD3-201ENST00000327367 Q8N1X5 172 aa10.86□□□□□ -0.67
SMAD3-201ENST00000327367 PIEZO2Q9H5I5 2752 aa10.84□□□□□ -0.67
SMAD3-201ENST00000327367 PRAC1Q96KF2 57 aa10.84□□□□□ -0.67
SMAD3-201ENST00000327367 FAM229BQ4G0N7 80 aa10.83□□□□□ -0.68
SMAD3-201ENST00000327367 Q8NAQ8 132 aa10.83□□□□□ -0.68
SMAD3-201ENST00000327367 MYO18BQ8IUG5 2567 aa10.82□□□□□ -0.68
SMAD3-201ENST00000327367 NAV2Q8IVL1 2488 aa10.82□□□□□ -0.68
SMAD3-201ENST00000327367 CCDC168Q8NDH2 2452 aa10.81□□□□□ -0.68
SMAD3-201ENST00000327367 FN1P02751 2386 aaKnown RBP10.81□□□□□ -0.68
SMAD3-201ENST00000327367 NBDYA0A0U1RRE5 68 aa10.8□□□□□ -0.68
SMAD3-201ENST00000327367 H3BNG1 76 aa10.8□□□□□ -0.68
SMAD3-201ENST00000327367 FAM104AQ969W3 186 aa10.79□□□□□ -0.68
SMAD3-201ENST00000327367 C10orf142B7Z368 130 aa10.79□□□□□ -0.68
SMAD3-201ENST00000327367 PRR26Q8N8Z3 221 aa10.79□□□□□ -0.68
SMAD3-201ENST00000327367 PRO3102Q9H379 93 aa10.78□□□□□ -0.68
SMAD3-201ENST00000327367 DNAH10OSP0CZ25 163 aa10.78□□□□□ -0.68
SMAD3-201ENST00000327367 Q1T7F1 81 aa10.78□□□□□ -0.68
SMAD3-201ENST00000327367 C15orf56Q8N910 161 aa10.78□□□□□ -0.68
SMAD3-201ENST00000327367 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
SMAD3-201ENST00000327367 Q5XG85 94 aa10.77□□□□□ -0.69
SMAD3-201ENST00000327367 IGLV5-48A0A075B6I7 105 aa10.76□□□□□ -0.69
SMAD3-201ENST00000327367 A0A1W2PNM2 257 aa10.75□□□□□ -0.69
SMAD3-201ENST00000327367 LUZP6Q538Z0 58 aa10.74□□□□□ -0.69
SMAD3-201ENST00000327367 ZNF462Q96JM2 2506 aa10.73□□□□□ -0.69
SMAD3-201ENST00000327367 SPANXA2-OT1Q8N9U9 137 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms