RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 UBE2V1Q13404 147 aa16.15■□□□□ 0.18
SSBP4-201ENST00000270061 UNQ6190/PRO20217Q6UXQ8 127 aa16.15■□□□□ 0.18
SSBP4-201ENST00000270061 A0A087WTM6 91 aa16.15■□□□□ 0.18
SSBP4-201ENST00000270061 ZNF561-AS1K7EIQ3 104 aa16.15■□□□□ 0.18
SSBP4-201ENST00000270061 F8WDY8 70 aa16.14■□□□□ 0.17
SSBP4-201ENST00000270061 PSCAO43653 123 aa16.14■□□□□ 0.17
SSBP4-201ENST00000270061 C10orf25Q5T742 122 aa16.14■□□□□ 0.17
SSBP4-201ENST00000270061 LOC107984156A0A0G2JMH3 177 aa16.13■□□□□ 0.17
SSBP4-201ENST00000270061 ARL17AQ8IVW1 177 aa16.13■□□□□ 0.17
SSBP4-201ENST00000270061 LINC00526Q96FQ7 95 aa16.13■□□□□ 0.17
SSBP4-201ENST00000270061 C2orf48Q96LS8 159 aa16.13■□□□□ 0.17
SSBP4-201ENST00000270061 HSPG2P98160 4391 aa16.13■□□□□ 0.17
SSBP4-201ENST00000270061 GAGE10A6NGK3 116 aa16.1■□□□□ 0.17
SSBP4-201ENST00000270061 CDK2AP2O75956 126 aa16.1■□□□□ 0.17
SSBP4-201ENST00000270061 GTF2H5Q6ZYL4 71 aa16.1■□□□□ 0.17
SSBP4-201ENST00000270061 K7EP34 96 aa16.1■□□□□ 0.17
SSBP4-201ENST00000270061 HIGD2BQ4VC39 106 aa16.1■□□□□ 0.17
SSBP4-201ENST00000270061 SND1-IT1Q9HBX3 110 aa16.1■□□□□ 0.17
SSBP4-201ENST00000270061 SPCS1Q9Y6A9 102 aa16.1■□□□□ 0.17
SSBP4-201ENST00000270061 APOBP04114 4563 aaKnown RBP16.09■□□□□ 0.17
SSBP4-201ENST00000270061 TRBV30A0A0K0K1B3 111 aa16.09■□□□□ 0.17
SSBP4-201ENST00000270061 C9orf116Q5BN46 136 aaPredicted RBP16.09■□□□□ 0.17
SSBP4-201ENST00000270061 FUSP35637 526 aaKnown RBP eCLIP16.08■□□□□ 0.162e-6■■■□□ 17
SSBP4-201ENST00000270061 CAMK2N2Q96S95 79 aa16.08■□□□□ 0.16
SSBP4-201ENST00000270061 C6orf48Q9UBA6 75 aa16.08■□□□□ 0.16
SSBP4-201ENST00000270061 LRCOL1A6NCL2 159 aa16.05■□□□□ 0.16
SSBP4-201ENST00000270061 LYRM7Q5U5X0 104 aa16.05■□□□□ 0.16
SSBP4-201ENST00000270061 RPL13AP40429 203 aaKnown RBP16.03■□□□□ 0.16
SSBP4-201ENST00000270061 TRAV13-2A0A0B4J235 113 aa16.03■□□□□ 0.16
SSBP4-201ENST00000270061 H7C2G1 150 aa16.03■□□□□ 0.16
SSBP4-201ENST00000270061 IGKV2-28A0A075B6P5 120 aa16.02■□□□□ 0.15
SSBP4-201ENST00000270061 IGKV2D-28P01615 120 aa16.02■□□□□ 0.15
SSBP4-201ENST00000270061 Q1RN00 199 aa16.02■□□□□ 0.15
SSBP4-201ENST00000270061 Q6ZRU5 148 aa16.02■□□□□ 0.15
SSBP4-201ENST00000270061 USP17L23D6RBM5 183 aa16.01■□□□□ 0.15
SSBP4-201ENST00000270061 PCLOQ9Y6V0 5065 aa16.01■□□□□ 0.15
SSBP4-201ENST00000270061 NDUFC2O95298 119 aa16■□□□□ 0.15
SSBP4-201ENST00000270061 PSMB2P49721 201 aa15.99■□□□□ 0.15
SSBP4-201ENST00000270061 SYCNQ0VAF6 134 aa15.98■□□□□ 0.15
SSBP4-201ENST00000270061 Q8N814 137 aa15.98■□□□□ 0.15
SSBP4-201ENST00000270061 LINC00337Q8N6G1 96 aa15.97■□□□□ 0.15
SSBP4-201ENST00000270061 TRBV20-1A0A075B6N2 111 aa15.96■□□□□ 0.15
SSBP4-201ENST00000270061 SCGB1C2P0DMR2 95 aa15.96■□□□□ 0.15
SSBP4-201ENST00000270061 RNF151Q2KHN1 245 aa15.96■□□□□ 0.15
SSBP4-201ENST00000270061 IGLV5-52A0A0A0MRZ9 124 aa15.95■□□□□ 0.14
SSBP4-201ENST00000270061 TRIAP1O43715 76 aa15.95■□□□□ 0.14
SSBP4-201ENST00000270061 NDUFC2-KCTD14E9PQ53 114 aa15.93■□□□□ 0.14
SSBP4-201ENST00000270061 COX6CP09669 75 aa15.92■□□□□ 0.14
SSBP4-201ENST00000270061 KRTAP10-1P60331 282 aa15.92■□□□□ 0.14
SSBP4-201ENST00000270061 WFDC2Q14508 124 aa15.92■□□□□ 0.14
SSBP4-201ENST00000270061 LECT2O14960 151 aa15.92■□□□□ 0.14
SSBP4-201ENST00000270061 CARD19Q96LW7 228 aa15.92■□□□□ 0.14
SSBP4-201ENST00000270061 TCL1BO95988 128 aa15.91■□□□□ 0.14
SSBP4-201ENST00000270061 SLPIP03973 132 aa15.91■□□□□ 0.14
SSBP4-201ENST00000270061 H3BMG7 143 aa15.9■□□□□ 0.14
SSBP4-201ENST00000270061 TLX1NBP0CAT3 122 aa15.9■□□□□ 0.14
SSBP4-201ENST00000270061 KRTAP17-1Q9BYP8 105 aa15.9■□□□□ 0.14
SSBP4-201ENST00000270061 ABCA13Q86UQ4 5058 aa15.9■□□□□ 0.14
SSBP4-201ENST00000270061 RPL28P46779 137 aaKnown RBP15.89■□□□□ 0.13
SSBP4-201ENST00000270061 KRTAP4-5Q9BYR2 181 aa15.88■□□□□ 0.13
SSBP4-201ENST00000270061 Q8N1X5 172 aa15.87■□□□□ 0.13
SSBP4-201ENST00000270061 Q8NDZ9 215 aa15.87■□□□□ 0.13
SSBP4-201ENST00000270061 XGP55808 180 aa15.85■□□□□ 0.13
SSBP4-201ENST00000270061 PRR3P79522 188 aaKnown RBP15.85■□□□□ 0.13
SSBP4-201ENST00000270061 Q6ZRP5 223 aa15.85■□□□□ 0.13
SSBP4-201ENST00000270061 OR13C6PQ8NH95 151 aa15.85■□□□□ 0.13
SSBP4-201ENST00000270061 XAGE1AQ9HD64 81 aa15.85■□□□□ 0.13
SSBP4-201ENST00000270061 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-201ENST00000270061 TRBV10-2A0A0K0K1G8 114 aa15.84■□□□□ 0.13
SSBP4-201ENST00000270061 F8W1H4 67 aa15.84■□□□□ 0.13
SSBP4-201ENST00000270061 TMEM126AQ9H061 195 aa15.84■□□□□ 0.13
SSBP4-201ENST00000270061 ATXN8Q156A1 80 aa15.83■□□□□ 0.12
SSBP4-201ENST00000270061 C14orf177Q52M58 125 aa15.83■□□□□ 0.12
SSBP4-201ENST00000270061 SMIM11BQ8TCY0 68 aa15.83■□□□□ 0.12
SSBP4-201ENST00000270061 PRO0461Q9UI25 63 aa15.82■□□□□ 0.12
SSBP4-201ENST00000270061 CNBPP62633 177 aaKnown RBP15.8■□□□□ 0.12
SSBP4-201ENST00000270061 GAGE2EQ4V326 116 aa15.8■□□□□ 0.12
SSBP4-201ENST00000270061 GAGE2DQ9UEU5 116 aa15.8■□□□□ 0.12
SSBP4-201ENST00000270061 NCR3O14931 201 aa15.8■□□□□ 0.12
SSBP4-201ENST00000270061 DNAH8Q96JB1 4490 aa15.8■□□□□ 0.12
SSBP4-201ENST00000270061 LST1O00453 97 aa15.78■□□□□ 0.12
SSBP4-201ENST00000270061 VPREB1P12018 145 aa15.78■□□□□ 0.12
SSBP4-201ENST00000270061 FAT1Q14517 4588 aa15.78■□□□□ 0.12
SSBP4-201ENST00000270061 CLEC2BQ92478 149 aa15.77■□□□□ 0.11
SSBP4-201ENST00000270061 S100A7L2Q5SY68 101 aa15.76■□□□□ 0.11
SSBP4-201ENST00000270061 C9orf129Q5T035 196 aaKnown RBP15.76■□□□□ 0.11
SSBP4-201ENST00000270061 IGLV6-57P01721 117 aa15.75■□□□□ 0.11
SSBP4-201ENST00000270061 RPL18AQ02543 176 aaKnown RBP15.75■□□□□ 0.11
SSBP4-201ENST00000270061 LINC01620Q4KN68 170 aa15.75■□□□□ 0.11
SSBP4-201ENST00000270061 PLA2G2DQ9UNK4 145 aa15.75■□□□□ 0.11
SSBP4-201ENST00000270061 LOC107984640A0A0U1RRK4 108 aa15.74■□□□□ 0.11
SSBP4-201ENST00000270061 H0YGX0 51 aa15.74■□□□□ 0.11
SSBP4-201ENST00000270061 EPM2AB3EWF7 344 aa15.73■□□□□ 0.11
SSBP4-201ENST00000270061 HAMPP81172 84 aa15.73■□□□□ 0.11
SSBP4-201ENST00000270061 FAM30AQ9NZY2 134 aa15.73■□□□□ 0.11
SSBP4-201ENST00000270061 M0R378 163 aa15.72■□□□□ 0.11
SSBP4-201ENST00000270061 SMCPP49901 116 aaPredicted RBP15.71■□□□□ 0.11
SSBP4-201ENST00000270061 MTURNQ8N3F0 131 aa15.7■□□□□ 0.1
SSBP4-201ENST00000270061 C9JAW5 83 aa15.7■□□□□ 0.1
SSBP4-201ENST00000270061 M0QXV9 152 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms