RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 A0A1B0GX51 115 aa16.49■□□□□ 0.23
SPTSSA-201ENST00000298130 UQCRQO14949 82 aa16.49■□□□□ 0.23
SPTSSA-201ENST00000298130 C2orf48Q96LS8 159 aa16.48■□□□□ 0.23
SPTSSA-201ENST00000298130 Q6JHZ5 121 aa16.47■□□□□ 0.23
SPTSSA-201ENST00000298130 LINC00167Q96N53 147 aa16.47■□□□□ 0.23
SPTSSA-201ENST00000298130 TMEM256-PLSCR3K7ERE1 68 aa16.46■□□□□ 0.23
SPTSSA-201ENST00000298130 ENHOQ6UWT2 76 aa16.46■□□□□ 0.23
SPTSSA-201ENST00000298130 hADV29S1A0JD25 119 aa16.45■□□□□ 0.22
SPTSSA-201ENST00000298130 COX7CP15954 63 aa16.45■□□□□ 0.22
SPTSSA-201ENST00000298130 SPART-AS1P0CW21 52 aa16.45■□□□□ 0.22
SPTSSA-201ENST00000298130 M0R2N4 97 aa16.44■□□□□ 0.22
SPTSSA-201ENST00000298130 IGHV4-30-4P0DP06 118 aa16.43■□□□□ 0.22
SPTSSA-201ENST00000298130 LINC00575Q6W349 94 aa16.43■□□□□ 0.22
SPTSSA-201ENST00000298130 HIGD2BQ4VC39 106 aa16.43■□□□□ 0.22
SPTSSA-201ENST00000298130 LELP1Q5T871 98 aa16.43■□□□□ 0.22
SPTSSA-201ENST00000298130 RETNQ9HD89 108 aa16.43■□□□□ 0.22
SPTSSA-201ENST00000298130 FAM19A1Q7Z5A9 133 aa16.42■□□□□ 0.22
SPTSSA-201ENST00000298130 JMJD7-PLA2G4BH0Y9G9 81 aa16.42■□□□□ 0.22
SPTSSA-201ENST00000298130 ATOX1O00244 68 aa16.41■□□□□ 0.22
SPTSSA-201ENST00000298130 LAMTOR3Q9UHA4 124 aa16.41■□□□□ 0.22
SPTSSA-201ENST00000298130 MIFP14174 115 aa16.4■□□□□ 0.22
SPTSSA-201ENST00000298130 C6orf48Q9UBA6 75 aa16.4■□□□□ 0.22
SPTSSA-201ENST00000298130 USP17L23D6RBM5 183 aa16.39■□□□□ 0.21
SPTSSA-201ENST00000298130 TRBV10-3A0A0K0K1G6 114 aa16.39■□□□□ 0.21
SPTSSA-201ENST00000298130 Q6ZQY7 126 aa16.38■□□□□ 0.21
SPTSSA-201ENST00000298130 WFDC10BQ8IUB3 73 aa16.38■□□□□ 0.21
SPTSSA-201ENST00000298130 LYPD5Q6UWN5 251 aa16.38■□□□□ 0.21
SPTSSA-201ENST00000298130 TRAV23DV6A0A075B6W5 121 aa16.37■□□□□ 0.21
SPTSSA-201ENST00000298130 KMT2BQ9UMN6 2715 aaPredicted RBP16.36■□□□□ 0.21
SPTSSA-201ENST00000298130 PRR34Q9NV39 138 aa16.36■□□□□ 0.21
SPTSSA-201ENST00000298130 LOC107984640A0A0U1RRK4 108 aa16.35■□□□□ 0.21
SPTSSA-201ENST00000298130 A0A0J9YWU9 116 aa16.34■□□□□ 0.21
SPTSSA-201ENST00000298130 TENM3Q9P273 2699 aa16.34■□□□□ 0.21
SPTSSA-201ENST00000298130 RBM3P98179 157 aaKnown RBP16.33■□□□□ 0.21
SPTSSA-201ENST00000298130 IGLV6-57P01721 117 aa16.33■□□□□ 0.2
SPTSSA-201ENST00000298130 OXLD1Q5BKU9 147 aa16.32■□□□□ 0.2
SPTSSA-201ENST00000298130 ANK2Q01484 3957 aa16.3■□□□□ 0.2
SPTSSA-201ENST00000298130 Q6ZQT0 140 aa16.29■□□□□ 0.2
SPTSSA-201ENST00000298130 UBL5Q9BZL1 73 aa16.28■□□□□ 0.2
SPTSSA-201ENST00000298130 CRYGAP11844 174 aa16.28■□□□□ 0.2
SPTSSA-201ENST00000298130 SERP2Q8N6R1 65 aa16.28■□□□□ 0.2
SPTSSA-201ENST00000298130 CAMK2N2Q96S95 79 aa16.27■□□□□ 0.2
SPTSSA-201ENST00000298130 ZNF561-AS1K7EIQ3 104 aa16.27■□□□□ 0.2
SPTSSA-201ENST00000298130 KPRPQ5T749 579 aaPredicted RBP16.26■□□□□ 0.19
SPTSSA-201ENST00000298130 Q6ZTC4 211 aa16.26■□□□□ 0.19
SPTSSA-201ENST00000298130 SVIPQ8NHG7 77 aa16.26■□□□□ 0.19
SPTSSA-201ENST00000298130 GHRHP01286 108 aa16.25■□□□□ 0.19
SPTSSA-201ENST00000298130 HAMPP81172 84 aa16.25■□□□□ 0.19
SPTSSA-201ENST00000298130 Q6ZRU5 148 aa16.24■□□□□ 0.19
SPTSSA-201ENST00000298130 UPK3BQ9BT76 320 aa16.24■□□□□ 0.19
SPTSSA-201ENST00000298130 DIRC1Q969H9 104 aa16.23■□□□□ 0.19
SPTSSA-201ENST00000298130 ZNF73O43830 326 aaPredicted RBP16.23■□□□□ 0.19
SPTSSA-201ENST00000298130 DSCR8Q96T75 97 aa16.21■□□□□ 0.19
SPTSSA-201ENST00000298130 STAB1Q9NY15 2570 aa16.21■□□□□ 0.19
SPTSSA-201ENST00000298130 SCXQ7RTU7 201 aa16.21■□□□□ 0.18
SPTSSA-201ENST00000298130 GVQW2A0A096LPI5 108 aaPredicted RBP16.18■□□□□ 0.18
SPTSSA-201ENST00000298130 COX7BP24311 80 aa16.18■□□□□ 0.18
SPTSSA-201ENST00000298130 KRTAP10-11P60412 298 aa16.17■□□□□ 0.18
SPTSSA-201ENST00000298130 ESRGQ1W209 222 aa16.17■□□□□ 0.18
SPTSSA-201ENST00000298130 MAST4O15021 2626 aa16.17■□□□□ 0.18
SPTSSA-201ENST00000298130 FLNBO75369 2602 aaKnown RBP16.17■□□□□ 0.18
SPTSSA-201ENST00000298130 NOTCH1P46531 2555 aa16.17■□□□□ 0.18
SPTSSA-201ENST00000298130 VPREB1P12018 145 aa16.16■□□□□ 0.18
SPTSSA-201ENST00000298130 Q6ZVQ6 151 aa16.16■□□□□ 0.18
SPTSSA-201ENST00000298130 C15orf56Q8N910 161 aa16.16■□□□□ 0.18
SPTSSA-201ENST00000298130 LINC01547P58512 204 aaPredicted RBP16.15■□□□□ 0.18
SPTSSA-201ENST00000298130 KRTAP26-1Q6PEX3 210 aa16.15■□□□□ 0.18
SPTSSA-201ENST00000298130 LOC110117498A0A087WWA1 95 aa16.14■□□□□ 0.17
SPTSSA-201ENST00000298130 IGKV2D-24A0A075B6R9 120 aa16.14■□□□□ 0.17
SPTSSA-201ENST00000298130 F8P00451 2351 aa16.13■□□□□ 0.17
SPTSSA-201ENST00000298130 MUC7Q8TAX7 377 aa16.13■□□□□ 0.17
SPTSSA-201ENST00000298130 ATP5EP2Q5VTU8 51 aa16.13■□□□□ 0.17
SPTSSA-201ENST00000298130 Q6ZRP5 223 aa16.12■□□□□ 0.17
SPTSSA-201ENST00000298130 ELOF1P60002 83 aaKnown RBP16.11■□□□□ 0.17
SPTSSA-201ENST00000298130 C20orf197Q8N268 126 aa16.1■□□□□ 0.17
SPTSSA-201ENST00000298130 TRAV10A0A0B4J240 114 aa16.09■□□□□ 0.17
SPTSSA-201ENST00000298130 FBN1P35555 2871 aaKnown RBP16.09■□□□□ 0.17
SPTSSA-201ENST00000298130 C1orf43Q9BWL3 253 aa16.07■□□□□ 0.16
SPTSSA-201ENST00000298130 EGFEM1PQ0D2K5 195 aa16.06■□□□□ 0.16
SPTSSA-201ENST00000298130 NDUFC2-KCTD14E9PQ53 114 aa16.06■□□□□ 0.16
SPTSSA-201ENST00000298130 J3KT08 172 aa16.05■□□□□ 0.16
SPTSSA-201ENST00000298130 M0R378 163 aa16.05■□□□□ 0.16
SPTSSA-201ENST00000298130 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.05■□□□□ 0.16
SPTSSA-201ENST00000298130 DEFB105AQ8NG35 78 aa16.05■□□□□ 0.16
SPTSSA-201ENST00000298130 FAM19A5Q7Z5A7 132 aaPredicted RBP16.04■□□□□ 0.16
SPTSSA-201ENST00000298130 TRBV7-4A0A0J9YYF1 115 aa16.02■□□□□ 0.16
SPTSSA-201ENST00000298130 DPH3Q96FX2 82 aa16.02■□□□□ 0.16
SPTSSA-201ENST00000298130 Q8N9L7 120 aa16.02■□□□□ 0.15
SPTSSA-201ENST00000298130 OXTP01178 125 aa16.01■□□□□ 0.15
SPTSSA-201ENST00000298130 DEFB131BA0A096LNP1 70 aa16.01■□□□□ 0.15
SPTSSA-201ENST00000298130 SERTAD4-AS1Q5TG53 156 aa16.01■□□□□ 0.15
SPTSSA-201ENST00000298130 LINC00528Q8N1L1 170 aa16.01■□□□□ 0.15
SPTSSA-201ENST00000298130 TMEM258P61165 79 aa16■□□□□ 0.15
SPTSSA-201ENST00000298130 WIPF1O43516 503 aa15.99■□□□□ 0.15
SPTSSA-201ENST00000298130 BAHCC1Q9P281 2608 aa15.99■□□□□ 0.15
SPTSSA-201ENST00000298130 PRB2P02812 416 aaPredicted RBP15.98■□□□□ 0.15
SPTSSA-201ENST00000298130 SNURFQ9Y675 71 aa15.98■□□□□ 0.15
SPTSSA-201ENST00000298130 RPL37AP8A6NKH3 93 aa15.97■□□□□ 0.15
SPTSSA-201ENST00000298130 SYCNQ0VAF6 134 aa15.97■□□□□ 0.15
SPTSSA-201ENST00000298130 CASC10Q5T4H9 136 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms