RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 JMJD7-PLA2G4BH0Y9G9 81 aa8.81□□□□□ -1
C9orf3-201ENST00000277198 SVIPQ8NHG7 77 aa8.81□□□□□ -1
C9orf3-201ENST00000277198 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
C9orf3-201ENST00000277198 MIFP14174 115 aa8.81□□□□□ -1
C9orf3-201ENST00000277198 C14orf132Q9NPU4 83 aa8.81□□□□□ -1
C9orf3-201ENST00000277198 TMEM256-PLSCR3K7ERE1 68 aa8.8□□□□□ -1
C9orf3-201ENST00000277198 ANGP03950 147 aaKnown RBP8.8□□□□□ -1
C9orf3-201ENST00000277198 NANOS2P60321 138 aaKnown RBP8.8□□□□□ -1
C9orf3-201ENST00000277198 DAD1P61803 113 aa8.8□□□□□ -1
C9orf3-201ENST00000277198 CLPSL2Q6UWE3 100 aa8.8□□□□□ -1
C9orf3-201ENST00000277198 A0A096LPF7 62 aa8.79□□□□□ -1
C9orf3-201ENST00000277198 Q6JHZ5 121 aa8.79□□□□□ -1
C9orf3-201ENST00000277198 Q8N814 137 aa8.79□□□□□ -1
C9orf3-201ENST00000277198 C9orf129Q5T035 196 aaKnown RBP8.79□□□□□ -1
C9orf3-201ENST00000277198 UQCRQO14949 82 aa8.78□□□□□ -1
C9orf3-201ENST00000277198 HIST1H4AP62805 103 aaKnown RBP8.78□□□□□ -1
C9orf3-201ENST00000277198 DEFB135Q30KP9 77 aa8.78□□□□□ -1
C9orf3-201ENST00000277198 LELP1Q5T871 98 aa8.78□□□□□ -1
C9orf3-201ENST00000277198 A0A0J9YWU9 116 aa8.77□□□□□ -1.01
C9orf3-201ENST00000277198 CCKP06307 115 aa8.77□□□□□ -1.01
C9orf3-201ENST00000277198 SPART-AS1P0CW21 52 aa8.77□□□□□ -1.01
C9orf3-201ENST00000277198 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
C9orf3-201ENST00000277198 Q8NAQ8 132 aa8.77□□□□□ -1.01
C9orf3-201ENST00000277198 KMT2CQ8NEZ4 4911 aaKnown RBP8.76□□□□□ -1.01
C9orf3-201ENST00000277198 DNAH7Q8WXX0 4024 aa8.76□□□□□ -1.01
C9orf3-201ENST00000277198 ATOX1O00244 68 aa8.76□□□□□ -1.01
C9orf3-201ENST00000277198 NCR3O14931 201 aa8.76□□□□□ -1.01
C9orf3-201ENST00000277198 C3orf22Q8N5N4 141 aa8.76□□□□□ -1.01
C9orf3-201ENST00000277198 RETNQ9HD89 108 aa8.76□□□□□ -1.01
C9orf3-201ENST00000277198 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
C9orf3-201ENST00000277198 SLPIP03973 132 aa8.75□□□□□ -1.01
C9orf3-201ENST00000277198 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
C9orf3-201ENST00000277198 IGLV10-54A0A075B6I4 117 aa8.74□□□□□ -1.01
C9orf3-201ENST00000277198 GVQW2A0A096LPI5 108 aaPredicted RBP8.74□□□□□ -1.01
C9orf3-201ENST00000277198 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
C9orf3-201ENST00000277198 H3BQ85 93 aa8.73□□□□□ -1.01
C9orf3-201ENST00000277198 PRR3P79522 188 aaKnown RBP8.73□□□□□ -1.01
C9orf3-201ENST00000277198 TM2D3Q9BRN9 247 aa8.73□□□□□ -1.01
C9orf3-201ENST00000277198 SPAG11BQ08648 103 aa8.73□□□□□ -1.01
C9orf3-201ENST00000277198 ATP5EP2Q5VTU8 51 aa8.73□□□□□ -1.01
C9orf3-201ENST00000277198 WWC2-AS2Q96NR7 200 aa8.73□□□□□ -1.01
C9orf3-201ENST00000277198 DEFB4AO15263 64 aa8.72□□□□□ -1.01
C9orf3-201ENST00000277198 COX7CP15954 63 aa8.72□□□□□ -1.01
C9orf3-201ENST00000277198 LINC00575Q6W349 94 aa8.72□□□□□ -1.01
C9orf3-201ENST00000277198 C6orf99Q4VX62 202 aa8.72□□□□□ -1.01
C9orf3-201ENST00000277198 CELA1Q9UNI1 258 aa8.72□□□□□ -1.01
C9orf3-201ENST00000277198 RPL18AQ02543 176 aaKnown RBP8.71□□□□□ -1.02
C9orf3-201ENST00000277198 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.02
C9orf3-201ENST00000277198 C9orf153Q5TBE3 101 aa8.71□□□□□ -1.02
C9orf3-201ENST00000277198 Q8N3U1 123 aa8.71□□□□□ -1.02
C9orf3-201ENST00000277198 CSMD3Q7Z407 3707 aa8.71□□□□□ -1.02
C9orf3-201ENST00000277198 IGLV6-57P01721 117 aa8.7□□□□□ -1.02
C9orf3-201ENST00000277198 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
C9orf3-201ENST00000277198 STARD9Q9P2P6 4700 aa8.69□□□□□ -1.02
C9orf3-201ENST00000277198 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
C9orf3-201ENST00000277198 hADV29S1A0JD25 119 aa8.68□□□□□ -1.02
C9orf3-201ENST00000277198 H3BNG1 76 aa8.68□□□□□ -1.02
C9orf3-201ENST00000277198 CRYGAP11844 174 aa8.68□□□□□ -1.02
C9orf3-201ENST00000277198 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
C9orf3-201ENST00000277198 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
C9orf3-201ENST00000277198 TRBV10-3A0A0K0K1G6 114 aa8.68□□□□□ -1.02
C9orf3-201ENST00000277198 Q8NDZ9 215 aa8.68□□□□□ -1.02
C9orf3-201ENST00000277198 KLK12Q9UKR0 248 aa8.68□□□□□ -1.02
C9orf3-201ENST00000277198 IGKV3D-7A0A0C4DH55 119 aa8.67□□□□□ -1.02
C9orf3-201ENST00000277198 ZNF561-AS1K7EIQ3 104 aa8.67□□□□□ -1.02
C9orf3-201ENST00000277198 GHRHP01286 108 aa8.67□□□□□ -1.02
C9orf3-201ENST00000277198 ENHOQ6UWT2 76 aa8.67□□□□□ -1.02
C9orf3-201ENST00000277198 LOC110117498A0A087WWA1 95 aa8.66□□□□□ -1.02
C9orf3-201ENST00000277198 C6orf223Q8N319 242 aa8.66□□□□□ -1.02
C9orf3-201ENST00000277198 PDE6GP18545 87 aa8.66□□□□□ -1.02
C9orf3-201ENST00000277198 RBM3P98179 157 aaKnown RBP8.66□□□□□ -1.02
C9orf3-201ENST00000277198 RYR3Q15413 4870 aa8.65□□□□□ -1.02
C9orf3-201ENST00000277198 UBL5Q9BZL1 73 aa8.65□□□□□ -1.02
C9orf3-201ENST00000277198 HTN3P15516 51 aa8.64□□□□□ -1.03
C9orf3-201ENST00000277198 SERP2Q8N6R1 65 aa8.64□□□□□ -1.03
C9orf3-201ENST00000277198 TRBV7-6A0A0J9YX20 115 aa8.64□□□□□ -1.03
C9orf3-201ENST00000277198 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
C9orf3-201ENST00000277198 USP17L23D6RBM5 183 aa8.63□□□□□ -1.03
C9orf3-201ENST00000277198 Q6ZQT0 140 aa8.63□□□□□ -1.03
C9orf3-201ENST00000277198 C6orf48Q9UBA6 75 aa8.63□□□□□ -1.03
C9orf3-201ENST00000277198 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
C9orf3-201ENST00000277198 TRAV23DV6A0A075B6W5 121 aa8.62□□□□□ -1.03
C9orf3-201ENST00000277198 CASC10Q5T4H9 136 aa8.62□□□□□ -1.03
C9orf3-201ENST00000277198 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
C9orf3-201ENST00000277198 F8WDY8 70 aa8.61□□□□□ -1.03
C9orf3-201ENST00000277198 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.61□□□□□ -1.03
C9orf3-201ENST00000277198 A0A087WVE0 104 aa8.6□□□□□ -1.03
C9orf3-201ENST00000277198 DSCR8Q96T75 97 aa8.6□□□□□ -1.03
C9orf3-201ENST00000277198 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
C9orf3-201ENST00000277198 LYSTQ99698 3801 aa8.59□□□□□ -1.03
C9orf3-201ENST00000277198 C3orf84H3BNL1 204 aa8.59□□□□□ -1.03
C9orf3-201ENST00000277198 ZNF73O43830 326 aaPredicted RBP8.59□□□□□ -1.03
C9orf3-201ENST00000277198 BCE1O60756 84 aa8.59□□□□□ -1.03
C9orf3-201ENST00000277198 Q6ZQY7 126 aa8.59□□□□□ -1.03
C9orf3-201ENST00000277198 DYNC2H1Q8NCM8 4307 aaKnown RBP8.58□□□□□ -1.04
C9orf3-201ENST00000277198 CAMK2N2Q96S95 79 aa8.58□□□□□ -1.04
C9orf3-201ENST00000277198 SACSQ9NZJ4 4579 aa8.58□□□□□ -1.04
C9orf3-201ENST00000277198 COX7BP24311 80 aa8.57□□□□□ -1.04
C9orf3-201ENST00000277198 ELOF1P60002 83 aaKnown RBP8.57□□□□□ -1.04
C9orf3-201ENST00000277198 KRTAP26-1Q6PEX3 210 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms