RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.8
FOXF1-201ENST00000262426 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
FOXF1-201ENST00000262426 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.81
FOXF1-201ENST00000262426 UPK3BQ9BT76 320 aa10.02□□□□□ -0.81
FOXF1-201ENST00000262426 LINC00474Q9P2X8 69 aa10.01□□□□□ -0.81
FOXF1-201ENST00000262426 LYRM9A8MSI8 78 aa10□□□□□ -0.81
FOXF1-201ENST00000262426 MIFP14174 115 aa10□□□□□ -0.81
FOXF1-201ENST00000262426 SPART-AS1P0CW21 52 aa9.99□□□□□ -0.81
FOXF1-201ENST00000262426 MPLKIPQ8TAP9 179 aa9.99□□□□□ -0.81
FOXF1-201ENST00000262426 DNHD1Q96M86 4753 aa9.98□□□□□ -0.81
FOXF1-201ENST00000262426 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
FOXF1-201ENST00000262426 CRPP02741 224 aa9.97□□□□□ -0.81
FOXF1-201ENST00000262426 EGFEM1PQ0D2K5 195 aa9.97□□□□□ -0.81
FOXF1-201ENST00000262426 COL7A1Q02388 2944 aa9.97□□□□□ -0.81
FOXF1-201ENST00000262426 S100A7L2Q5SY68 101 aa9.96□□□□□ -0.81
FOXF1-201ENST00000262426 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.81
FOXF1-201ENST00000262426 Q6ZTC4 211 aa9.96□□□□□ -0.81
FOXF1-201ENST00000262426 A0A0J9YWU9 116 aa9.96□□□□□ -0.82
FOXF1-201ENST00000262426 LINC00337Q8N6G1 96 aa9.95□□□□□ -0.82
FOXF1-201ENST00000262426 SS18Q15532 418 aa9.95□□□□□ -0.82
FOXF1-201ENST00000262426 RMI2Q96E14 147 aa9.95□□□□□ -0.82
FOXF1-201ENST00000262426 LINC00158P58513 81 aa9.95□□□□□ -0.82
FOXF1-201ENST00000262426 STAB2Q8WWQ8 2551 aa9.94□□□□□ -0.82
FOXF1-201ENST00000262426 NANOS2P60321 138 aaKnown RBP9.94□□□□□ -0.82
FOXF1-201ENST00000262426 PRO0628Q9UI54 55 aa9.94□□□□□ -0.82
FOXF1-201ENST00000262426 XCL1P47992 114 aa9.94□□□□□ -0.82
FOXF1-201ENST00000262426 RBM3P98179 157 aaKnown RBP9.94□□□□□ -0.82
FOXF1-201ENST00000262426 MIR7-3HGQ8N6C7 128 aa9.94□□□□□ -0.82
FOXF1-201ENST00000262426 SMIM11BQ8TCY0 68 aa9.94□□□□□ -0.82
FOXF1-201ENST00000262426 NDUFA1O15239 70 aa9.93□□□□□ -0.82
FOXF1-201ENST00000262426 DNAH3Q8TD57 4116 aa9.93□□□□□ -0.82
FOXF1-201ENST00000262426 SND1-IT1Q9HBX3 110 aa9.92□□□□□ -0.82
FOXF1-201ENST00000262426 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
FOXF1-201ENST00000262426 SMIM1B2RUZ4 78 aa9.91□□□□□ -0.82
FOXF1-201ENST00000262426 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
FOXF1-201ENST00000262426 ANGP03950 147 aaKnown RBP9.91□□□□□ -0.82
FOXF1-201ENST00000262426 HAMPP81172 84 aa9.91□□□□□ -0.82
FOXF1-201ENST00000262426 Q6JHZ5 121 aa9.91□□□□□ -0.82
FOXF1-201ENST00000262426 F8WEM9 126 aa9.89□□□□□ -0.83
FOXF1-201ENST00000262426 K7EIL1 84 aa9.89□□□□□ -0.83
FOXF1-201ENST00000262426 PRR3P79522 188 aaKnown RBP9.89□□□□□ -0.83
FOXF1-201ENST00000262426 SEC61GP60059 68 aa9.89□□□□□ -0.83
FOXF1-201ENST00000262426 TENM2Q9NT68 2774 aa9.89□□□□□ -0.83
FOXF1-201ENST00000262426 LINC00959A0A1B0GUT2 108 aa9.89□□□□□ -0.83
FOXF1-201ENST00000262426 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
FOXF1-201ENST00000262426 HUWE1Q7Z6Z7 4374 aaKnown RBP9.88□□□□□ -0.83
FOXF1-201ENST00000262426 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
FOXF1-201ENST00000262426 KPRPQ5T749 579 aaPredicted RBP9.87□□□□□ -0.83
FOXF1-201ENST00000262426 IGKV2-28A0A075B6P5 120 aa9.86□□□□□ -0.83
FOXF1-201ENST00000262426 IGKV2D-28P01615 120 aa9.86□□□□□ -0.83
FOXF1-201ENST00000262426 FP248Q71RG6 208 aaPredicted RBP9.86□□□□□ -0.83
FOXF1-201ENST00000262426 LYSTQ99698 3801 aa9.86□□□□□ -0.83
FOXF1-201ENST00000262426 C1orf195Q5TG92 126 aa9.86□□□□□ -0.83
FOXF1-201ENST00000262426 KLK12Q9UKR0 248 aa9.86□□□□□ -0.83
FOXF1-201ENST00000262426 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
FOXF1-201ENST00000262426 IGHV3OR16-9A0A0B4J2B5 98 aa9.85□□□□□ -0.83
FOXF1-201ENST00000262426 C11orf45Q8TAV5 145 aa9.85□□□□□ -0.83
FOXF1-201ENST00000262426 V9GYY9 64 aa9.85□□□□□ -0.83
FOXF1-201ENST00000262426 IGLV5-39A0A0G2JS06 123 aa9.84□□□□□ -0.83
FOXF1-201ENST00000262426 LYPD5Q6UWN5 251 aa9.84□□□□□ -0.83
FOXF1-201ENST00000262426 WFDC10BQ8IUB3 73 aa9.84□□□□□ -0.83
FOXF1-201ENST00000262426 DEFB131BA0A096LNP1 70 aa9.83□□□□□ -0.84
FOXF1-201ENST00000262426 H7BZZ5 65 aa9.83□□□□□ -0.84
FOXF1-201ENST00000262426 TIMM17BO60830 172 aa9.83□□□□□ -0.84
FOXF1-201ENST00000262426 REG3AQ06141 175 aa9.83□□□□□ -0.84
FOXF1-201ENST00000262426 TRAV13-2A0A0B4J235 113 aa9.82□□□□□ -0.84
FOXF1-201ENST00000262426 NDUFC2O95298 119 aa9.82□□□□□ -0.84
FOXF1-201ENST00000262426 ORMDL1Q9P0S3 153 aa9.82□□□□□ -0.84
FOXF1-201ENST00000262426 M0R2N4 97 aa9.81□□□□□ -0.84
FOXF1-201ENST00000262426 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
FOXF1-201ENST00000262426 COX7B2Q8TF08 81 aa9.81□□□□□ -0.84
FOXF1-201ENST00000262426 CCL18P55774 89 aa9.8□□□□□ -0.84
FOXF1-201ENST00000262426 CHCHD10Q8WYQ3 142 aaPredicted RBP9.8□□□□□ -0.84
FOXF1-201ENST00000262426 SERP1Q9Y6X1 66 aa9.8□□□□□ -0.84
FOXF1-201ENST00000262426 ESRGQ1W209 222 aa9.8□□□□□ -0.84
FOXF1-201ENST00000262426 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
FOXF1-201ENST00000262426 FAM229BQ4G0N7 80 aa9.79□□□□□ -0.84
FOXF1-201ENST00000262426 A0A087WZ39 114 aa9.79□□□□□ -0.84
FOXF1-201ENST00000262426 LELP1Q5T871 98 aa9.79□□□□□ -0.84
FOXF1-201ENST00000262426 TRBV7-6A0A0J9YX20 115 aa9.79□□□□□ -0.84
FOXF1-201ENST00000262426 C6orf226Q5I0X4 101 aa9.79□□□□□ -0.84
FOXF1-201ENST00000262426 UBL5Q9BZL1 73 aa9.78□□□□□ -0.84
FOXF1-201ENST00000262426 CSMD3Q7Z407 3707 aa9.78□□□□□ -0.84
FOXF1-201ENST00000262426 CCKP06307 115 aa9.77□□□□□ -0.85
FOXF1-201ENST00000262426 F8WDY8 70 aa9.77□□□□□ -0.85
FOXF1-201ENST00000262426 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
FOXF1-201ENST00000262426 COPS9Q8WXC6 57 aa9.76□□□□□ -0.85
FOXF1-201ENST00000262426 TM2D3Q9BRN9 247 aa9.76□□□□□ -0.85
FOXF1-201ENST00000262426 LAMTOR3Q9UHA4 124 aa9.76□□□□□ -0.85
FOXF1-201ENST00000262426 C6orf223Q8N319 242 aa9.76□□□□□ -0.85
FOXF1-201ENST00000262426 Q8N9L7 120 aa9.74□□□□□ -0.85
FOXF1-201ENST00000262426 SMIM26A0A096LP01 95 aa9.74□□□□□ -0.85
FOXF1-201ENST00000262426 DNAH9Q9NYC9 4486 aa9.73□□□□□ -0.85
FOXF1-201ENST00000262426 TGP01266 2768 aa9.72□□□□□ -0.85
FOXF1-201ENST00000262426 CD164L2Q6UWJ8 174 aa9.72□□□□□ -0.85
FOXF1-201ENST00000262426 MEGF8Q7Z7M0 2845 aa9.71□□□□□ -0.85
FOXF1-201ENST00000262426 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
FOXF1-201ENST00000262426 H0YGX0 51 aa9.7□□□□□ -0.86
FOXF1-201ENST00000262426 C10orf25Q5T742 122 aa9.7□□□□□ -0.86
FOXF1-201ENST00000262426 PRKDCP78527 4128 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms