RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 LINC00315P59091 139 aa7.94□□□□□ -1.14
USP6NL-201ENST00000277575 RPL28P46779 137 aaKnown RBP7.94□□□□□ -1.14
USP6NL-201ENST00000277575 ITPR3Q14573 2671 aa7.94□□□□□ -1.14
USP6NL-201ENST00000277575 FAM19A4Q96LR4 140 aa7.94□□□□□ -1.14
USP6NL-201ENST00000277575 NDUFC2-KCTD14E9PQ53 114 aa7.93□□□□□ -1.14
USP6NL-201ENST00000277575 CELA1Q9UNI1 258 aa7.93□□□□□ -1.14
USP6NL-201ENST00000277575 NTM-AS1Q6ZSK4 140 aa7.93□□□□□ -1.14
USP6NL-201ENST00000277575 IGLV9-49A0A0B4J1Y8 123 aa7.92□□□□□ -1.14
USP6NL-201ENST00000277575 FSHBP01225 129 aa7.92□□□□□ -1.14
USP6NL-201ENST00000277575 HRCT1Q6UXD1 115 aa7.91□□□□□ -1.14
USP6NL-201ENST00000277575 C2orf48Q96LS8 159 aa7.91□□□□□ -1.14
USP6NL-201ENST00000277575 UQCRQO14949 82 aa7.91□□□□□ -1.14
USP6NL-201ENST00000277575 KRTAP24-1Q3LI83 254 aa7.91□□□□□ -1.14
USP6NL-201ENST00000277575 COL27A1Q8IZC6 1860 aaPredicted RBP7.91□□□□□ -1.14
USP6NL-201ENST00000277575 Q8N814 137 aa7.9□□□□□ -1.14
USP6NL-201ENST00000277575 NHLRC4P0CG21 123 aaPredicted RBP7.9□□□□□ -1.15
USP6NL-201ENST00000277575 WFDC13Q8IUB5 93 aa7.9□□□□□ -1.15
USP6NL-201ENST00000277575 J3KT08 172 aa7.89□□□□□ -1.15
USP6NL-201ENST00000277575 IGHV3OR16-9A0A0B4J2B5 98 aa7.89□□□□□ -1.15
USP6NL-201ENST00000277575 NDUFC2O95298 119 aa7.89□□□□□ -1.15
USP6NL-201ENST00000277575 LINC01561Q8N1V8 128 aa7.89□□□□□ -1.15
USP6NL-201ENST00000277575 CELSR2Q9HCU4 2923 aa7.88□□□□□ -1.15
USP6NL-201ENST00000277575 IMUPQ9GZP8 106 aa7.88□□□□□ -1.15
USP6NL-201ENST00000277575 REG3GQ6UW15 175 aa7.88□□□□□ -1.15
USP6NL-201ENST00000277575 Q6ZRU5 148 aa7.88□□□□□ -1.15
USP6NL-201ENST00000277575 IGLV5-52A0A0A0MRZ9 124 aa7.88□□□□□ -1.15
USP6NL-201ENST00000277575 F8WDY8 70 aa7.88□□□□□ -1.15
USP6NL-201ENST00000277575 Q9UF83 564 aa7.88□□□□□ -1.15
USP6NL-201ENST00000277575 X6R8D5 127 aa7.87□□□□□ -1.15
USP6NL-201ENST00000277575 ITPR1Q14643 2758 aa7.87□□□□□ -1.15
USP6NL-201ENST00000277575 A0A087WYN8 130 aa7.87□□□□□ -1.15
USP6NL-201ENST00000277575 KLK9Q2XQG4 91 aa7.86□□□□□ -1.15
USP6NL-201ENST00000277575 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
USP6NL-201ENST00000277575 C1orf134Q5TEV5 83 aa7.86□□□□□ -1.15
USP6NL-201ENST00000277575 XGP55808 180 aa7.86□□□□□ -1.15
USP6NL-201ENST00000277575 IGLV5-39A0A0G2JS06 123 aa7.86□□□□□ -1.15
USP6NL-201ENST00000277575 ESRGQ1W209 222 aa7.86□□□□□ -1.15
USP6NL-201ENST00000277575 FAM19A3Q7Z5A8 133 aa7.86□□□□□ -1.15
USP6NL-201ENST00000277575 CASC2Q6XLA1 102 aa7.86□□□□□ -1.15
USP6NL-201ENST00000277575 C10orf25Q5T742 122 aa7.85□□□□□ -1.15
USP6NL-201ENST00000277575 MRPL55Q7Z7F7 128 aaKnown RBP7.85□□□□□ -1.15
USP6NL-201ENST00000277575 LINC01556Q5JQF7 62 aa7.84□□□□□ -1.15
USP6NL-201ENST00000277575 LINC00337Q8N6G1 96 aa7.84□□□□□ -1.15
USP6NL-201ENST00000277575 LINC01546A6NGU7 62 aa7.84□□□□□ -1.15
USP6NL-201ENST00000277575 SERP2Q8N6R1 65 aa7.84□□□□□ -1.16
USP6NL-201ENST00000277575 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
USP6NL-201ENST00000277575 A8MTW9 85 aa7.83□□□□□ -1.16
USP6NL-201ENST00000277575 C3orf22Q8N5N4 141 aa7.83□□□□□ -1.16
USP6NL-201ENST00000277575 SBSPONQ8IVN8 264 aa7.83□□□□□ -1.16
USP6NL-201ENST00000277575 Q6JHZ5 121 aa7.82□□□□□ -1.16
USP6NL-201ENST00000277575 SEC61GP60059 68 aa7.82□□□□□ -1.16
USP6NL-201ENST00000277575 FAM236DA0A1B0GTK5 79 aa7.81□□□□□ -1.16
USP6NL-201ENST00000277575 FAM236CP0DP71 79 aa7.81□□□□□ -1.16
USP6NL-201ENST00000277575 TEP1Q99973 2627 aaKnown RBP7.81□□□□□ -1.16
USP6NL-201ENST00000277575 PRYO14603 147 aa7.8□□□□□ -1.16
USP6NL-201ENST00000277575 SETXQ7Z333 2677 aaKnown RBP7.8□□□□□ -1.16
USP6NL-201ENST00000277575 H3BNG1 76 aa7.8□□□□□ -1.16
USP6NL-201ENST00000277575 LINC00575Q6W349 94 aa7.8□□□□□ -1.16
USP6NL-201ENST00000277575 CIRBP-AS1Q8TBR5 109 aa7.8□□□□□ -1.16
USP6NL-201ENST00000277575 MDFIQ99750 246 aa7.8□□□□□ -1.16
USP6NL-201ENST00000277575 CUBNO60494 3623 aa7.79□□□□□ -1.16
USP6NL-201ENST00000277575 SNURFQ9Y675 71 aa7.79□□□□□ -1.16
USP6NL-201ENST00000277575 UTP20O75691 2785 aaKnown RBP7.79□□□□□ -1.16
USP6NL-201ENST00000277575 Q8NAQ8 132 aa7.79□□□□□ -1.16
USP6NL-201ENST00000277575 Q9BRP9 147 aa7.79□□□□□ -1.16
USP6NL-201ENST00000277575 C22orf24Q9Y442 160 aa7.79□□□□□ -1.16
USP6NL-201ENST00000277575 IGLV5-45A0A087WSX0 123 aa7.78□□□□□ -1.16
USP6NL-201ENST00000277575 A0A096LNT2 108 aa7.78□□□□□ -1.16
USP6NL-201ENST00000277575 PRLHP81277 87 aa7.78□□□□□ -1.16
USP6NL-201ENST00000277575 A0A087WSZ3 146 aa7.77□□□□□ -1.17
USP6NL-201ENST00000277575 COX7CP15954 63 aa7.77□□□□□ -1.17
USP6NL-201ENST00000277575 NDUFC1O43677 76 aa7.76□□□□□ -1.17
USP6NL-201ENST00000277575 PRR4Q16378 134 aa7.76□□□□□ -1.17
USP6NL-201ENST00000277575 A0A087WVE0 104 aa7.76□□□□□ -1.17
USP6NL-201ENST00000277575 C6orf48Q9UBA6 75 aa7.75□□□□□ -1.17
USP6NL-201ENST00000277575 NBPF19A0A087WUL8 3843 aa7.75□□□□□ -1.17
USP6NL-201ENST00000277575 Q8N3U1 123 aa7.75□□□□□ -1.17
USP6NL-201ENST00000277575 Q8N9L7 120 aa7.75□□□□□ -1.17
USP6NL-201ENST00000277575 HRNRQ86YZ3 2850 aaPredicted RBP7.75□□□□□ -1.17
USP6NL-201ENST00000277575 FAM30AQ9NZY2 134 aa7.74□□□□□ -1.17
USP6NL-201ENST00000277575 MPLKIPQ8TAP9 179 aa7.74□□□□□ -1.17
USP6NL-201ENST00000277575 ZNF469Q96JG9 3925 aaPredicted RBP7.74□□□□□ -1.17
USP6NL-201ENST00000277575 Q6Q795 121 aa7.73□□□□□ -1.17
USP6NL-201ENST00000277575 MAP1AP78559 2803 aaPredicted RBP7.73□□□□□ -1.17
USP6NL-201ENST00000277575 SMCR5Q8TEV8 140 aa7.73□□□□□ -1.17
USP6NL-201ENST00000277575 LINC00167Q96N53 147 aa7.72□□□□□ -1.17
USP6NL-201ENST00000277575 STAB1Q9NY15 2570 aa7.72□□□□□ -1.17
USP6NL-201ENST00000277575 SOSTDC1Q6X4U4 206 aa7.72□□□□□ -1.17
USP6NL-201ENST00000277575 CCDC179H3BU77 68 aa7.71□□□□□ -1.17
USP6NL-201ENST00000277575 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.18
USP6NL-201ENST00000277575 IGHV6-1A0A0B4J1U7 121 aa7.71□□□□□ -1.18
USP6NL-201ENST00000277575 LINC00846Q9NV44 126 aa7.71□□□□□ -1.18
USP6NL-201ENST00000277575 LINC00588Q9Y4M8 146 aa7.7□□□□□ -1.18
USP6NL-201ENST00000277575 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
USP6NL-201ENST00000277575 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
USP6NL-201ENST00000277575 Q6ZVQ6 151 aa7.7□□□□□ -1.18
USP6NL-201ENST00000277575 BRK1Q8WUW1 75 aa7.7□□□□□ -1.18
USP6NL-201ENST00000277575 CHD6Q8TD26 2715 aa7.69□□□□□ -1.18
USP6NL-201ENST00000277575 ATP5EP56381 51 aaPredicted RBP7.69□□□□□ -1.18
USP6NL-201ENST00000277575 DEFB116Q30KQ4 102 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms