RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 MRPL55Q7Z7F7 128 aaKnown RBP11.82□□□□□ -0.52
SAMD1-201ENST00000269724 TSPEAR-AS2P59090 65 aa11.81□□□□□ -0.52
SAMD1-201ENST00000269724 KRTDAPP60985 99 aa11.81□□□□□ -0.52
SAMD1-201ENST00000269724 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
SAMD1-201ENST00000269724 DMBT1Q9UGM3 2413 aaPredicted RBP11.81□□□□□ -0.52
SAMD1-201ENST00000269724 LGALS3P17931 250 aaKnown RBP11.8□□□□□ -0.52
SAMD1-201ENST00000269724 AKR1D1P51857 326 aa11.8□□□□□ -0.52
SAMD1-201ENST00000269724 RPL24P83731 157 aaKnown RBP11.8□□□□□ -0.52
SAMD1-201ENST00000269724 SRSF9Q13242 221 aaKnown RBP eCLIP11.8□□□□□ -0.52
SAMD1-201ENST00000269724 MEIG1Q5JSS6 88 aa11.8□□□□□ -0.52
SAMD1-201ENST00000269724 C1orf137Q5JT78 98 aa11.8□□□□□ -0.52
SAMD1-201ENST00000269724 C20orf202A1L168 122 aa11.79□□□□□ -0.52
SAMD1-201ENST00000269724 S100A6P06703 90 aa11.79□□□□□ -0.52
SAMD1-201ENST00000269724 KRTAP11-1Q8IUC1 163 aa11.79□□□□□ -0.52
SAMD1-201ENST00000269724 NKAPP1Q8N9T2 125 aa11.79□□□□□ -0.52
SAMD1-201ENST00000269724 SMIM13P0DJ93 91 aa11.78□□□□□ -0.52
SAMD1-201ENST00000269724 HIST3H2BBQ8N257 126 aa11.78□□□□□ -0.52
SAMD1-201ENST00000269724 LRP1Q07954 4544 aaKnown RBP11.76□□□□□ -0.53
SAMD1-201ENST00000269724 IGLV7-43P04211 117 aa11.76□□□□□ -0.53
SAMD1-201ENST00000269724 VPREB1P12018 145 aa11.76□□□□□ -0.53
SAMD1-201ENST00000269724 S100A2P29034 98 aa11.76□□□□□ -0.53
SAMD1-201ENST00000269724 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
SAMD1-201ENST00000269724 MIR7-3HGQ8N6C7 128 aa11.75□□□□□ -0.53
SAMD1-201ENST00000269724 HIST1H2BLQ99880 126 aa11.75□□□□□ -0.53
SAMD1-201ENST00000269724 FAT3Q8TDW7 4589 aa11.75□□□□□ -0.53
SAMD1-201ENST00000269724 A0A0U1RRA0 63 aa11.74□□□□□ -0.53
SAMD1-201ENST00000269724 J3QL48 77 aa11.74□□□□□ -0.53
SAMD1-201ENST00000269724 REG3GQ6UW15 175 aa11.72□□□□□ -0.53
SAMD1-201ENST00000269724 LOC107984156A0A0G2JMH3 177 aa11.71□□□□□ -0.53
SAMD1-201ENST00000269724 ARL17AQ8IVW1 177 aa11.71□□□□□ -0.53
SAMD1-201ENST00000269724 RPL37AP8A6NKH3 93 aa11.7□□□□□ -0.54
SAMD1-201ENST00000269724 DIRC1Q969H9 104 aa11.7□□□□□ -0.54
SAMD1-201ENST00000269724 A0A0J9YXY3 114 aa11.69□□□□□ -0.54
SAMD1-201ENST00000269724 GAGE10A6NGK3 116 aa11.69□□□□□ -0.54
SAMD1-201ENST00000269724 BOD1L2Q8IYS8 172 aa11.69□□□□□ -0.54
SAMD1-201ENST00000269724 Q8NDZ9 215 aa11.69□□□□□ -0.54
SAMD1-201ENST00000269724 IGLV1-50A0A075B6I6 118 aa11.68□□□□□ -0.54
SAMD1-201ENST00000269724 IGKV2D-26A0A0A0MRZ7 120 aa11.68□□□□□ -0.54
SAMD1-201ENST00000269724 BCE1O60756 84 aa11.68□□□□□ -0.54
SAMD1-201ENST00000269724 SNRPEP62304 92 aaKnown RBP11.68□□□□□ -0.54
SAMD1-201ENST00000269724 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
SAMD1-201ENST00000269724 M0R378 163 aa11.67□□□□□ -0.54
SAMD1-201ENST00000269724 ZNF861PO60384 105 aa11.66□□□□□ -0.54
SAMD1-201ENST00000269724 TIMM17BO60830 172 aa11.66□□□□□ -0.54
SAMD1-201ENST00000269724 LINC01600Q96MT4 127 aa11.66□□□□□ -0.54
SAMD1-201ENST00000269724 ZNF815PA8K554 130 aa11.65□□□□□ -0.54
SAMD1-201ENST00000269724 H0Y9J4 135 aa11.65□□□□□ -0.54
SAMD1-201ENST00000269724 MIEN1Q9BRT3 115 aa11.65□□□□□ -0.54
SAMD1-201ENST00000269724 IGKV2-28A0A075B6P5 120 aa11.64□□□□□ -0.55
SAMD1-201ENST00000269724 IGKV2D-28P01615 120 aa11.64□□□□□ -0.55
SAMD1-201ENST00000269724 RPL28P46779 137 aaKnown RBP11.64□□□□□ -0.55
SAMD1-201ENST00000269724 DAND5Q8N907 189 aa11.64□□□□□ -0.55
SAMD1-201ENST00000269724 ATOH7Q8N100 152 aa11.63□□□□□ -0.55
SAMD1-201ENST00000269724 ANKRD39Q53RE8 183 aa11.62□□□□□ -0.55
SAMD1-201ENST00000269724 ADAMTSL4-AS1Q5T5F5 129 aa11.62□□□□□ -0.55
SAMD1-201ENST00000269724 NDUFC2O95298 119 aa11.61□□□□□ -0.55
SAMD1-201ENST00000269724 MT1HL1P0DM35 61 aa11.61□□□□□ -0.55
SAMD1-201ENST00000269724 LITAFQ99732 161 aa11.61□□□□□ -0.55
SAMD1-201ENST00000269724 HERC1Q15751 4861 aa11.6□□□□□ -0.55
SAMD1-201ENST00000269724 TRBV10-2A0A0K0K1G8 114 aa11.6□□□□□ -0.55
SAMD1-201ENST00000269724 TMEM126AQ9H061 195 aa11.6□□□□□ -0.55
SAMD1-201ENST00000269724 KRTAP13-1Q8IUC0 172 aa11.59□□□□□ -0.55
SAMD1-201ENST00000269724 SPANXB1Q9NS25 103 aaPredicted RBP11.59□□□□□ -0.55
SAMD1-201ENST00000269724 TTTY13Q9BZ97 58 aa11.58□□□□□ -0.56
SAMD1-201ENST00000269724 TNXBP22105 4242 aa11.57□□□□□ -0.56
SAMD1-201ENST00000269724 HSBP1L1C9JCN9 74 aa11.57□□□□□ -0.56
SAMD1-201ENST00000269724 TMEM238C9JI98 176 aa11.57□□□□□ -0.56
SAMD1-201ENST00000269724 NCR3O14931 201 aa11.57□□□□□ -0.56
SAMD1-201ENST00000269724 UBE2AP49459 152 aa11.57□□□□□ -0.56
SAMD1-201ENST00000269724 KCNQ1DNQ9H478 68 aa11.57□□□□□ -0.56
SAMD1-201ENST00000269724 PRYO14603 147 aa11.56□□□□□ -0.56
SAMD1-201ENST00000269724 SOSTDC1Q6X4U4 206 aa11.56□□□□□ -0.56
SAMD1-201ENST00000269724 SCGB1D4Q6XE38 83 aa11.56□□□□□ -0.56
SAMD1-201ENST00000269724 KRTAP10-8P60410 259 aa11.55□□□□□ -0.56
SAMD1-201ENST00000269724 S100A12P80511 92 aa11.55□□□□□ -0.56
SAMD1-201ENST00000269724 LINC00308Q8TCZ7 52 aa11.55□□□□□ -0.56
SAMD1-201ENST00000269724 SCGB1D1O95968 90 aa11.54□□□□□ -0.56
SAMD1-201ENST00000269724 TRBV10-3A0A0K0K1G6 114 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 EIF4EBP3O60516 100 aaPredicted RBP11.53□□□□□ -0.56
SAMD1-201ENST00000269724 KRTAP1-4P0C5Y4 121 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 SPRR1AP35321 89 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 Q6ZVH6 145 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 FAM19A1Q7Z5A9 133 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 PCP2Q8IVA1 136 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 COPS9Q8WXC6 57 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 SPANXDQ9BXN6 97 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 PPDPFQ9H3Y8 114 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 SPANXCQ9NY87 97 aa11.53□□□□□ -0.56
SAMD1-201ENST00000269724 NPC2P61916 151 aa11.52□□□□□ -0.57
SAMD1-201ENST00000269724 LINC00337Q8N6G1 96 aa11.52□□□□□ -0.57
SAMD1-201ENST00000269724 IGLV6-57P01721 117 aa11.51□□□□□ -0.57
SAMD1-201ENST00000269724 DDTP30046 118 aa11.51□□□□□ -0.57
SAMD1-201ENST00000269724 IFITM1P13164 125 aa11.5□□□□□ -0.57
SAMD1-201ENST00000269724 CBY1Q9Y3M2 126 aa11.5□□□□□ -0.57
SAMD1-201ENST00000269724 PRLHP81277 87 aa11.49□□□□□ -0.57
SAMD1-201ENST00000269724 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
SAMD1-201ENST00000269724 TMA7Q9Y2S6 64 aaKnown RBP11.49□□□□□ -0.57
SAMD1-201ENST00000269724 KRTAP4-16G5E9R7 235 aaPredicted RBP11.48□□□□□ -0.57
SAMD1-201ENST00000269724 RPL13AP40429 203 aaKnown RBP11.47□□□□□ -0.57
SAMD1-201ENST00000269724 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms