RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 FHL2Q14192 279 aa7.98□□□□□ -1.13
NPC1L1-201ENST00000289547 SMCR5Q8TEV8 140 aa7.98□□□□□ -1.13
NPC1L1-201ENST00000289547 IGLV5-39A0A0G2JS06 123 aa7.97□□□□□ -1.13
NPC1L1-201ENST00000289547 CXCL6P80162 114 aa7.96□□□□□ -1.13
NPC1L1-201ENST00000289547 TNRC18O15417 2968 aaPredicted RBP7.96□□□□□ -1.14
NPC1L1-201ENST00000289547 BRCA2P51587 3418 aa7.96□□□□□ -1.14
NPC1L1-201ENST00000289547 C1orf137Q5JT78 98 aa7.96□□□□□ -1.14
NPC1L1-201ENST00000289547 CASC2Q6XLA1 102 aa7.95□□□□□ -1.14
NPC1L1-201ENST00000289547 RPL37AP8A6NKH3 93 aa7.95□□□□□ -1.14
NPC1L1-201ENST00000289547 BCE1O60756 84 aa7.95□□□□□ -1.14
NPC1L1-201ENST00000289547 C1orf134Q5TEV5 83 aa7.95□□□□□ -1.14
NPC1L1-201ENST00000289547 C7orf33Q8WU49 177 aa7.94□□□□□ -1.14
NPC1L1-201ENST00000289547 MDFIQ99750 246 aa7.94□□□□□ -1.14
NPC1L1-201ENST00000289547 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.92□□□□□ -1.14
NPC1L1-201ENST00000289547 LINC00336Q6ZUF6 198 aa7.92□□□□□ -1.14
NPC1L1-201ENST00000289547 KRTAP10-3P60369 221 aa7.91□□□□□ -1.14
NPC1L1-201ENST00000289547 MUC4Q99102 2169 aa7.91□□□□□ -1.14
NPC1L1-201ENST00000289547 PLAC8L1A1L4L8 177 aa7.9□□□□□ -1.14
NPC1L1-201ENST00000289547 TM2D3Q9BRN9 247 aa7.9□□□□□ -1.14
NPC1L1-201ENST00000289547 LITAFQ99732 161 aa7.9□□□□□ -1.14
NPC1L1-201ENST00000289547 K7EIL1 84 aa7.9□□□□□ -1.15
NPC1L1-201ENST00000289547 LINC01561Q8N1V8 128 aa7.9□□□□□ -1.15
NPC1L1-201ENST00000289547 Q9UF83 564 aa7.9□□□□□ -1.15
NPC1L1-201ENST00000289547 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
NPC1L1-201ENST00000289547 LINC00474Q9P2X8 69 aa7.89□□□□□ -1.15
NPC1L1-201ENST00000289547 C6orf223Q8N319 242 aa7.88□□□□□ -1.15
NPC1L1-201ENST00000289547 SMIM29Q86T20 159 aa7.88□□□□□ -1.15
NPC1L1-201ENST00000289547 IGLV5-45A0A087WSX0 123 aa7.88□□□□□ -1.15
NPC1L1-201ENST00000289547 DEFB116Q30KQ4 102 aa7.88□□□□□ -1.15
NPC1L1-201ENST00000289547 LIMD2Q9BT23 127 aa7.88□□□□□ -1.15
NPC1L1-201ENST00000289547 XIRP2A4UGR9 3374 aa7.87□□□□□ -1.15
NPC1L1-201ENST00000289547 H0Y9P7 68 aa7.87□□□□□ -1.15
NPC1L1-201ENST00000289547 EGFEM1PQ0D2K5 195 aa7.87□□□□□ -1.15
NPC1L1-201ENST00000289547 H3BNG1 76 aa7.87□□□□□ -1.15
NPC1L1-201ENST00000289547 IGHV3OR16-9A0A0B4J2B5 98 aa7.87□□□□□ -1.15
NPC1L1-201ENST00000289547 K7ERS5 55 aa7.87□□□□□ -1.15
NPC1L1-201ENST00000289547 KRTAP10-11P60412 298 aa7.87□□□□□ -1.15
NPC1L1-201ENST00000289547 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
NPC1L1-201ENST00000289547 SPINK6Q6UWN8 80 aa7.86□□□□□ -1.15
NPC1L1-201ENST00000289547 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
NPC1L1-201ENST00000289547 C10orf25Q5T742 122 aa7.86□□□□□ -1.15
NPC1L1-201ENST00000289547 hDV103S1A0JD37 113 aa7.86□□□□□ -1.15
NPC1L1-201ENST00000289547 X6R8D5 127 aa7.86□□□□□ -1.15
NPC1L1-201ENST00000289547 IGLV5-52A0A0A0MRZ9 124 aa7.85□□□□□ -1.15
NPC1L1-201ENST00000289547 HCG22E2RYF7 251 aa7.85□□□□□ -1.15
NPC1L1-201ENST00000289547 Q6ZQT0 140 aa7.85□□□□□ -1.15
NPC1L1-201ENST00000289547 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
NPC1L1-201ENST00000289547 C19orf73Q9NVV2 129 aa7.84□□□□□ -1.15
NPC1L1-201ENST00000289547 A0A087WSZ3 146 aa7.84□□□□□ -1.15
NPC1L1-201ENST00000289547 UNC80Q8N2C7 3258 aa7.83□□□□□ -1.16
NPC1L1-201ENST00000289547 CFAP54Q96N23 3096 aa7.83□□□□□ -1.16
NPC1L1-201ENST00000289547 C11orf72Q8NBR9 251 aa7.83□□□□□ -1.16
NPC1L1-201ENST00000289547 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
NPC1L1-201ENST00000289547 Q8NAQ8 132 aa7.82□□□□□ -1.16
NPC1L1-201ENST00000289547 CFAP46Q8IYW2 2715 aa7.82□□□□□ -1.16
NPC1L1-201ENST00000289547 PRUNE2Q8WUY3 3088 aa7.81□□□□□ -1.16
NPC1L1-201ENST00000289547 C1orf64Q8NEQ6 169 aa7.8□□□□□ -1.16
NPC1L1-201ENST00000289547 F8WDY8 70 aa7.79□□□□□ -1.16
NPC1L1-201ENST00000289547 LOC110117498A0A087WWA1 95 aa7.79□□□□□ -1.16
NPC1L1-201ENST00000289547 BAHCC1Q9P281 2608 aa7.78□□□□□ -1.16
NPC1L1-201ENST00000289547 IGLV9-49A0A0B4J1Y8 123 aa7.78□□□□□ -1.16
NPC1L1-201ENST00000289547 H7BZZ5 65 aa7.78□□□□□ -1.16
NPC1L1-201ENST00000289547 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
NPC1L1-201ENST00000289547 A8MUN3 132 aa7.77□□□□□ -1.16
NPC1L1-201ENST00000289547 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.16
NPC1L1-201ENST00000289547 KIAA0087Q14695 138 aa7.77□□□□□ -1.17
NPC1L1-201ENST00000289547 FLNAP21333 2647 aaKnown RBP7.77□□□□□ -1.17
NPC1L1-201ENST00000289547 ITPR3Q14573 2671 aa7.77□□□□□ -1.17
NPC1L1-201ENST00000289547 AKAP13Q12802 2813 aa7.76□□□□□ -1.17
NPC1L1-201ENST00000289547 SERTAD4-AS1Q5TG53 156 aa7.76□□□□□ -1.17
NPC1L1-201ENST00000289547 IGSF10Q6WRI0 2623 aa7.76□□□□□ -1.17
NPC1L1-201ENST00000289547 WIPF1O43516 503 aa7.76□□□□□ -1.17
NPC1L1-201ENST00000289547 IGHV6-1A0A0B4J1U7 121 aa7.74□□□□□ -1.17
NPC1L1-201ENST00000289547 C2orf48Q96LS8 159 aa7.74□□□□□ -1.17
NPC1L1-201ENST00000289547 SPAG11AQ6PDA7 123 aa7.74□□□□□ -1.17
NPC1L1-201ENST00000289547 DNAH14Q0VDD8 3507 aa7.74□□□□□ -1.17
NPC1L1-201ENST00000289547 NBDYA0A0U1RRE5 68 aa7.74□□□□□ -1.17
NPC1L1-201ENST00000289547 REG3GQ6UW15 175 aa7.74□□□□□ -1.17
NPC1L1-201ENST00000289547 Q6ZRU5 148 aa7.73□□□□□ -1.17
NPC1L1-201ENST00000289547 ZNF706Q9Y5V0 76 aaPredicted RBP7.73□□□□□ -1.17
NPC1L1-201ENST00000289547 CR1P17927 2039 aa7.73□□□□□ -1.17
NPC1L1-201ENST00000289547 Q9BRP9 147 aa7.73□□□□□ -1.17
NPC1L1-201ENST00000289547 CD164Q04900 197 aa7.72□□□□□ -1.17
NPC1L1-201ENST00000289547 ERC2-IT1O76042 136 aa7.71□□□□□ -1.18
NPC1L1-201ENST00000289547 CDH23Q9H251 3354 aa7.71□□□□□ -1.18
NPC1L1-201ENST00000289547 CSNK1G2-AS1Q8NCQ2 148 aa7.7□□□□□ -1.18
NPC1L1-201ENST00000289547 C9orf129Q5T035 196 aaKnown RBP7.69□□□□□ -1.18
NPC1L1-201ENST00000289547 ELOF1P60002 83 aaKnown RBP7.69□□□□□ -1.18
NPC1L1-201ENST00000289547 LINC00588Q9Y4M8 146 aa7.68□□□□□ -1.18
NPC1L1-201ENST00000289547 Q8NBF4 154 aa7.67□□□□□ -1.18
NPC1L1-201ENST00000289547 C6orf48Q9UBA6 75 aa7.67□□□□□ -1.18
NPC1L1-201ENST00000289547 KRTAP21-3Q3LHN1 58 aa7.67□□□□□ -1.18
NPC1L1-201ENST00000289547 PRLHP81277 87 aa7.66□□□□□ -1.18
NPC1L1-201ENST00000289547 MGAQ8IWI9 3026 aa7.66□□□□□ -1.18
NPC1L1-201ENST00000289547 A0A1B0GW54 56 aa7.66□□□□□ -1.18
NPC1L1-201ENST00000289547 SPINK1P00995 79 aa7.65□□□□□ -1.18
NPC1L1-201ENST00000289547 TRAV22A0A0B4J277 110 aa7.65□□□□□ -1.19
NPC1L1-201ENST00000289547 SZT2Q5T011 3432 aa7.65□□□□□ -1.19
NPC1L1-201ENST00000289547 C16orf90A8MZG2 172 aa7.64□□□□□ -1.19
NPC1L1-201ENST00000289547 RETNLBQ9BQ08 111 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms