RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PRO0628Q9UI54 55 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 FAM236AA0A1B0GUQ0 79 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 FAM236BA0A1B0GV22 79 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 H3BT86 120 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 POM121L12Q8N7R1 296 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 LINC01006Q8NI28 216 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 IGLV5-39A0A0G2JS06 123 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 TRACP01848 142 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 SLPIP03973 132 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 SPAG11BQ08648 103 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 C14orf132Q9NPU4 83 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 PYGO1Q9Y3Y4 419 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 LYRM9A8MSI8 78 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 KRTAP19-1Q8IUB9 90 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 SPANXCQ9NY87 97 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 TRBV6-8A0A0A6YYG3 113 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 A0A1B0GX51 115 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 hADV29S1A0JD25 119 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 NDUFA1O15239 70 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 CRIP2P52943 208 aaPredicted RBP2.03□□□□□ -2.08
HERC4-201ENST00000277817 REG3AQ06141 175 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 HIGD2BQ4VC39 106 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 UBE2D4Q9Y2X8 147 aa2.03□□□□□ -2.08
HERC4-201ENST00000277817 RBMY1FQ15415 496 aaKnown RBP2.03□□□□□ -2.09
HERC4-201ENST00000277817 LINC00526Q96FQ7 95 aa2.03□□□□□ -2.09
HERC4-201ENST00000277817 FREM2Q5SZK8 3169 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 IGLV2-18A0A075B6J9 118 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 TRBV30A0A0K0K1B3 111 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 TRBV6-4A0A1B0GX49 114 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 CCL18P55774 89 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 UBE2BP63146 152 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 SMIM20Q8N5G0 67 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 SMR3AQ99954 134 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 AGRNO00468 2067 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 IGLV4-69A0A075B6H9 119 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 ETDCA0A1B0GVM5 59 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 TSPEAR-AS2P59090 65 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 RBM3P98179 157 aaKnown RBP2.02□□□□□ -2.09
HERC4-201ENST00000277817 KPRPQ5T749 579 aaPredicted RBP2.02□□□□□ -2.09
HERC4-201ENST00000277817 RMI2Q96E14 147 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 XAGE1AQ9HD64 81 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 DSPP15924 2871 aaKnown RBP2.02□□□□□ -2.09
HERC4-201ENST00000277817 JMJD7-PLA2G4BH0Y9G9 81 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
HERC4-201ENST00000277817 MRPS36P82909 103 aaKnown RBP2.02□□□□□ -2.09
HERC4-201ENST00000277817 A0A1B0GUV1 79 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 CXCL5P42830 114 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 UBE2D1P51668 147 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 NDUFV3P56181 108 aaKnown RBP2.01□□□□□ -2.09
HERC4-201ENST00000277817 COX6A2Q02221 97 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 ADAMTSL4-AS1Q5T5F5 129 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 SDIM1Q6ZPB5 146 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 CDC42SE2Q9NRR3 84 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 IBA57-AS1B1ANH7 110 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 LY6G6DO95868 133 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 LINC00694P0DN24 101 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 NREPQ16612 68 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 LINC00643Q86TS7 51 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 H7C423 109 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 FUSP35637 526 aaKnown RBP eCLIP2.01□□□□□ -2.09
HERC4-201ENST00000277817 UBE2D3P61077 147 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 UBE2D2P62837 147 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 DIRC1Q969H9 104 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 PLECQ15149 4684 aaKnown RBP2.01□□□□□ -2.09
HERC4-201ENST00000277817 TRAV23DV6A0A075B6W5 121 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 LINC00959A0A1B0GUT2 108 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 ATOX1O00244 68 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 KRTAP10-2P60368 255 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 C6orf99Q4VX62 202 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 CHCHD7Q9BUK0 85 aa2.01□□□□□ -2.09
HERC4-201ENST00000277817 KALRNO60229 2985 aa2□□□□□ -2.09
HERC4-201ENST00000277817 HSPG2P98160 4391 aa2□□□□□ -2.09
HERC4-201ENST00000277817 LST1O00453 97 aa2□□□□□ -2.09
HERC4-201ENST00000277817 TIMM17BO60830 172 aa2□□□□□ -2.09
HERC4-201ENST00000277817 KIF25-AS1Q9Y6Z4 181 aa2□□□□□ -2.09
HERC4-201ENST00000277817 COX7BP24311 80 aa2□□□□□ -2.09
HERC4-201ENST00000277817 KLK9Q2XQG4 91 aa2□□□□□ -2.09
HERC4-201ENST00000277817 SMIM11BQ8TCY0 68 aa2□□□□□ -2.09
HERC4-201ENST00000277817 IGLV4-60A0A075B6I1 120 aa2□□□□□ -2.09
HERC4-201ENST00000277817 DEFB131BA0A096LNP1 70 aa2□□□□□ -2.09
HERC4-201ENST00000277817 IGKV2-24A0A0C4DH68 120 aa2□□□□□ -2.09
HERC4-201ENST00000277817 SMIM1B2RUZ4 78 aa2□□□□□ -2.09
HERC4-201ENST00000277817 PRB2P02812 416 aaPredicted RBP2□□□□□ -2.09
HERC4-201ENST00000277817 PRAC1Q96KF2 57 aa2□□□□□ -2.09
HERC4-201ENST00000277817 NF1P21359 2839 aa2□□□□□ -2.09
HERC4-201ENST00000277817 MIFP14174 115 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 LINC00315P59091 139 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 C9orf116Q5BN46 136 aaPredicted RBP1.99□□□□□ -2.09
HERC4-201ENST00000277817 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 AMELXQ99217 191 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 LOC400499M0QZD8 3231 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 ENHOQ6UWT2 76 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 SCXQ7RTU7 201 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 DNAH11Q96DT5 4516 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 A0A096LNI7 61 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 IGLV1-51P01701 117 aa1.99□□□□□ -2.09
HERC4-201ENST00000277817 IGKV2-28A0A075B6P5 120 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms