RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 Q8NDZ9 215 aa10.69□□□□□ -0.7
TPM1-201ENST00000267996 LECT2O14960 151 aa10.68□□□□□ -0.7
TPM1-201ENST00000267996 DNAH6Q9C0G6 4158 aa10.68□□□□□ -0.7
TPM1-201ENST00000267996 TLX1NBP0CAT3 122 aa10.67□□□□□ -0.7
TPM1-201ENST00000267996 Q6ZRN7 208 aaPredicted RBP10.67□□□□□ -0.7
TPM1-201ENST00000267996 TRBV20-1A0A075B6N2 111 aa10.66□□□□□ -0.7
TPM1-201ENST00000267996 PSCAO43653 123 aa10.66□□□□□ -0.7
TPM1-201ENST00000267996 SCGB1C2P0DMR2 95 aa10.66□□□□□ -0.7
TPM1-201ENST00000267996 TCL1BO95988 128 aa10.66□□□□□ -0.7
TPM1-201ENST00000267996 XAGE1AQ9HD64 81 aa10.66□□□□□ -0.7
TPM1-201ENST00000267996 RPL28P46779 137 aaKnown RBP10.65□□□□□ -0.7
TPM1-201ENST00000267996 PRR3P79522 188 aaKnown RBP10.65□□□□□ -0.7
TPM1-201ENST00000267996 Q6ZR54 194 aa10.65□□□□□ -0.7
TPM1-201ENST00000267996 Q6ZRP5 223 aa10.65□□□□□ -0.7
TPM1-201ENST00000267996 H3BMG7 143 aa10.64□□□□□ -0.71
TPM1-201ENST00000267996 COX6CP09669 75 aa10.64□□□□□ -0.71
TPM1-201ENST00000267996 C14orf177Q52M58 125 aa10.63□□□□□ -0.71
TPM1-201ENST00000267996 ALMS1Q8TCU4 4167 aa10.63□□□□□ -0.71
TPM1-201ENST00000267996 TRBV10-2A0A0K0K1G8 114 aa10.63□□□□□ -0.71
TPM1-201ENST00000267996 LRCOL1A6NCL2 159 aa10.63□□□□□ -0.71
TPM1-201ENST00000267996 CNBPP62633 177 aaKnown RBP10.63□□□□□ -0.71
TPM1-201ENST00000267996 SMIM11BQ8TCY0 68 aa10.62□□□□□ -0.71
TPM1-201ENST00000267996 M0R2N4 97 aa10.61□□□□□ -0.71
TPM1-201ENST00000267996 VPREB1P12018 145 aa10.61□□□□□ -0.71
TPM1-201ENST00000267996 GAGE2EQ4V326 116 aa10.61□□□□□ -0.71
TPM1-201ENST00000267996 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
TPM1-201ENST00000267996 GAGE2DQ9UEU5 116 aa10.61□□□□□ -0.71
TPM1-201ENST00000267996 C3orf84H3BNL1 204 aa10.6□□□□□ -0.71
TPM1-201ENST00000267996 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
TPM1-201ENST00000267996 NCR3O14931 201 aa10.6□□□□□ -0.71
TPM1-201ENST00000267996 C9orf129Q5T035 196 aaKnown RBP10.6□□□□□ -0.71
TPM1-201ENST00000267996 PRO0461Q9UI25 63 aa10.6□□□□□ -0.71
TPM1-201ENST00000267996 KMT2AQ03164 3969 aa10.59□□□□□ -0.71
TPM1-201ENST00000267996 ATXN8Q156A1 80 aa10.59□□□□□ -0.71
TPM1-201ENST00000267996 DNAH2Q9P225 4427 aa10.59□□□□□ -0.71
TPM1-201ENST00000267996 IGLV6-57P01721 117 aa10.58□□□□□ -0.72
TPM1-201ENST00000267996 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
TPM1-201ENST00000267996 LOC107984640A0A0U1RRK4 108 aa10.57□□□□□ -0.72
TPM1-201ENST00000267996 F8W1H4 67 aa10.57□□□□□ -0.72
TPM1-201ENST00000267996 LST1O00453 97 aa10.57□□□□□ -0.72
TPM1-201ENST00000267996 RPL18AQ02543 176 aaKnown RBP10.57□□□□□ -0.72
TPM1-201ENST00000267996 CLEC2BQ92478 149 aa10.57□□□□□ -0.72
TPM1-201ENST00000267996 PLA2G2DQ9UNK4 145 aa10.57□□□□□ -0.72
TPM1-201ENST00000267996 LY6G6CO95867 125 aa10.55□□□□□ -0.72
TPM1-201ENST00000267996 S100A7L2Q5SY68 101 aa10.55□□□□□ -0.72
TPM1-201ENST00000267996 M0R378 163 aa10.54□□□□□ -0.72
TPM1-201ENST00000267996 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
TPM1-201ENST00000267996 DNAH17Q9UFH2 4485 aa10.54□□□□□ -0.72
TPM1-201ENST00000267996 H0YGX0 51 aa10.53□□□□□ -0.72
TPM1-201ENST00000267996 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
TPM1-201ENST00000267996 IGLV5-37A0A075B6J1 123 aa10.52□□□□□ -0.73
TPM1-201ENST00000267996 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.52□□□□□ -0.73
TPM1-201ENST00000267996 TRBV10-3A0A0K0K1G6 114 aa10.52□□□□□ -0.73
TPM1-201ENST00000267996 GAGE2BQ13066 116 aa10.52□□□□□ -0.73
TPM1-201ENST00000267996 SERTAD4-AS1Q5TG53 156 aa10.52□□□□□ -0.73
TPM1-201ENST00000267996 MTURNQ8N3F0 131 aa10.52□□□□□ -0.73
TPM1-201ENST00000267996 FAM218AQ96MZ4 157 aa10.52□□□□□ -0.73
TPM1-201ENST00000267996 A0A087WTM6 91 aa10.51□□□□□ -0.73
TPM1-201ENST00000267996 Q8N814 137 aa10.51□□□□□ -0.73
TPM1-201ENST00000267996 LINC01600Q96MT4 127 aa10.51□□□□□ -0.73
TPM1-201ENST00000267996 C9JAW5 83 aa10.5□□□□□ -0.73
TPM1-201ENST00000267996 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
TPM1-201ENST00000267996 C9orf163Q8N9P6 203 aa10.5□□□□□ -0.73
TPM1-201ENST00000267996 C16orf90A8MZG2 172 aa10.5□□□□□ -0.73
TPM1-201ENST00000267996 M0QXV9 152 aa10.5□□□□□ -0.73
TPM1-201ENST00000267996 TRACP01848 142 aa10.5□□□□□ -0.73
TPM1-201ENST00000267996 KRTAP7-1Q8IUC3 87 aa10.5□□□□□ -0.73
TPM1-201ENST00000267996 SLC25A20O43772 301 aa10.48□□□□□ -0.73
TPM1-201ENST00000267996 C6orf99Q4VX62 202 aa10.48□□□□□ -0.73
TPM1-201ENST00000267996 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
TPM1-201ENST00000267996 A0A096LNI7 61 aa10.47□□□□□ -0.73
TPM1-201ENST00000267996 FAM168BA1KXE4 195 aa10.47□□□□□ -0.73
TPM1-201ENST00000267996 NKAPP1Q8N9T2 125 aa10.47□□□□□ -0.73
TPM1-201ENST00000267996 PKIGQ9Y2B9 76 aa10.47□□□□□ -0.73
TPM1-201ENST00000267996 A0A087WYN8 130 aa10.46□□□□□ -0.74
TPM1-201ENST00000267996 C7orf33Q8WU49 177 aa10.46□□□□□ -0.74
TPM1-201ENST00000267996 CBY1Q9Y3M2 126 aa10.46□□□□□ -0.74
TPM1-201ENST00000267996 H3BT86 120 aa10.44□□□□□ -0.74
TPM1-201ENST00000267996 SDIM1Q6ZPB5 146 aa10.44□□□□□ -0.74
TPM1-201ENST00000267996 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
TPM1-201ENST00000267996 A0A1B0GX51 115 aa10.44□□□□□ -0.74
TPM1-201ENST00000267996 ETDBQ3ZM63 59 aa10.44□□□□□ -0.74
TPM1-201ENST00000267996 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
TPM1-201ENST00000267996 TRBV7-6A0A0J9YX20 115 aa10.43□□□□□ -0.74
TPM1-201ENST00000267996 ZNF73O43830 326 aaPredicted RBP10.43□□□□□ -0.74
TPM1-201ENST00000267996 DIRC1Q969H9 104 aa10.43□□□□□ -0.74
TPM1-201ENST00000267996 KCNQ1DNQ9H478 68 aa10.43□□□□□ -0.74
TPM1-201ENST00000267996 SACSQ9NZJ4 4579 aa10.41□□□□□ -0.74
TPM1-201ENST00000267996 IGKV2-24A0A0C4DH68 120 aa10.41□□□□□ -0.74
TPM1-201ENST00000267996 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
TPM1-201ENST00000267996 LINC00167Q96N53 147 aa10.41□□□□□ -0.74
TPM1-201ENST00000267996 LINC00575Q6W349 94 aa10.41□□□□□ -0.74
TPM1-201ENST00000267996 MRPL55Q7Z7F7 128 aaKnown RBP10.41□□□□□ -0.74
TPM1-201ENST00000267996 TEN1Q86WV5 123 aa10.41□□□□□ -0.74
TPM1-201ENST00000267996 IGLV1-50A0A075B6I6 118 aa10.4□□□□□ -0.74
TPM1-201ENST00000267996 A0A1W2PNN7 141 aa10.4□□□□□ -0.74
TPM1-201ENST00000267996 FRAS1Q86XX4 4008 aa10.39□□□□□ -0.75
TPM1-201ENST00000267996 HECTD4Q9Y4D8 3996 aa10.39□□□□□ -0.75
TPM1-201ENST00000267996 OCIAD2Q56VL3 154 aa10.39□□□□□ -0.75
TPM1-201ENST00000267996 DNAL4O96015 105 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms