RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 GATCO43716 136 aaKnown RBP1.42□□□□□ -2.18
HIF1A-201ENST00000323441 Q5XG85 94 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 TEX43Q6ZNM6 134 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 OCC1Q8TAD7 63 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 SMIM2Q9BVW6 85 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 EIF5A2Q9GZV4 153 aaKnown RBP1.42□□□□□ -2.18
HIF1A-201ENST00000323441 MED9Q9NWA0 146 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 GNG13Q9P2W3 67 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 FXYD6-FXYD2A0A087WZ82 144 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 A0A1B0GW15 77 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 HIGD1CA8MV81 97 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 MT1BP07438 61 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 HERVK_113P63121 156 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 RIGQ13278 110 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 FAM104BQ5XKR9 115 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 VPREB1P12018 145 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 RPL24P83731 157 aaKnown RBP1.41□□□□□ -2.18
HIF1A-201ENST00000323441 PDZD11Q5EBL8 140 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 C2orf66Q6UXQ4 117 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 IGKV2-28A0A075B6P5 120 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 TMEM250H0YL14 139 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 K7EMI3 77 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 IGKV2D-28P01615 120 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 PPBPP02775 128 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 SPRR1AP35321 89 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 COX17Q14061 63 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 MRPL51Q4U2R6 128 aaKnown RBP1.41□□□□□ -2.18
HIF1A-201ENST00000323441 CHTOPQ9Y3Y2 248 aaKnown RBP1.41□□□□□ -2.18
HIF1A-201ENST00000323441 IGLV5-45A0A087WSX0 123 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 GAGE10A6NGK3 116 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 A6NN06 94 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 HMSDA8MTL9 139 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 TMEM238C9JI98 176 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 SMKR1H3BMG3 65 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 IGLV6-57P01721 117 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 OSTCQ9NRP0 149 aa1.41□□□□□ -2.18
HIF1A-201ENST00000323441 PRYO14603 147 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 ARPC5O15511 151 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 PAPPA-AS1Q5QFB9 102 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 LIMD2Q9BT23 127 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 TOMM7Q9P0U1 55 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 A0A1B0GV50 99 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 C5orf52A6NGY3 159 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 SMIM1B2RUZ4 78 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 CKS2P33552 79 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 COX7B2Q8TF08 81 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 HIGD2AQ9BW72 106 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 CDKN2A-AS1Q9UH64 79 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 LAMTOR2Q9Y2Q5 125 aa1.4□□□□□ -2.19
HIF1A-201ENST00000323441 C9orf92A6NGG3 77 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 IGIPA6NJ69 53 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 C6orf99Q4VX62 202 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 FAM74A3Q4VXF1 159 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 SFTA2Q6UW10 78 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 Q75L30 129 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 VCX2Q9H322 139 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 NAT8BQ9UHF3 227 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 TINCRA0A1B0GVN0 87 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 KANTRA0A1W2PQU2 76 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 F8W036 122 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 S100A8P05109 93 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 RAB5AP20339 215 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 G0S2P27469 103 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 TIMM17AQ99595 171 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 KCNQ1DNQ9H478 68 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 CYSLTR1Q9Y271 337 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 V9GYV3 84 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 SMIM27A0A1W2PRY6 76 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 MOBPQ13875 183 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 ORMDL2Q53FV1 153 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 SMCR5Q8TEV8 140 aa1.39□□□□□ -2.19
HIF1A-201ENST00000323441 LINC01549A6NIU2 74 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 D6R8Y8 96 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 SCO1O75880 301 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 ATP5LO75964 103 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 NPYP01303 97 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 CD164Q04900 197 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 KIAA1644Q3SXP7 199 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 AKAP14Q86UN6 197 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 C20orf166-AS1Q96NR2 134 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 SND1-IT1Q9HBX3 110 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 hCG_2014768A0A024R1R8 64 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 A0A1B0GXF2 115 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 CEBPGP53567 150 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 ORMDL3Q8N138 153 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 IGLV5-39A0A0G2JS06 123 aa1.38□□□□□ -2.19
HIF1A-201ENST00000323441 TRAV9-1A0A075B6T8 112 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 TRIAP1O43715 76 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 ATP5L2Q7Z4Y8 100 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 Q8N8P6 123 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 Q8NDZ9 215 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 ERG28Q9UKR5 140 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 IGLV9-49A0A0B4J1Y8 123 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 Q6Q795 121 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 ALKAL2Q6UX46 152 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 FA2HQ7L5A8 372 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 Q8N9P0 234 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms