RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CCKP06307 115 aa9.28□□□□□ -0.92
CASC4-201ENST00000299957 SMCR5Q8TEV8 140 aa9.28□□□□□ -0.92
CASC4-201ENST00000299957 Q8N814 137 aa9.28□□□□□ -0.92
CASC4-201ENST00000299957 C10orf25Q5T742 122 aa9.27□□□□□ -0.92
CASC4-201ENST00000299957 Q8IZM0 81 aa9.27□□□□□ -0.92
CASC4-201ENST00000299957 Q6Q795 121 aa9.27□□□□□ -0.93
CASC4-201ENST00000299957 PRR4Q16378 134 aa9.27□□□□□ -0.93
CASC4-201ENST00000299957 SERP2Q8N6R1 65 aa9.27□□□□□ -0.93
CASC4-201ENST00000299957 KPRPQ5T749 579 aaPredicted RBP9.26□□□□□ -0.93
CASC4-201ENST00000299957 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
CASC4-201ENST00000299957 LYRM9A8MSI8 78 aa9.26□□□□□ -0.93
CASC4-201ENST00000299957 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
CASC4-201ENST00000299957 Q8N9L7 120 aa9.26□□□□□ -0.93
CASC4-201ENST00000299957 M0QXV9 152 aa9.25□□□□□ -0.93
CASC4-201ENST00000299957 IGHV4-30-4P0DP06 118 aa9.25□□□□□ -0.93
CASC4-201ENST00000299957 HIGD2AQ9BW72 106 aa9.25□□□□□ -0.93
CASC4-201ENST00000299957 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
CASC4-201ENST00000299957 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
CASC4-201ENST00000299957 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
CASC4-201ENST00000299957 DEFB131BA0A096LNP1 70 aa9.23□□□□□ -0.93
CASC4-201ENST00000299957 FAM19A5Q7Z5A7 132 aaPredicted RBP9.23□□□□□ -0.93
CASC4-201ENST00000299957 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
CASC4-201ENST00000299957 NANOS2P60321 138 aaKnown RBP9.23□□□□□ -0.93
CASC4-201ENST00000299957 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.23□□□□□ -0.93
CASC4-201ENST00000299957 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
CASC4-201ENST00000299957 ZNF73O43830 326 aaPredicted RBP9.22□□□□□ -0.93
CASC4-201ENST00000299957 SMIM9A6NGZ8 99 aa9.22□□□□□ -0.93
CASC4-201ENST00000299957 BPY2O14599 106 aa9.22□□□□□ -0.93
CASC4-201ENST00000299957 Q6ZTC4 211 aa9.21□□□□□ -0.93
CASC4-201ENST00000299957 C11orf45Q8TAV5 145 aa9.21□□□□□ -0.93
CASC4-201ENST00000299957 LRCOL1A6NCL2 159 aa9.21□□□□□ -0.94
CASC4-201ENST00000299957 FAM104AQ969W3 186 aa9.21□□□□□ -0.94
CASC4-201ENST00000299957 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
CASC4-201ENST00000299957 HRCT1Q6UXD1 115 aa9.2□□□□□ -0.94
CASC4-201ENST00000299957 LELP1Q5T871 98 aa9.19□□□□□ -0.94
CASC4-201ENST00000299957 TRBV7-7A0A0K0K1E9 115 aa9.18□□□□□ -0.94
CASC4-201ENST00000299957 GIG44P09565 113 aaPredicted RBP9.18□□□□□ -0.94
CASC4-201ENST00000299957 SYCNQ0VAF6 134 aa9.18□□□□□ -0.94
CASC4-201ENST00000299957 Q6JHZ5 121 aa9.18□□□□□ -0.94
CASC4-201ENST00000299957 MIFP14174 115 aa9.18□□□□□ -0.94
CASC4-201ENST00000299957 CR1P17927 2039 aa9.17□□□□□ -0.94
CASC4-201ENST00000299957 FAM236DA0A1B0GTK5 79 aa9.17□□□□□ -0.94
CASC4-201ENST00000299957 FAM236CP0DP71 79 aa9.17□□□□□ -0.94
CASC4-201ENST00000299957 A0A0J9YWU9 116 aa9.16□□□□□ -0.94
CASC4-201ENST00000299957 A0A096LNT2 108 aa9.15□□□□□ -0.94
CASC4-201ENST00000299957 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.94
CASC4-201ENST00000299957 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
CASC4-201ENST00000299957 A0A0U1RQV1 116 aa9.15□□□□□ -0.95
CASC4-201ENST00000299957 X6R8D5 127 aa9.14□□□□□ -0.95
CASC4-201ENST00000299957 BRK1Q8WUW1 75 aa9.14□□□□□ -0.95
CASC4-201ENST00000299957 A0A1B0GUV1 79 aa9.14□□□□□ -0.95
CASC4-201ENST00000299957 FSHBP01225 129 aa9.14□□□□□ -0.95
CASC4-201ENST00000299957 Q6ZRU5 148 aa9.14□□□□□ -0.95
CASC4-201ENST00000299957 RMI2Q96E14 147 aa9.14□□□□□ -0.95
CASC4-201ENST00000299957 LINC00575Q6W349 94 aa9.13□□□□□ -0.95
CASC4-201ENST00000299957 Q6ZVQ6 151 aa9.12□□□□□ -0.95
CASC4-201ENST00000299957 WFDC13Q8IUB5 93 aa9.12□□□□□ -0.95
CASC4-201ENST00000299957 SPATA3Q8NHX4 192 aa9.12□□□□□ -0.95
CASC4-201ENST00000299957 PKIGQ9Y2B9 76 aa9.12□□□□□ -0.95
CASC4-201ENST00000299957 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
CASC4-201ENST00000299957 PLAC8L1A1L4L8 177 aa9.11□□□□□ -0.95
CASC4-201ENST00000299957 NDUFS5O43920 106 aa9.11□□□□□ -0.95
CASC4-201ENST00000299957 COX17Q14061 63 aa9.11□□□□□ -0.95
CASC4-201ENST00000299957 CSMD2Q7Z408 3487 aa9.1□□□□□ -0.95
CASC4-201ENST00000299957 LYPD5Q6UWN5 251 aa9.1□□□□□ -0.95
CASC4-201ENST00000299957 SVIPQ8NHG7 77 aa9.1□□□□□ -0.95
CASC4-201ENST00000299957 TMEM258P61165 79 aa9.09□□□□□ -0.95
CASC4-201ENST00000299957 M0R378 163 aa9.09□□□□□ -0.95
CASC4-201ENST00000299957 LINC01547P58512 204 aaPredicted RBP9.09□□□□□ -0.95
CASC4-201ENST00000299957 PDE6GP18545 87 aa9.09□□□□□ -0.95
CASC4-201ENST00000299957 C5orf47Q569G3 176 aa9.09□□□□□ -0.95
CASC4-201ENST00000299957 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
CASC4-201ENST00000299957 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
CASC4-201ENST00000299957 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
CASC4-201ENST00000299957 MUC7Q8TAX7 377 aa9.07□□□□□ -0.96
CASC4-201ENST00000299957 H0Y9J4 135 aa9.06□□□□□ -0.96
CASC4-201ENST00000299957 LINC01561Q8N1V8 128 aa9.06□□□□□ -0.96
CASC4-201ENST00000299957 C19orf73Q9NVV2 129 aa9.05□□□□□ -0.96
CASC4-201ENST00000299957 TRAV10A0A0B4J240 114 aa9.05□□□□□ -0.96
CASC4-201ENST00000299957 UBE2AP49459 152 aa9.05□□□□□ -0.96
CASC4-201ENST00000299957 M0R2N4 97 aa9.04□□□□□ -0.96
CASC4-201ENST00000299957 C16orf95Q9H693 158 aa9.04□□□□□ -0.96
CASC4-201ENST00000299957 CDK2AP2O75956 126 aa9.04□□□□□ -0.96
CASC4-201ENST00000299957 NDUFC2O95298 119 aa9.04□□□□□ -0.96
CASC4-201ENST00000299957 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
CASC4-201ENST00000299957 STAB2Q8WWQ8 2551 aa9.02□□□□□ -0.96
CASC4-201ENST00000299957 ESRGQ1W209 222 aa9.02□□□□□ -0.97
CASC4-201ENST00000299957 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.97
CASC4-201ENST00000299957 NDUFC2-KCTD14E9PQ53 114 aa9.02□□□□□ -0.97
CASC4-201ENST00000299957 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
CASC4-201ENST00000299957 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
CASC4-201ENST00000299957 PDZD2O15018 2839 aa9.01□□□□□ -0.97
CASC4-201ENST00000299957 TRAV7A0A075B6U4 112 aa9□□□□□ -0.97
CASC4-201ENST00000299957 C1orf137Q5JT78 98 aa9□□□□□ -0.97
CASC4-201ENST00000299957 PRLHP81277 87 aa8.99□□□□□ -0.97
CASC4-201ENST00000299957 KIAA0087Q14695 138 aa8.99□□□□□ -0.97
CASC4-201ENST00000299957 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
CASC4-201ENST00000299957 KMT2BQ9UMN6 2715 aaPredicted RBP8.99□□□□□ -0.97
CASC4-201ENST00000299957 A0A0G2JQZ4 141 aa8.99□□□□□ -0.97
CASC4-201ENST00000299957 A0A1W2PNN7 141 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms