RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 M0R2N4 97 aa13.01□□□□□ -0.33
HERPUD2-201ENST00000311350 LINC00336Q6ZUF6 198 aa13.01□□□□□ -0.33
HERPUD2-201ENST00000311350 LINC00167Q96N53 147 aa13.01□□□□□ -0.33
HERPUD2-201ENST00000311350 JMJD7-PLA2G4BH0Y9G9 81 aa13□□□□□ -0.33
HERPUD2-201ENST00000311350 C6orf226Q5I0X4 101 aa13□□□□□ -0.33
HERPUD2-201ENST00000311350 C11orf44Q8N8P7 122 aa13□□□□□ -0.33
HERPUD2-201ENST00000311350 KRTAP10-3P60369 221 aa12.99□□□□□ -0.33
HERPUD2-201ENST00000311350 ATP5EP2Q5VTU8 51 aa12.99□□□□□ -0.33
HERPUD2-201ENST00000311350 SNURFQ9Y675 71 aa12.99□□□□□ -0.33
HERPUD2-201ENST00000311350 TRRAPQ9Y4A5 3859 aa12.99□□□□□ -0.33
HERPUD2-201ENST00000311350 RPL35AP18077 110 aaKnown RBP12.99□□□□□ -0.33
HERPUD2-201ENST00000311350 LINC00612Q8N6U2 182 aa12.98□□□□□ -0.33
HERPUD2-201ENST00000311350 UBL5Q9BZL1 73 aa12.98□□□□□ -0.33
HERPUD2-201ENST00000311350 WNK1Q9H4A3 2382 aa12.98□□□□□ -0.33
HERPUD2-201ENST00000311350 TRAV10A0A0B4J240 114 aa12.98□□□□□ -0.33
HERPUD2-201ENST00000311350 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
HERPUD2-201ENST00000311350 TMEM256-PLSCR3K7ERE1 68 aa12.97□□□□□ -0.33
HERPUD2-201ENST00000311350 A0A1B0GUV1 79 aa12.96□□□□□ -0.33
HERPUD2-201ENST00000311350 RMI2Q96E14 147 aa12.96□□□□□ -0.33
HERPUD2-201ENST00000311350 EPM2AB3EWF7 344 aa12.96□□□□□ -0.34
HERPUD2-201ENST00000311350 WFDC10AQ9H1F0 79 aa12.96□□□□□ -0.34
HERPUD2-201ENST00000311350 MGAM2Q2M2H8 2515 aa12.95□□□□□ -0.34
HERPUD2-201ENST00000311350 PKD1L1Q8TDX9 2849 aa12.95□□□□□ -0.34
HERPUD2-201ENST00000311350 Q8IZM0 81 aa12.95□□□□□ -0.34
HERPUD2-201ENST00000311350 SERP1Q9Y6X1 66 aa12.95□□□□□ -0.34
HERPUD2-201ENST00000311350 MRAPQ8TCY5 172 aa12.93□□□□□ -0.34
HERPUD2-201ENST00000311350 CLPSL2Q6UWE3 100 aa12.93□□□□□ -0.34
HERPUD2-201ENST00000311350 TRBV10-3A0A0K0K1G6 114 aa12.92□□□□□ -0.34
HERPUD2-201ENST00000311350 TRAV7A0A075B6U4 112 aa12.91□□□□□ -0.34
HERPUD2-201ENST00000311350 HAMPP81172 84 aa12.91□□□□□ -0.34
HERPUD2-201ENST00000311350 Q8NDZ9 215 aa12.91□□□□□ -0.34
HERPUD2-201ENST00000311350 FP248Q71RG6 208 aaPredicted RBP12.91□□□□□ -0.34
HERPUD2-201ENST00000311350 LINC01547P58512 204 aaPredicted RBP12.9□□□□□ -0.34
HERPUD2-201ENST00000311350 C6orf99Q4VX62 202 aa12.9□□□□□ -0.34
HERPUD2-201ENST00000311350 Q6ZQT0 140 aa12.9□□□□□ -0.34
HERPUD2-201ENST00000311350 F8WEM9 126 aa12.89□□□□□ -0.35
HERPUD2-201ENST00000311350 C9orf116Q5BN46 136 aaPredicted RBP12.89□□□□□ -0.35
HERPUD2-201ENST00000311350 PRO0628Q9UI54 55 aa12.88□□□□□ -0.35
HERPUD2-201ENST00000311350 LINC00474Q9P2X8 69 aa12.88□□□□□ -0.35
HERPUD2-201ENST00000311350 GYPEP15421 78 aa12.87□□□□□ -0.35
HERPUD2-201ENST00000311350 RBM3P98179 157 aaKnown RBP12.87□□□□□ -0.35
HERPUD2-201ENST00000311350 COX17Q14061 63 aa12.87□□□□□ -0.35
HERPUD2-201ENST00000311350 VWFP04275 2813 aa12.87□□□□□ -0.35
HERPUD2-201ENST00000311350 LINC00482Q8N8I6 264 aa12.86□□□□□ -0.35
HERPUD2-201ENST00000311350 KLKP1Q107X0 134 aa12.86□□□□□ -0.35
HERPUD2-201ENST00000311350 Q6ZVQ6 151 aa12.86□□□□□ -0.35
HERPUD2-201ENST00000311350 LAMTOR3Q9UHA4 124 aa12.86□□□□□ -0.35
HERPUD2-201ENST00000311350 C1orf43Q9BWL3 253 aa12.85□□□□□ -0.35
HERPUD2-201ENST00000311350 PRO0255Q9UI72 69 aa12.85□□□□□ -0.35
HERPUD2-201ENST00000311350 SCXQ7RTU7 201 aa12.84□□□□□ -0.35
HERPUD2-201ENST00000311350 MEGF8Q7Z7M0 2845 aa12.84□□□□□ -0.35
HERPUD2-201ENST00000311350 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
HERPUD2-201ENST00000311350 DEFB130BP0DP73 79 aa12.83□□□□□ -0.36
HERPUD2-201ENST00000311350 DEFB130AP0DP74 79 aa12.83□□□□□ -0.36
HERPUD2-201ENST00000311350 LINC00575Q6W349 94 aa12.83□□□□□ -0.36
HERPUD2-201ENST00000311350 TM2D3Q9BRN9 247 aa12.83□□□□□ -0.36
HERPUD2-201ENST00000311350 IGHV4-28A0A0C4DH34 117 aa12.82□□□□□ -0.36
HERPUD2-201ENST00000311350 CD164L2Q6UWJ8 174 aa12.82□□□□□ -0.36
HERPUD2-201ENST00000311350 KIAA0087Q14695 138 aa12.81□□□□□ -0.36
HERPUD2-201ENST00000311350 CMYA5Q8N3K9 4069 aa12.81□□□□□ -0.36
HERPUD2-201ENST00000311350 MUC7Q8TAX7 377 aa12.8□□□□□ -0.36
HERPUD2-201ENST00000311350 X6R8D5 127 aa12.8□□□□□ -0.36
HERPUD2-201ENST00000311350 LYRM9A8MSI8 78 aa12.8□□□□□ -0.36
HERPUD2-201ENST00000311350 Q8N3U1 123 aa12.8□□□□□ -0.36
HERPUD2-201ENST00000311350 SMIM26A0A096LP01 95 aa12.79□□□□□ -0.36
HERPUD2-201ENST00000311350 A0A096LPF7 62 aa12.79□□□□□ -0.36
HERPUD2-201ENST00000311350 LOC110117498A0A087WWA1 95 aa12.79□□□□□ -0.36
HERPUD2-201ENST00000311350 TRBV7-6A0A0J9YX20 115 aa12.79□□□□□ -0.36
HERPUD2-201ENST00000311350 ZNF561-AS1K7EIQ3 104 aa12.79□□□□□ -0.36
HERPUD2-201ENST00000311350 LINC00269Q8N2A0 174 aa12.79□□□□□ -0.36
HERPUD2-201ENST00000311350 C6orf223Q8N319 242 aa12.78□□□□□ -0.36
HERPUD2-201ENST00000311350 BCE1O60756 84 aa12.77□□□□□ -0.37
HERPUD2-201ENST00000311350 IGLV10-54A0A075B6I4 117 aa12.77□□□□□ -0.37
HERPUD2-201ENST00000311350 Q6ZQY7 126 aa12.76□□□□□ -0.37
HERPUD2-201ENST00000311350 NBEAL2Q6ZNJ1 2754 aa12.74□□□□□ -0.37
HERPUD2-201ENST00000311350 CHCHD10Q8WYQ3 142 aaPredicted RBP12.74□□□□□ -0.37
HERPUD2-201ENST00000311350 FAM229BQ4G0N7 80 aa12.73□□□□□ -0.37
HERPUD2-201ENST00000311350 NOTCH1P46531 2555 aa12.73□□□□□ -0.37
HERPUD2-201ENST00000311350 TRBV7-4A0A0J9YYF1 115 aa12.72□□□□□ -0.37
HERPUD2-201ENST00000311350 A0A0U1RQV1 116 aa12.71□□□□□ -0.37
HERPUD2-201ENST00000311350 CXCL6P80162 114 aa12.71□□□□□ -0.37
HERPUD2-201ENST00000311350 C10orf25Q5T742 122 aa12.71□□□□□ -0.37
HERPUD2-201ENST00000311350 MIFP14174 115 aa12.7□□□□□ -0.38
HERPUD2-201ENST00000311350 BRK1Q8WUW1 75 aa12.7□□□□□ -0.38
HERPUD2-201ENST00000311350 REG3AQ06141 175 aa12.7□□□□□ -0.38
HERPUD2-201ENST00000311350 Q8N9L7 120 aa12.69□□□□□ -0.38
HERPUD2-201ENST00000311350 MPLKIPQ8TAP9 179 aa12.68□□□□□ -0.38
HERPUD2-201ENST00000311350 H3BQ85 93 aa12.68□□□□□ -0.38
HERPUD2-201ENST00000311350 NREPQ16612 68 aa12.67□□□□□ -0.38
HERPUD2-201ENST00000311350 UNQ6190/PRO20217Q6UXQ8 127 aa12.67□□□□□ -0.38
HERPUD2-201ENST00000311350 ANGP03950 147 aaKnown RBP12.67□□□□□ -0.38
HERPUD2-201ENST00000311350 C9orf66Q5T8R8 295 aa12.66□□□□□ -0.38
HERPUD2-201ENST00000311350 A0A0J9YWU9 116 aa12.66□□□□□ -0.38
HERPUD2-201ENST00000311350 IGHV4-30-4P0DP06 118 aa12.66□□□□□ -0.38
HERPUD2-201ENST00000311350 OXLD1Q5BKU9 147 aa12.66□□□□□ -0.38
HERPUD2-201ENST00000311350 KPRPQ5T749 579 aaPredicted RBP12.65□□□□□ -0.38
HERPUD2-201ENST00000311350 TMEM254Q8TBM7 123 aa12.65□□□□□ -0.38
HERPUD2-201ENST00000311350 BPY2O14599 106 aa12.64□□□□□ -0.39
HERPUD2-201ENST00000311350 APOC4P55056 127 aa12.63□□□□□ -0.39
HERPUD2-201ENST00000311350 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms