RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 VPREB1P12018 145 aa7.34□□□□□ -1.23
SNRNP200-201ENST00000323853 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
SNRNP200-201ENST00000323853 TM2D3Q9BRN9 247 aa7.34□□□□□ -1.23
SNRNP200-201ENST00000323853 FAM208BQ5VWN6 2430 aa7.34□□□□□ -1.23
SNRNP200-201ENST00000323853 PRRC2AP48634 2157 aaKnown RBP7.34□□□□□ -1.23
SNRNP200-201ENST00000323853 ACYP2P14621 99 aa7.33□□□□□ -1.24
SNRNP200-201ENST00000323853 PRO0628Q9UI54 55 aa7.33□□□□□ -1.24
SNRNP200-201ENST00000323853 NBDYA0A0U1RRE5 68 aa7.33□□□□□ -1.24
SNRNP200-201ENST00000323853 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
SNRNP200-201ENST00000323853 CHTF8P0CG12 524 aa7.33□□□□□ -1.24
SNRNP200-201ENST00000323853 FAM168BA1KXE4 195 aa7.32□□□□□ -1.24
SNRNP200-201ENST00000323853 DNAH10OSP0CZ25 163 aa7.32□□□□□ -1.24
SNRNP200-201ENST00000323853 SPACA4Q8TDM5 124 aa7.32□□□□□ -1.24
SNRNP200-201ENST00000323853 A0A1B0GU69 56 aa7.31□□□□□ -1.24
SNRNP200-201ENST00000323853 TRBV7-4A0A0J9YYF1 115 aa7.31□□□□□ -1.24
SNRNP200-201ENST00000323853 CREBBPQ92793 2442 aa7.31□□□□□ -1.24
SNRNP200-201ENST00000323853 SERTAD4-AS1Q5TG53 156 aa7.3□□□□□ -1.24
SNRNP200-201ENST00000323853 IGLV1-50A0A075B6I6 118 aa7.3□□□□□ -1.24
SNRNP200-201ENST00000323853 LINC00313P59037 77 aa7.28□□□□□ -1.24
SNRNP200-201ENST00000323853 A0A096LNT2 108 aa7.28□□□□□ -1.24
SNRNP200-201ENST00000323853 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
SNRNP200-201ENST00000323853 KCNQ1DNQ9H478 68 aa7.27□□□□□ -1.25
SNRNP200-201ENST00000323853 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.25
SNRNP200-201ENST00000323853 SPAG11AQ6PDA7 123 aa7.27□□□□□ -1.25
SNRNP200-201ENST00000323853 A8MWP4 228 aa7.26□□□□□ -1.25
SNRNP200-201ENST00000323853 ERC2-IT1O76042 136 aa7.26□□□□□ -1.25
SNRNP200-201ENST00000323853 KRTAP10-11P60412 298 aa7.26□□□□□ -1.25
SNRNP200-201ENST00000323853 K7EQZ3 153 aa7.26□□□□□ -1.25
SNRNP200-201ENST00000323853 KRTAP10-3P60369 221 aa7.25□□□□□ -1.25
SNRNP200-201ENST00000323853 C15orf56Q8N910 161 aa7.25□□□□□ -1.25
SNRNP200-201ENST00000323853 WNK1Q9H4A3 2382 aa7.25□□□□□ -1.25
SNRNP200-201ENST00000323853 GIG44P09565 113 aaPredicted RBP7.24□□□□□ -1.25
SNRNP200-201ENST00000323853 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
SNRNP200-201ENST00000323853 PRR34Q9NV39 138 aa7.24□□□□□ -1.25
SNRNP200-201ENST00000323853 LINC00612Q8N6U2 182 aa7.23□□□□□ -1.25
SNRNP200-201ENST00000323853 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
SNRNP200-201ENST00000323853 C19orf73Q9NVV2 129 aa7.22□□□□□ -1.25
SNRNP200-201ENST00000323853 C9orf129Q5T035 196 aaKnown RBP7.21□□□□□ -1.25
SNRNP200-201ENST00000323853 C8orf87E5RJ46 101 aa7.21□□□□□ -1.26
SNRNP200-201ENST00000323853 IGFL1Q6UW32 110 aa7.21□□□□□ -1.26
SNRNP200-201ENST00000323853 SORL1Q92673 2214 aa7.21□□□□□ -1.26
SNRNP200-201ENST00000323853 LOC101927531A0A1B0GV80 90 aa7.2□□□□□ -1.26
SNRNP200-201ENST00000323853 MRPL34Q9BQ48 92 aaKnown RBP7.19□□□□□ -1.26
SNRNP200-201ENST00000323853 Q96NJ1 140 aa7.19□□□□□ -1.26
SNRNP200-201ENST00000323853 PLA2G2DQ9UNK4 145 aa7.19□□□□□ -1.26
SNRNP200-201ENST00000323853 CUL9Q8IWT3 2517 aa7.18□□□□□ -1.26
SNRNP200-201ENST00000323853 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
SNRNP200-201ENST00000323853 Q8N377 158 aa7.17□□□□□ -1.26
SNRNP200-201ENST00000323853 COA5Q86WW8 74 aa7.17□□□□□ -1.26
SNRNP200-201ENST00000323853 SPG11Q96JI7 2443 aa7.16□□□□□ -1.26
SNRNP200-201ENST00000323853 K7EIL1 84 aa7.15□□□□□ -1.26
SNRNP200-201ENST00000323853 CSPG4Q6UVK1 2322 aa7.15□□□□□ -1.26
SNRNP200-201ENST00000323853 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
SNRNP200-201ENST00000323853 TTC28Q96AY4 2481 aa7.14□□□□□ -1.27
SNRNP200-201ENST00000323853 C8orf17Q9NRJ1 99 aa7.13□□□□□ -1.27
SNRNP200-201ENST00000323853 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
SNRNP200-201ENST00000323853 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
SNRNP200-201ENST00000323853 NAV2Q8IVL1 2488 aa7.12□□□□□ -1.27
SNRNP200-201ENST00000323853 DSCR10P59022 87 aa7.12□□□□□ -1.27
SNRNP200-201ENST00000323853 ATP11AUNQ6ZP68 121 aa7.12□□□□□ -1.27
SNRNP200-201ENST00000323853 KRTAP1-3Q8IUG1 177 aa7.11□□□□□ -1.27
SNRNP200-201ENST00000323853 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
SNRNP200-201ENST00000323853 HIVEP3Q5T1R4 2406 aa7.11□□□□□ -1.27
SNRNP200-201ENST00000323853 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
SNRNP200-201ENST00000323853 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
SNRNP200-201ENST00000323853 PIEZO2Q9H5I5 2752 aa7.1□□□□□ -1.27
SNRNP200-201ENST00000323853 IGLV8-61A0A075B6I0 122 aa7.1□□□□□ -1.27
SNRNP200-201ENST00000323853 PLA2G1BP04054 148 aaKnown RBP7.1□□□□□ -1.27
SNRNP200-201ENST00000323853 ACACBO00763 2458 aa7.1□□□□□ -1.27
SNRNP200-201ENST00000323853 A8MUN3 132 aa7.1□□□□□ -1.27
SNRNP200-201ENST00000323853 CYP4F30PQ9H0H9 118 aa7.1□□□□□ -1.27
SNRNP200-201ENST00000323853 A0A0G2JQZ4 141 aa7.09□□□□□ -1.27
SNRNP200-201ENST00000323853 A0A1W2PNN7 141 aa7.09□□□□□ -1.27
SNRNP200-201ENST00000323853 ZNF861PO60384 105 aa7.08□□□□□ -1.28
SNRNP200-201ENST00000323853 BDP1A6H8Y1 2624 aa7.08□□□□□ -1.28
SNRNP200-201ENST00000323853 OBSCN-AS1Q96MR7 158 aa7.07□□□□□ -1.28
SNRNP200-201ENST00000323853 H7BZZ5 65 aa7.07□□□□□ -1.28
SNRNP200-201ENST00000323853 IGF2RP11717 2491 aa7.07□□□□□ -1.28
SNRNP200-201ENST00000323853 A0A087WTM6 91 aa7.07□□□□□ -1.28
SNRNP200-201ENST00000323853 CASC10Q5T4H9 136 aa7.06□□□□□ -1.28
SNRNP200-201ENST00000323853 ATRXP46100 2492 aa7.06□□□□□ -1.28
SNRNP200-201ENST00000323853 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
SNRNP200-201ENST00000323853 CNBPP62633 177 aaKnown RBP7.04□□□□□ -1.28
SNRNP200-201ENST00000323853 SSBP3-AS1Q7Z2R9 100 aa7.04□□□□□ -1.28
SNRNP200-201ENST00000323853 C9orf163Q8N9P6 203 aa7.04□□□□□ -1.28
SNRNP200-201ENST00000323853 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
SNRNP200-201ENST00000323853 PTPN13Q12923 2485 aa7.04□□□□□ -1.28
SNRNP200-201ENST00000323853 LINC01600Q96MT4 127 aa7.03□□□□□ -1.28
SNRNP200-201ENST00000323853 APLNQ9ULZ1 77 aa7.03□□□□□ -1.28
SNRNP200-201ENST00000323853 MUC4Q99102 2169 aa7.03□□□□□ -1.28
SNRNP200-201ENST00000323853 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
SNRNP200-201ENST00000323853 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
SNRNP200-201ENST00000323853 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
SNRNP200-201ENST00000323853 IGLV7-43P04211 117 aa7.01□□□□□ -1.29
SNRNP200-201ENST00000323853 SPRR4Q96PI1 79 aa7.01□□□□□ -1.29
SNRNP200-201ENST00000323853 ANAPC11Q9NYG5 84 aa7□□□□□ -1.29
SNRNP200-201ENST00000323853 UQCR11O14957 56 aa7□□□□□ -1.29
SNRNP200-201ENST00000323853 GOLGB1Q14789 3259 aaKnown RBP7□□□□□ -1.29
SNRNP200-201ENST00000323853 C9orf92A6NGG3 77 aa6.99□□□□□ -1.29
SNRNP200-201ENST00000323853 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms