RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 SRSF9Q13242 221 aaKnown RBP eCLIP9.5□□□□□ -0.89
TSFM-201ENST00000323833 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
TSFM-201ENST00000323833 PLA2G2DQ9UNK4 145 aa9.5□□□□□ -0.89
TSFM-201ENST00000323833 DMBT1Q9UGM3 2413 aaPredicted RBP9.5□□□□□ -0.89
TSFM-201ENST00000323833 OXTP01178 125 aa9.49□□□□□ -0.89
TSFM-201ENST00000323833 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
TSFM-201ENST00000323833 HERVK_113P61574 105 aa9.49□□□□□ -0.89
TSFM-201ENST00000323833 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
TSFM-201ENST00000323833 PLEKHB2Q96CS7 222 aa9.49□□□□□ -0.89
TSFM-201ENST00000323833 SMIM13P0DJ93 91 aa9.48□□□□□ -0.89
TSFM-201ENST00000323833 LBHQ53QV2 105 aaPredicted RBP9.48□□□□□ -0.89
TSFM-201ENST00000323833 MEIG1Q5JSS6 88 aa9.48□□□□□ -0.89
TSFM-201ENST00000323833 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
TSFM-201ENST00000323833 SPINK6Q6UWN8 80 aa9.48□□□□□ -0.89
TSFM-201ENST00000323833 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
TSFM-201ENST00000323833 TP73-AS1Q9UF72 201 aa9.48□□□□□ -0.89
TSFM-201ENST00000323833 IGLV5-37A0A075B6J1 123 aa9.47□□□□□ -0.89
TSFM-201ENST00000323833 MYMXA0A1B0GTQ4 84 aa9.47□□□□□ -0.89
TSFM-201ENST00000323833 J3QQQ9 107 aa9.47□□□□□ -0.89
TSFM-201ENST00000323833 KRTDAPP60985 99 aa9.47□□□□□ -0.89
TSFM-201ENST00000323833 HERV-K104P63124 156 aa9.47□□□□□ -0.89
TSFM-201ENST00000323833 LINC00167Q96N53 147 aa9.47□□□□□ -0.89
TSFM-201ENST00000323833 GAGE10A6NGK3 116 aa9.46□□□□□ -0.9
TSFM-201ENST00000323833 IGLV7-43P04211 117 aa9.46□□□□□ -0.9
TSFM-201ENST00000323833 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.9
TSFM-201ENST00000323833 RPL37AP8A6NKH3 93 aa9.45□□□□□ -0.9
TSFM-201ENST00000323833 VPREB1P12018 145 aa9.45□□□□□ -0.9
TSFM-201ENST00000323833 LGALS3P17931 250 aaKnown RBP9.45□□□□□ -0.9
TSFM-201ENST00000323833 Q8NDZ9 215 aa9.45□□□□□ -0.9
TSFM-201ENST00000323833 E9PLD3 99 aa9.43□□□□□ -0.9
TSFM-201ENST00000323833 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
TSFM-201ENST00000323833 HERC1Q15751 4861 aa9.42□□□□□ -0.9
TSFM-201ENST00000323833 TMEM238LA0A1B0GVL6 79 aa9.42□□□□□ -0.9
TSFM-201ENST00000323833 NMUP48645 174 aa9.42□□□□□ -0.9
TSFM-201ENST00000323833 RPL24P83731 157 aaKnown RBP9.42□□□□□ -0.9
TSFM-201ENST00000323833 HIST3H2BBQ8N257 126 aa9.42□□□□□ -0.9
TSFM-201ENST00000323833 LINC00587B1AMM8 73 aa9.41□□□□□ -0.9
TSFM-201ENST00000323833 IGKV2-28A0A075B6P5 120 aa9.4□□□□□ -0.9
TSFM-201ENST00000323833 IGKV2D-28P01615 120 aa9.4□□□□□ -0.9
TSFM-201ENST00000323833 MT1HL1P0DM35 61 aa9.4□□□□□ -0.9
TSFM-201ENST00000323833 REG3GQ6UW15 175 aa9.4□□□□□ -0.9
TSFM-201ENST00000323833 DAND5Q8N907 189 aa9.4□□□□□ -0.9
TSFM-201ENST00000323833 S100A6P06703 90 aa9.39□□□□□ -0.91
TSFM-201ENST00000323833 LINC01600Q96MT4 127 aa9.39□□□□□ -0.91
TSFM-201ENST00000323833 IGLV1-50A0A075B6I6 118 aa9.38□□□□□ -0.91
TSFM-201ENST00000323833 IGKV2D-26A0A0A0MRZ7 120 aa9.38□□□□□ -0.91
TSFM-201ENST00000323833 C20orf202A1L168 122 aa9.38□□□□□ -0.91
TSFM-201ENST00000323833 S100A2P29034 98 aa9.38□□□□□ -0.91
TSFM-201ENST00000323833 BOD1L2Q8IYS8 172 aa9.38□□□□□ -0.91
TSFM-201ENST00000323833 DIRC1Q969H9 104 aa9.38□□□□□ -0.91
TSFM-201ENST00000323833 HIST1H2BLQ99880 126 aa9.38□□□□□ -0.91
TSFM-201ENST00000323833 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
TSFM-201ENST00000323833 H0Y9J4 135 aa9.37□□□□□ -0.91
TSFM-201ENST00000323833 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
TSFM-201ENST00000323833 ZNF861PO60384 105 aa9.36□□□□□ -0.91
TSFM-201ENST00000323833 BCE1O60756 84 aa9.36□□□□□ -0.91
TSFM-201ENST00000323833 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
TSFM-201ENST00000323833 NCR3O14931 201 aa9.35□□□□□ -0.91
TSFM-201ENST00000323833 SNRPEP62304 92 aaKnown RBP9.35□□□□□ -0.91
TSFM-201ENST00000323833 TMEM238C9JI98 176 aa9.34□□□□□ -0.91
TSFM-201ENST00000323833 M0R378 163 aa9.34□□□□□ -0.91
TSFM-201ENST00000323833 ANKRD39Q53RE8 183 aa9.34□□□□□ -0.91
TSFM-201ENST00000323833 ADAMTSL4-AS1Q5T5F5 129 aa9.34□□□□□ -0.91
TSFM-201ENST00000323833 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
TSFM-201ENST00000323833 ZNF815PA8K554 130 aa9.33□□□□□ -0.92
TSFM-201ENST00000323833 NPC2P61916 151 aa9.33□□□□□ -0.92
TSFM-201ENST00000323833 ARL17AQ8IVW1 177 aa9.33□□□□□ -0.92
TSFM-201ENST00000323833 TNXBP22105 4242 aa9.33□□□□□ -0.92
TSFM-201ENST00000323833 TMEM126AQ9H061 195 aa9.32□□□□□ -0.92
TSFM-201ENST00000323833 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
TSFM-201ENST00000323833 RPL28P46779 137 aaKnown RBP9.31□□□□□ -0.92
TSFM-201ENST00000323833 UBE2AP49459 152 aa9.31□□□□□ -0.92
TSFM-201ENST00000323833 KRTAP10-8P60410 259 aa9.31□□□□□ -0.92
TSFM-201ENST00000323833 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
TSFM-201ENST00000323833 LITAFQ99732 161 aa9.31□□□□□ -0.92
TSFM-201ENST00000323833 MIEN1Q9BRT3 115 aa9.31□□□□□ -0.92
TSFM-201ENST00000323833 C5orf52A6NGY3 159 aa9.3□□□□□ -0.92
TSFM-201ENST00000323833 AKR1D1P51857 326 aa9.3□□□□□ -0.92
TSFM-201ENST00000323833 FAM19A1Q7Z5A9 133 aa9.3□□□□□ -0.92
TSFM-201ENST00000323833 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
TSFM-201ENST00000323833 KRTAP1-4P0C5Y4 121 aa9.29□□□□□ -0.92
TSFM-201ENST00000323833 PRLHP81277 87 aa9.29□□□□□ -0.92
TSFM-201ENST00000323833 TRBV10-3A0A0K0K1G6 114 aa9.28□□□□□ -0.92
TSFM-201ENST00000323833 TIMM17BO60830 172 aa9.28□□□□□ -0.92
TSFM-201ENST00000323833 PRR26Q8N8Z3 221 aa9.28□□□□□ -0.92
TSFM-201ENST00000323833 PCP2Q8IVA1 136 aa9.27□□□□□ -0.93
TSFM-201ENST00000323833 PRYO14603 147 aa9.26□□□□□ -0.93
TSFM-201ENST00000323833 NDUFC2O95298 119 aa9.26□□□□□ -0.93
TSFM-201ENST00000323833 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
TSFM-201ENST00000323833 LINC00308Q8TCZ7 52 aa9.26□□□□□ -0.93
TSFM-201ENST00000323833 SPANXB1Q9NS25 103 aaPredicted RBP9.26□□□□□ -0.93
TSFM-201ENST00000323833 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
TSFM-201ENST00000323833 KCNQ1DNQ9H478 68 aa9.25□□□□□ -0.93
TSFM-201ENST00000323833 DDTP30046 118 aa9.24□□□□□ -0.93
TSFM-201ENST00000323833 SCGB1D1O95968 90 aa9.23□□□□□ -0.93
TSFM-201ENST00000323833 SPRR1AP35321 89 aa9.22□□□□□ -0.93
TSFM-201ENST00000323833 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
TSFM-201ENST00000323833 HSBP1L1C9JCN9 74 aa9.21□□□□□ -0.94
TSFM-201ENST00000323833 SPANXDQ9BXN6 97 aa9.21□□□□□ -0.94
TSFM-201ENST00000323833 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms