RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 NDUFA12Q9UI09 145 aa17.63■□□□□ 0.41
SYNGR1-202ENST00000318801 PLEKHB2Q96CS7 222 aa17.62■□□□□ 0.41
SYNGR1-202ENST00000318801 A0A0U1RRA0 63 aa17.61■□□□□ 0.41
SYNGR1-202ENST00000318801 VPREB1P12018 145 aa17.61■□□□□ 0.41
SYNGR1-202ENST00000318801 IGLV1-50A0A075B6I6 118 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BKO60814 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 IGKCP01834 107 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BJP06899 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BOP23527 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BBP33778 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BDP58876 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BCP62807 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST2H2BEQ16778 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BHQ93079 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BNQ99877 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 HIST1H2BMQ99879 126 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 TNXBP22105 4242 aa17.6■□□□□ 0.41
SYNGR1-202ENST00000318801 IGKV2-28A0A075B6P5 120 aa17.59■□□□□ 0.41
SYNGR1-202ENST00000318801 LEPROTO15243 131 aa17.59■□□□□ 0.41
SYNGR1-202ENST00000318801 IGKV2D-28P01615 120 aa17.59■□□□□ 0.41
SYNGR1-202ENST00000318801 SMIM13P0DJ93 91 aa17.58■□□□□ 0.4
SYNGR1-202ENST00000318801 UBE2AP49459 152 aa17.58■□□□□ 0.4
SYNGR1-202ENST00000318801 PRR26Q8N8Z3 221 aa17.58■□□□□ 0.4
SYNGR1-202ENST00000318801 RPL13AP40429 203 aaKnown RBP17.56■□□□□ 0.4
SYNGR1-202ENST00000318801 PMCHL2Q9BQD1 86 aa17.55■□□□□ 0.4
SYNGR1-202ENST00000318801 J3QQQ9 107 aa17.53■□□□□ 0.4
SYNGR1-202ENST00000318801 KRTAP1-4P0C5Y4 121 aa17.53■□□□□ 0.4
SYNGR1-202ENST00000318801 LGALS3P17931 250 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-202ENST00000318801 NMUP48645 174 aa17.53■□□□□ 0.4
SYNGR1-202ENST00000318801 MIR7-3HGQ8N6C7 128 aa17.53■□□□□ 0.4
SYNGR1-202ENST00000318801 M0R378 163 aa17.51■□□□□ 0.39
SYNGR1-202ENST00000318801 BOD1L2Q8IYS8 172 aa17.51■□□□□ 0.39
SYNGR1-202ENST00000318801 TMEM126AQ9H061 195 aa17.49■□□□□ 0.39
SYNGR1-202ENST00000318801 HMCN2Q8NDA2 5059 aa17.49■□□□□ 0.39
SYNGR1-202ENST00000318801 SYS1-DBNDD2H3BUS1 97 aa17.48■□□□□ 0.39
SYNGR1-202ENST00000318801 FAM19A1Q7Z5A9 133 aa17.47■□□□□ 0.39
SYNGR1-202ENST00000318801 TSPEAR-AS2P59090 65 aa17.46■□□□□ 0.39
SYNGR1-202ENST00000318801 Q8NDZ9 215 aa17.45■□□□□ 0.38
SYNGR1-202ENST00000318801 IGKV2D-26A0A0A0MRZ7 120 aa17.44■□□□□ 0.38
SYNGR1-202ENST00000318801 TMEM238C9JI98 176 aa17.44■□□□□ 0.38
SYNGR1-202ENST00000318801 S100A12P80511 92 aa17.42■□□□□ 0.38
SYNGR1-202ENST00000318801 PET117Q6UWS5 81 aa17.42■□□□□ 0.38
SYNGR1-202ENST00000318801 KRTAP13-1Q8IUC0 172 aa17.42■□□□□ 0.38
SYNGR1-202ENST00000318801 MIEN1Q9BRT3 115 aa17.42■□□□□ 0.38
SYNGR1-202ENST00000318801 E9PLD3 99 aa17.4■□□□□ 0.38
SYNGR1-202ENST00000318801 CRYGAP11844 174 aa17.4■□□□□ 0.38
SYNGR1-202ENST00000318801 PRLHP81277 87 aa17.4■□□□□ 0.38
SYNGR1-202ENST00000318801 COA6Q5JTJ3 125 aaKnown RBP17.39■□□□□ 0.37
SYNGR1-202ENST00000318801 NCR3O14931 201 aa17.38■□□□□ 0.37
SYNGR1-202ENST00000318801 LINC01545Q5VT33 79 aa17.38■□□□□ 0.37
SYNGR1-202ENST00000318801 LOC107984156A0A0G2JMH3 177 aa17.36■□□□□ 0.37
SYNGR1-202ENST00000318801 ARL17AQ8IVW1 177 aa17.36■□□□□ 0.37
SYNGR1-202ENST00000318801 DAND5Q8N907 189 aa17.36■□□□□ 0.37
SYNGR1-202ENST00000318801 PRYO14603 147 aa17.35■□□□□ 0.37
SYNGR1-202ENST00000318801 S100A1P23297 94 aa17.33■□□□□ 0.36
SYNGR1-202ENST00000318801 KRTDAPP60985 99 aa17.32■□□□□ 0.36
SYNGR1-202ENST00000318801 C3orf79P0CE67 100 aa17.31■□□□□ 0.36
SYNGR1-202ENST00000318801 FAM229BQ4G0N7 80 aa17.31■□□□□ 0.36
SYNGR1-202ENST00000318801 TYMSOSQ8TAI1 123 aa17.31■□□□□ 0.36
SYNGR1-202ENST00000318801 KCNQ1DNQ9H478 68 aa17.31■□□□□ 0.36
SYNGR1-202ENST00000318801 A0A0J9YXY3 114 aa17.3■□□□□ 0.36
SYNGR1-202ENST00000318801 TRBV10-2A0A0K0K1G8 114 aa17.3■□□□□ 0.36
SYNGR1-202ENST00000318801 C20orf202A1L168 122 aa17.3■□□□□ 0.36
SYNGR1-202ENST00000318801 HIGD2AQ9BW72 106 aa17.3■□□□□ 0.36
SYNGR1-202ENST00000318801 A0A087X002 238 aa17.28■□□□□ 0.36
SYNGR1-202ENST00000318801 TRBV10-3A0A0K0K1G6 114 aa17.28■□□□□ 0.36
SYNGR1-202ENST00000318801 ETDCA0A1B0GVM5 59 aa17.28■□□□□ 0.36
SYNGR1-202ENST00000318801 LINC00337Q8N6G1 96 aa17.28■□□□□ 0.36
SYNGR1-202ENST00000318801 SPANXB1Q9NS25 103 aaPredicted RBP17.28■□□□□ 0.36
SYNGR1-202ENST00000318801 NDUFC2O95298 119 aa17.27■□□□□ 0.35
SYNGR1-202ENST00000318801 AKR1D1P51857 326 aa17.26■□□□□ 0.35
SYNGR1-202ENST00000318801 ANAPC11Q9NYG5 84 aa17.26■□□□□ 0.35
SYNGR1-202ENST00000318801 DDTP30046 118 aa17.25■□□□□ 0.35
SYNGR1-202ENST00000318801 S100A7L2Q5SY68 101 aa17.25■□□□□ 0.35
SYNGR1-202ENST00000318801 ZNF706Q9Y5V0 76 aaPredicted RBP17.23■□□□□ 0.35
SYNGR1-202ENST00000318801 SPRR1AP35321 89 aa17.22■□□□□ 0.35
SYNGR1-202ENST00000318801 ZNF815PA8K554 130 aa17.21■□□□□ 0.35
SYNGR1-202ENST00000318801 ADAMTSL4-AS1Q5T5F5 129 aa17.21■□□□□ 0.35
SYNGR1-202ENST00000318801 TIMM17BO60830 172 aa17.2■□□□□ 0.34
SYNGR1-202ENST00000318801 NPC2P61916 151 aa17.2■□□□□ 0.34
SYNGR1-202ENST00000318801 CBY1Q9Y3M2 126 aa17.19■□□□□ 0.34
SYNGR1-202ENST00000318801 TSPAN13O95857 204 aa17.15■□□□□ 0.34
SYNGR1-202ENST00000318801 UBR4Q5T4S7 5183 aa17.15■□□□□ 0.34
SYNGR1-202ENST00000318801 S100A2P29034 98 aa17.15■□□□□ 0.34
SYNGR1-202ENST00000318801 KRTAP4-16G5E9R7 235 aaPredicted RBP17.14■□□□□ 0.33
SYNGR1-202ENST00000318801 KRTAP13-2Q52LG2 175 aa17.14■□□□□ 0.33
SYNGR1-202ENST00000318801 IGLV6-57P01721 117 aa17.13■□□□□ 0.33
SYNGR1-202ENST00000318801 SOSTDC1Q6X4U4 206 aa17.13■□□□□ 0.33
SYNGR1-202ENST00000318801 LINC00308Q8TCZ7 52 aa17.13■□□□□ 0.33
SYNGR1-202ENST00000318801 SMCR5Q8TEV8 140 aa17.13■□□□□ 0.33
SYNGR1-202ENST00000318801 SPRR4Q96PI1 79 aa17.13■□□□□ 0.33
SYNGR1-202ENST00000318801 SPANXCQ9NY87 97 aa17.13■□□□□ 0.33
SYNGR1-202ENST00000318801 SCGB1D4Q6XE38 83 aa17.12■□□□□ 0.33
SYNGR1-202ENST00000318801 PRR4Q16378 134 aa17.11■□□□□ 0.33
SYNGR1-202ENST00000318801 B5MCH6 92 aa17.1■□□□□ 0.33
SYNGR1-202ENST00000318801 S100A6P06703 90 aa17.1■□□□□ 0.33
SYNGR1-202ENST00000318801 JOSD1Q15040 202 aaPredicted RBP17.1■□□□□ 0.33
SYNGR1-202ENST00000318801 LINC00304Q8N9R0 145 aa17.1■□□□□ 0.33
SYNGR1-202ENST00000318801 LITAFQ99732 161 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms