RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 FAM19A4Q96LR4 140 aa8.87□□□□□ -0.99
FN1-201ENST00000323926 IGHV3OR16-9A0A0B4J2B5 98 aa8.86□□□□□ -0.99
FN1-201ENST00000323926 A0A087WSZ3 146 aa8.86□□□□□ -0.99
FN1-201ENST00000323926 MOBPQ13875 183 aa8.86□□□□□ -0.99
FN1-201ENST00000323926 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
FN1-201ENST00000323926 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
FN1-201ENST00000323926 ERC2-IT1O76042 136 aa8.85□□□□□ -0.99
FN1-201ENST00000323926 C11orf72Q8NBR9 251 aa8.85□□□□□ -0.99
FN1-201ENST00000323926 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
FN1-201ENST00000323926 CRYGAP11844 174 aa8.85□□□□□ -0.99
FN1-201ENST00000323926 TRAV22A0A0B4J277 110 aa8.84□□□□□ -0.99
FN1-201ENST00000323926 C16orf90A8MZG2 172 aa8.84□□□□□ -0.99
FN1-201ENST00000323926 C9orf116Q5BN46 136 aaPredicted RBP8.83□□□□□ -1
FN1-201ENST00000323926 Q8NBF4 154 aa8.83□□□□□ -1
FN1-201ENST00000323926 FAM229AH3BQW9 127 aa8.82□□□□□ -1
FN1-201ENST00000323926 AVPP01185 164 aa8.82□□□□□ -1
FN1-201ENST00000323926 Q6ZRP5 223 aa8.82□□□□□ -1
FN1-201ENST00000323926 C7orf65Q6ZTY9 151 aa8.82□□□□□ -1
FN1-201ENST00000323926 DNAH12Q6ZR08 3092 aa8.82□□□□□ -1
FN1-201ENST00000323926 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
FN1-201ENST00000323926 A0A1B0GU69 56 aa8.81□□□□□ -1
FN1-201ENST00000323926 ELOF1P60002 83 aaKnown RBP8.81□□□□□ -1
FN1-201ENST00000323926 C8orf87E5RJ46 101 aa8.81□□□□□ -1
FN1-201ENST00000323926 TSPEAR-AS2P59090 65 aa8.81□□□□□ -1
FN1-201ENST00000323926 PRO0628Q9UI54 55 aa8.81□□□□□ -1
FN1-201ENST00000323926 C22orf24Q9Y442 160 aa8.81□□□□□ -1
FN1-201ENST00000323926 TRBV7-4A0A0J9YYF1 115 aa8.8□□□□□ -1
FN1-201ENST00000323926 LINC00310P59036 64 aa8.8□□□□□ -1
FN1-201ENST00000323926 TEX15Q9BXT5 2789 aa8.8□□□□□ -1
FN1-201ENST00000323926 Q6ZRX8 168 aa8.8□□□□□ -1
FN1-201ENST00000323926 CHD6Q8TD26 2715 aa8.8□□□□□ -1
FN1-201ENST00000323926 UNC79Q9P2D8 2635 aa8.79□□□□□ -1
FN1-201ENST00000323926 GAS8-AS1O95177 125 aa8.79□□□□□ -1
FN1-201ENST00000323926 KLK9Q2XQG4 91 aa8.79□□□□□ -1
FN1-201ENST00000323926 LOC101927531A0A1B0GV80 90 aa8.79□□□□□ -1
FN1-201ENST00000323926 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
FN1-201ENST00000323926 URB1-AS1Q96HZ7 61 aa8.79□□□□□ -1
FN1-201ENST00000323926 LINC00313P59037 77 aa8.78□□□□□ -1
FN1-201ENST00000323926 Q6ZRU5 148 aa8.78□□□□□ -1
FN1-201ENST00000323926 C6orf48Q9UBA6 75 aa8.78□□□□□ -1
FN1-201ENST00000323926 DNAH10OSP0CZ25 163 aa8.77□□□□□ -1
FN1-201ENST00000323926 SPAG11AQ6PDA7 123 aa8.77□□□□□ -1.01
FN1-201ENST00000323926 RETNQ9HD89 108 aa8.77□□□□□ -1.01
FN1-201ENST00000323926 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
FN1-201ENST00000323926 PLA2G1BP04054 148 aaKnown RBP8.76□□□□□ -1.01
FN1-201ENST00000323926 SMCR5Q8TEV8 140 aa8.76□□□□□ -1.01
FN1-201ENST00000323926 A0A096LNJ9 63 aa8.76□□□□□ -1.01
FN1-201ENST00000323926 SPATA3Q8NHX4 192 aa8.75□□□□□ -1.01
FN1-201ENST00000323926 PRR3P79522 188 aaKnown RBP8.75□□□□□ -1.01
FN1-201ENST00000323926 PRR4Q16378 134 aa8.74□□□□□ -1.01
FN1-201ENST00000323926 X6R8D5 127 aa8.74□□□□□ -1.01
FN1-201ENST00000323926 SRCAPQ6ZRS2 3230 aa8.74□□□□□ -1.01
FN1-201ENST00000323926 PRLHP81277 87 aa8.74□□□□□ -1.01
FN1-201ENST00000323926 MDFIQ99750 246 aa8.74□□□□□ -1.01
FN1-201ENST00000323926 ITPR2Q14571 2701 aa8.73□□□□□ -1.01
FN1-201ENST00000323926 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
FN1-201ENST00000323926 VPREB1P12018 145 aa8.72□□□□□ -1.01
FN1-201ENST00000323926 KIAA0087Q14695 138 aa8.72□□□□□ -1.01
FN1-201ENST00000323926 CDSNQ15517 529 aa8.72□□□□□ -1.01
FN1-201ENST00000323926 IGKV2D-30A0A075B6S6 120 aa8.72□□□□□ -1.01
FN1-201ENST00000323926 PRM2P04554 102 aa8.72□□□□□ -1.01
FN1-201ENST00000323926 IGKV2-30P06310 120 aa8.72□□□□□ -1.01
FN1-201ENST00000323926 Q6ZQT0 140 aa8.71□□□□□ -1.02
FN1-201ENST00000323926 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.02
FN1-201ENST00000323926 PSPHP1O15172 72 aa8.7□□□□□ -1.02
FN1-201ENST00000323926 IGLV6-57P01721 117 aa8.7□□□□□ -1.02
FN1-201ENST00000323926 Q6ZSN1 163 aa8.7□□□□□ -1.02
FN1-201ENST00000323926 LINC00167Q96N53 147 aa8.69□□□□□ -1.02
FN1-201ENST00000323926 TYMSOSQ8TAI1 123 aa8.69□□□□□ -1.02
FN1-201ENST00000323926 A8MWP4 228 aa8.68□□□□□ -1.02
FN1-201ENST00000323926 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
FN1-201ENST00000323926 NOTCH1P46531 2555 aa8.67□□□□□ -1.02
FN1-201ENST00000323926 PCOTHQ58A44 107 aa8.67□□□□□ -1.02
FN1-201ENST00000323926 ATP11AUNQ6ZP68 121 aa8.67□□□□□ -1.02
FN1-201ENST00000323926 COL6A5A8TX70 2615 aa8.66□□□□□ -1.02
FN1-201ENST00000323926 SOSTDC1Q6X4U4 206 aa8.66□□□□□ -1.02
FN1-201ENST00000323926 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.02
FN1-201ENST00000323926 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
FN1-201ENST00000323926 LINC00315P59091 139 aa8.65□□□□□ -1.03
FN1-201ENST00000323926 SMIM29Q86T20 159 aa8.65□□□□□ -1.03
FN1-201ENST00000323926 A0A087WVE0 104 aa8.64□□□□□ -1.03
FN1-201ENST00000323926 CDIP1Q9H305 208 aa8.64□□□□□ -1.03
FN1-201ENST00000323926 SMR3AQ99954 134 aa8.63□□□□□ -1.03
FN1-201ENST00000323926 Q8NAQ8 132 aa8.63□□□□□ -1.03
FN1-201ENST00000323926 PLA2G2DQ9UNK4 145 aa8.63□□□□□ -1.03
FN1-201ENST00000323926 CEP350Q5VT06 3117 aa8.62□□□□□ -1.03
FN1-201ENST00000323926 RTL8CO15255 209 aa8.62□□□□□ -1.03
FN1-201ENST00000323926 SPACA4Q8TDM5 124 aa8.62□□□□□ -1.03
FN1-201ENST00000323926 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
FN1-201ENST00000323926 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
FN1-201ENST00000323926 WWC2-AS2Q96NR7 200 aa8.61□□□□□ -1.03
FN1-201ENST00000323926 A0A1W2PPR1 153 aa8.61□□□□□ -1.03
FN1-201ENST00000323926 KRTAP10-9P60411 292 aa8.61□□□□□ -1.03
FN1-201ENST00000323926 GOLGB1Q14789 3259 aaKnown RBP8.61□□□□□ -1.03
FN1-201ENST00000323926 SPINK1P00995 79 aa8.6□□□□□ -1.03
FN1-201ENST00000323926 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
FN1-201ENST00000323926 KCNQ1DNQ9H478 68 aa8.6□□□□□ -1.03
FN1-201ENST00000323926 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
FN1-201ENST00000323926 ZNF292O60281 2723 aa8.58□□□□□ -1.04
FN1-201ENST00000323926 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms