RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 MRPL55Q7Z7F7 128 aaKnown RBP7.51□□□□□ -1.21
MUC4-201ENST00000308466 UPK3BQ9BT76 320 aa7.51□□□□□ -1.21
MUC4-201ENST00000308466 SMIM11BQ8TCY0 68 aa7.51□□□□□ -1.21
MUC4-201ENST00000308466 RMI2Q96E14 147 aa7.51□□□□□ -1.21
MUC4-201ENST00000308466 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
MUC4-201ENST00000308466 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
MUC4-201ENST00000308466 OXLD1Q5BKU9 147 aa7.5□□□□□ -1.21
MUC4-201ENST00000308466 ORMDL1Q9P0S3 153 aa7.5□□□□□ -1.21
MUC4-201ENST00000308466 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
MUC4-201ENST00000308466 A0A087WZ39 114 aa7.49□□□□□ -1.21
MUC4-201ENST00000308466 C9orf116Q5BN46 136 aaPredicted RBP7.49□□□□□ -1.21
MUC4-201ENST00000308466 SCXQ7RTU7 201 aa7.49□□□□□ -1.21
MUC4-201ENST00000308466 IGKV2D-24A0A075B6R9 120 aa7.49□□□□□ -1.21
MUC4-201ENST00000308466 IGHV3OR16-9A0A0B4J2B5 98 aa7.48□□□□□ -1.21
MUC4-201ENST00000308466 HIGD2BQ4VC39 106 aa7.48□□□□□ -1.21
MUC4-201ENST00000308466 NBPF19A0A087WUL8 3843 aa7.48□□□□□ -1.21
MUC4-201ENST00000308466 FAM104AQ969W3 186 aa7.48□□□□□ -1.21
MUC4-201ENST00000308466 XAGE1AQ9HD64 81 aa7.48□□□□□ -1.21
MUC4-201ENST00000308466 SPTSSBQ8NFR3 76 aa7.47□□□□□ -1.21
MUC4-201ENST00000308466 CAMK2N2Q96S95 79 aa7.47□□□□□ -1.21
MUC4-201ENST00000308466 IGHV4-30-4P0DP06 118 aa7.47□□□□□ -1.21
MUC4-201ENST00000308466 CD164L2Q6UWJ8 174 aa7.47□□□□□ -1.21
MUC4-201ENST00000308466 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
MUC4-201ENST00000308466 MIFP14174 115 aa7.46□□□□□ -1.21
MUC4-201ENST00000308466 Q6JHZ5 121 aa7.46□□□□□ -1.21
MUC4-201ENST00000308466 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.21
MUC4-201ENST00000308466 MAST4O15021 2626 aa7.46□□□□□ -1.22
MUC4-201ENST00000308466 PMAIP1Q13794 54 aa7.46□□□□□ -1.22
MUC4-201ENST00000308466 Q8N3U1 123 aa7.46□□□□□ -1.22
MUC4-201ENST00000308466 TRBV7-6A0A0J9YX20 115 aa7.45□□□□□ -1.22
MUC4-201ENST00000308466 CSNK1G2-AS1Q8NCQ2 148 aa7.45□□□□□ -1.22
MUC4-201ENST00000308466 ZFHX3Q15911 3703 aa7.45□□□□□ -1.22
MUC4-201ENST00000308466 PLAC8L1A1L4L8 177 aa7.45□□□□□ -1.22
MUC4-201ENST00000308466 KRTAP1-1Q07627 177 aa7.45□□□□□ -1.22
MUC4-201ENST00000308466 C6orf99Q4VX62 202 aa7.45□□□□□ -1.22
MUC4-201ENST00000308466 UNQ6190/PRO20217Q6UXQ8 127 aa7.44□□□□□ -1.22
MUC4-201ENST00000308466 X6R8D5 127 aa7.44□□□□□ -1.22
MUC4-201ENST00000308466 RPL28P46779 137 aaKnown RBP7.44□□□□□ -1.22
MUC4-201ENST00000308466 A0A087WYN8 130 aa7.43□□□□□ -1.22
MUC4-201ENST00000308466 Q8IZM0 81 aa7.43□□□□□ -1.22
MUC4-201ENST00000308466 CELA1Q9UNI1 258 aa7.43□□□□□ -1.22
MUC4-201ENST00000308466 KRTAP10-3P60369 221 aa7.43□□□□□ -1.22
MUC4-201ENST00000308466 FAM218AQ96MZ4 157 aa7.42□□□□□ -1.22
MUC4-201ENST00000308466 PSPHP1O15172 72 aa7.42□□□□□ -1.22
MUC4-201ENST00000308466 PRR4Q16378 134 aa7.42□□□□□ -1.22
MUC4-201ENST00000308466 C6orf223Q8N319 242 aa7.42□□□□□ -1.22
MUC4-201ENST00000308466 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.22
MUC4-201ENST00000308466 A0A1B0GUV1 79 aa7.41□□□□□ -1.22
MUC4-201ENST00000308466 MGAM2Q2M2H8 2515 aa7.41□□□□□ -1.22
MUC4-201ENST00000308466 CYSRT1A8MQ03 144 aa7.41□□□□□ -1.22
MUC4-201ENST00000308466 KPRPQ5T749 579 aaPredicted RBP7.41□□□□□ -1.22
MUC4-201ENST00000308466 LELP1Q5T871 98 aa7.41□□□□□ -1.22
MUC4-201ENST00000308466 KMT2BQ9UMN6 2715 aaPredicted RBP7.41□□□□□ -1.22
MUC4-201ENST00000308466 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.23
MUC4-201ENST00000308466 SPATA3Q8NHX4 192 aa7.4□□□□□ -1.23
MUC4-201ENST00000308466 NOTCH1P46531 2555 aa7.39□□□□□ -1.23
MUC4-201ENST00000308466 CCKP06307 115 aa7.39□□□□□ -1.23
MUC4-201ENST00000308466 DEFB131BA0A096LNP1 70 aa7.38□□□□□ -1.23
MUC4-201ENST00000308466 TMEM256-PLSCR3K7ERE1 68 aa7.38□□□□□ -1.23
MUC4-201ENST00000308466 DEFB105AQ8NG35 78 aa7.38□□□□□ -1.23
MUC4-201ENST00000308466 C11orf45Q8TAV5 145 aa7.38□□□□□ -1.23
MUC4-201ENST00000308466 NANOS2P60321 138 aaKnown RBP7.38□□□□□ -1.23
MUC4-201ENST00000308466 IGKV2-28A0A075B6P5 120 aa7.38□□□□□ -1.23
MUC4-201ENST00000308466 IGKV2D-28P01615 120 aa7.38□□□□□ -1.23
MUC4-201ENST00000308466 FUSP35637 526 aaKnown RBP eCLIP7.38□□□□□ -1.23
MUC4-201ENST00000308466 JMJD7-PLA2G4BH0Y9G9 81 aa7.37□□□□□ -1.23
MUC4-201ENST00000308466 Q6ZTC4 211 aa7.37□□□□□ -1.23
MUC4-201ENST00000308466 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
MUC4-201ENST00000308466 HIVEP1P15822 2718 aa7.36□□□□□ -1.23
MUC4-201ENST00000308466 TRAV7A0A075B6U4 112 aa7.36□□□□□ -1.23
MUC4-201ENST00000308466 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
MUC4-201ENST00000308466 WFDC10BQ8IUB3 73 aa7.35□□□□□ -1.23
MUC4-201ENST00000308466 Q6ZQY7 126 aa7.35□□□□□ -1.23
MUC4-201ENST00000308466 PSCAO43653 123 aa7.34□□□□□ -1.23
MUC4-201ENST00000308466 C10orf25Q5T742 122 aa7.34□□□□□ -1.23
MUC4-201ENST00000308466 STAB1Q9NY15 2570 aa7.34□□□□□ -1.23
MUC4-201ENST00000308466 A0A0J9YWU9 116 aa7.34□□□□□ -1.23
MUC4-201ENST00000308466 UBE2DNLQ8IWF7 75 aa7.34□□□□□ -1.23
MUC4-201ENST00000308466 COX17Q14061 63 aa7.34□□□□□ -1.23
MUC4-201ENST00000308466 LYPD5Q6UWN5 251 aa7.34□□□□□ -1.23
MUC4-201ENST00000308466 BAHCC1Q9P281 2608 aa7.34□□□□□ -1.24
MUC4-201ENST00000308466 FAM19A3Q7Z5A8 133 aa7.33□□□□□ -1.24
MUC4-201ENST00000308466 H7BZZ5 65 aa7.32□□□□□ -1.24
MUC4-201ENST00000308466 OTOGQ6ZRI0 2925 aa7.32□□□□□ -1.24
MUC4-201ENST00000308466 COX7BP24311 80 aa7.32□□□□□ -1.24
MUC4-201ENST00000308466 Q8N814 137 aa7.32□□□□□ -1.24
MUC4-201ENST00000308466 Q8NAQ8 132 aa7.32□□□□□ -1.24
MUC4-201ENST00000308466 ZNF469Q96JG9 3925 aaPredicted RBP7.32□□□□□ -1.24
MUC4-201ENST00000308466 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
MUC4-201ENST00000308466 TRAV10A0A0B4J240 114 aa7.32□□□□□ -1.24
MUC4-201ENST00000308466 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
MUC4-201ENST00000308466 TRBV10-3A0A0K0K1G6 114 aa7.31□□□□□ -1.24
MUC4-201ENST00000308466 ATP5EP2Q5VTU8 51 aa7.31□□□□□ -1.24
MUC4-201ENST00000308466 PDZD2O15018 2839 aa7.3□□□□□ -1.24
MUC4-201ENST00000308466 NSD1Q96L73 2696 aaPredicted RBP7.29□□□□□ -1.24
MUC4-201ENST00000308466 SYCNQ0VAF6 134 aa7.29□□□□□ -1.24
MUC4-201ENST00000308466 ESRGQ1W209 222 aa7.29□□□□□ -1.24
MUC4-201ENST00000308466 NREPQ16612 68 aa7.28□□□□□ -1.24
MUC4-201ENST00000308466 TM2D3Q9BRN9 247 aa7.28□□□□□ -1.24
MUC4-201ENST00000308466 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms