RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 Q8NDZ9 215 aa9.96□□□□□ -0.82
SSBP3-201ENST00000326956 C10orf25Q5T742 122 aa9.95□□□□□ -0.82
SSBP3-201ENST00000326956 MUC7Q8TAX7 377 aa9.95□□□□□ -0.82
SSBP3-201ENST00000326956 NDUFC2-KCTD14E9PQ53 114 aa9.94□□□□□ -0.82
SSBP3-201ENST00000326956 LOC110117498A0A087WWA1 95 aa9.94□□□□□ -0.82
SSBP3-201ENST00000326956 CYSRT1A8MQ03 144 aa9.94□□□□□ -0.82
SSBP3-201ENST00000326956 HTN3P15516 51 aa9.94□□□□□ -0.82
SSBP3-201ENST00000326956 DEFB135Q30KP9 77 aa9.94□□□□□ -0.82
SSBP3-201ENST00000326956 PDE6GP18545 87 aa9.93□□□□□ -0.82
SSBP3-201ENST00000326956 AKAP9Q99996 3911 aa9.93□□□□□ -0.82
SSBP3-201ENST00000326956 LINC00482Q8N8I6 264 aa9.93□□□□□ -0.82
SSBP3-201ENST00000326956 NBEAL2Q6ZNJ1 2754 aa9.93□□□□□ -0.82
SSBP3-201ENST00000326956 H3BQ85 93 aa9.93□□□□□ -0.82
SSBP3-201ENST00000326956 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
SSBP3-201ENST00000326956 APCP25054 2843 aa9.92□□□□□ -0.82
SSBP3-201ENST00000326956 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-201ENST00000326956 SEC61GP60059 68 aa9.92□□□□□ -0.82
SSBP3-201ENST00000326956 Q6ZVQ6 151 aa9.92□□□□□ -0.82
SSBP3-201ENST00000326956 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
SSBP3-201ENST00000326956 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
SSBP3-201ENST00000326956 TRAV7A0A075B6U4 112 aa9.91□□□□□ -0.82
SSBP3-201ENST00000326956 IGLV6-57P01721 117 aa9.9□□□□□ -0.82
SSBP3-201ENST00000326956 ZNF469Q96JG9 3925 aaPredicted RBP9.9□□□□□ -0.82
SSBP3-201ENST00000326956 A0A0J9YWU9 116 aa9.9□□□□□ -0.82
SSBP3-201ENST00000326956 IGHV4-30-4P0DP06 118 aa9.9□□□□□ -0.82
SSBP3-201ENST00000326956 FAM236DA0A1B0GTK5 79 aa9.89□□□□□ -0.83
SSBP3-201ENST00000326956 M0R2N4 97 aa9.89□□□□□ -0.83
SSBP3-201ENST00000326956 FAM236CP0DP71 79 aa9.89□□□□□ -0.83
SSBP3-201ENST00000326956 XAGE1AQ9HD64 81 aa9.89□□□□□ -0.83
SSBP3-201ENST00000326956 BCE1O60756 84 aa9.89□□□□□ -0.83
SSBP3-201ENST00000326956 HIVEP2P31629 2446 aa9.88□□□□□ -0.83
SSBP3-201ENST00000326956 OXTP01178 125 aa9.88□□□□□ -0.83
SSBP3-201ENST00000326956 APOC4P55056 127 aa9.88□□□□□ -0.83
SSBP3-201ENST00000326956 LELP1Q5T871 98 aa9.88□□□□□ -0.83
SSBP3-201ENST00000326956 COX7BP24311 80 aa9.87□□□□□ -0.83
SSBP3-201ENST00000326956 CXCL6P80162 114 aa9.86□□□□□ -0.83
SSBP3-201ENST00000326956 KRTAP1-1Q07627 177 aa9.86□□□□□ -0.83
SSBP3-201ENST00000326956 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-201ENST00000326956 NBPF19A0A087WUL8 3843 aa9.85□□□□□ -0.83
SSBP3-201ENST00000326956 ZNF73O43830 326 aaPredicted RBP9.85□□□□□ -0.83
SSBP3-201ENST00000326956 C9orf66Q5T8R8 295 aa9.85□□□□□ -0.83
SSBP3-201ENST00000326956 SPATA3Q8NHX4 192 aa9.85□□□□□ -0.83
SSBP3-201ENST00000326956 TRAV10A0A0B4J240 114 aa9.84□□□□□ -0.83
SSBP3-201ENST00000326956 SPART-AS1P0CW21 52 aa9.84□□□□□ -0.83
SSBP3-201ENST00000326956 C4orf26Q17RF5 130 aa9.84□□□□□ -0.83
SSBP3-201ENST00000326956 SCXQ7RTU7 201 aa9.84□□□□□ -0.83
SSBP3-201ENST00000326956 CELA1Q9UNI1 258 aa9.84□□□□□ -0.83
SSBP3-201ENST00000326956 C6orf48Q9UBA6 75 aa9.83□□□□□ -0.84
SSBP3-201ENST00000326956 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
SSBP3-201ENST00000326956 GVQW2A0A096LPI5 108 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-201ENST00000326956 KRTAP10-3P60369 221 aa9.82□□□□□ -0.84
SSBP3-201ENST00000326956 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
SSBP3-201ENST00000326956 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
SSBP3-201ENST00000326956 PRR34Q9NV39 138 aa9.82□□□□□ -0.84
SSBP3-201ENST00000326956 H7BZZ5 65 aa9.81□□□□□ -0.84
SSBP3-201ENST00000326956 MIFP14174 115 aa9.81□□□□□ -0.84
SSBP3-201ENST00000326956 SERP1Q9Y6X1 66 aa9.8□□□□□ -0.84
SSBP3-201ENST00000326956 HIGD2BQ4VC39 106 aa9.8□□□□□ -0.84
SSBP3-201ENST00000326956 TRBV7-4A0A0J9YYF1 115 aa9.79□□□□□ -0.84
SSBP3-201ENST00000326956 KLKP1Q107X0 134 aa9.79□□□□□ -0.84
SSBP3-201ENST00000326956 ELOF1P60002 83 aaKnown RBP9.79□□□□□ -0.84
SSBP3-201ENST00000326956 RMI2Q96E14 147 aa9.79□□□□□ -0.84
SSBP3-201ENST00000326956 Q5XG85 94 aa9.79□□□□□ -0.84
SSBP3-201ENST00000326956 Q8NAQ8 132 aa9.78□□□□□ -0.84
SSBP3-201ENST00000326956 F8WEM9 126 aa9.78□□□□□ -0.84
SSBP3-201ENST00000326956 TRBV7-6A0A0J9YX20 115 aa9.76□□□□□ -0.85
SSBP3-201ENST00000326956 M0R378 163 aa9.76□□□□□ -0.85
SSBP3-201ENST00000326956 VPREB1P12018 145 aa9.75□□□□□ -0.85
SSBP3-201ENST00000326956 EGFEM1PQ0D2K5 195 aa9.75□□□□□ -0.85
SSBP3-201ENST00000326956 TM2D3Q9BRN9 247 aa9.75□□□□□ -0.85
SSBP3-201ENST00000326956 NDUFC1O43677 76 aa9.74□□□□□ -0.85
SSBP3-201ENST00000326956 NREPQ16612 68 aa9.73□□□□□ -0.85
SSBP3-201ENST00000326956 SMR3AQ99954 134 aa9.73□□□□□ -0.85
SSBP3-201ENST00000326956 BPY2O14599 106 aa9.72□□□□□ -0.85
SSBP3-201ENST00000326956 TENM4Q6N022 2769 aa9.72□□□□□ -0.85
SSBP3-201ENST00000326956 Q6ZRU5 148 aa9.72□□□□□ -0.85
SSBP3-201ENST00000326956 WFDC10BQ8IUB3 73 aa9.7□□□□□ -0.86
SSBP3-201ENST00000326956 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
SSBP3-201ENST00000326956 Q8N9L7 120 aa9.69□□□□□ -0.86
SSBP3-201ENST00000326956 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
SSBP3-201ENST00000326956 DEFB105AQ8NG35 78 aa9.69□□□□□ -0.86
SSBP3-201ENST00000326956 SMIM26A0A096LP01 95 aa9.68□□□□□ -0.86
SSBP3-201ENST00000326956 TMEM254Q8TBM7 123 aa9.68□□□□□ -0.86
SSBP3-201ENST00000326956 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
SSBP3-201ENST00000326956 ATP5EP56381 51 aaPredicted RBP9.67□□□□□ -0.86
SSBP3-201ENST00000326956 KPRPQ5T749 579 aaPredicted RBP9.67□□□□□ -0.86
SSBP3-201ENST00000326956 NOTCH2Q04721 2471 aa9.67□□□□□ -0.86
SSBP3-201ENST00000326956 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
SSBP3-201ENST00000326956 PDZD2O15018 2839 aa9.67□□□□□ -0.86
SSBP3-201ENST00000326956 EPM2AB3EWF7 344 aa9.66□□□□□ -0.86
SSBP3-201ENST00000326956 V9GYY9 64 aa9.66□□□□□ -0.86
SSBP3-201ENST00000326956 ITPR2Q14571 2701 aa9.66□□□□□ -0.86
SSBP3-201ENST00000326956 IGKV2D-24A0A075B6R9 120 aa9.65□□□□□ -0.87
SSBP3-201ENST00000326956 C15orf56Q8N910 161 aa9.64□□□□□ -0.87
SSBP3-201ENST00000326956 VWFP04275 2813 aa9.64□□□□□ -0.87
SSBP3-201ENST00000326956 IGKV4-1P06312 121 aa9.63□□□□□ -0.87
SSBP3-201ENST00000326956 ERC2-IT1O76042 136 aa9.63□□□□□ -0.87
SSBP3-201ENST00000326956 Q6ZRP5 223 aa9.63□□□□□ -0.87
SSBP3-201ENST00000326956 SYCNQ0VAF6 134 aa9.62□□□□□ -0.87
SSBP3-201ENST00000326956 ANK3Q12955 4377 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms