RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 NDUFC2O95298 119 aa11.81□□□□□ -0.52
SSB-201ENST00000260956 ESRGQ1W209 222 aa11.81□□□□□ -0.52
SSB-201ENST00000260956 C9orf116Q5BN46 136 aaPredicted RBP11.81□□□□□ -0.52
SSB-201ENST00000260956 C6orf223Q8N319 242 aa11.81□□□□□ -0.52
SSB-201ENST00000260956 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
SSB-201ENST00000260956 SACSQ9NZJ4 4579 aa11.8□□□□□ -0.52
SSB-201ENST00000260956 GVQW2A0A096LPI5 108 aaPredicted RBP11.8□□□□□ -0.52
SSB-201ENST00000260956 UNQ6190/PRO20217Q6UXQ8 127 aa11.79□□□□□ -0.52
SSB-201ENST00000260956 SIGMAR1Q99720 223 aa11.79□□□□□ -0.52
SSB-201ENST00000260956 DEFB131BA0A096LNP1 70 aa11.77□□□□□ -0.52
SSB-201ENST00000260956 C21orf62-AS1Q17RA5 79 aa11.77□□□□□ -0.52
SSB-201ENST00000260956 HYDINQ4G0P3 5121 aa11.77□□□□□ -0.52
SSB-201ENST00000260956 LINC01556Q5JQF7 62 aa11.76□□□□□ -0.53
SSB-201ENST00000260956 LINC00526Q96FQ7 95 aa11.76□□□□□ -0.53
SSB-201ENST00000260956 XGP55808 180 aa11.75□□□□□ -0.53
SSB-201ENST00000260956 RYR2Q92736 4967 aa11.75□□□□□ -0.53
SSB-201ENST00000260956 A0A087WYN8 130 aa11.74□□□□□ -0.53
SSB-201ENST00000260956 PRR3P79522 188 aaKnown RBP11.74□□□□□ -0.53
SSB-201ENST00000260956 C6orf48Q9UBA6 75 aa11.74□□□□□ -0.53
SSB-201ENST00000260956 DNAH1Q9P2D7 4330 aa11.73□□□□□ -0.53
SSB-201ENST00000260956 NUPR2A6NF83 97 aa11.73□□□□□ -0.53
SSB-201ENST00000260956 H0YGX0 51 aa11.73□□□□□ -0.53
SSB-201ENST00000260956 SCGB1A1P11684 91 aa11.73□□□□□ -0.53
SSB-201ENST00000260956 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
SSB-201ENST00000260956 TRAV10A0A0B4J240 114 aa11.71□□□□□ -0.54
SSB-201ENST00000260956 MT-ATP8P03928 68 aa11.71□□□□□ -0.54
SSB-201ENST00000260956 BAALC-AS2P0C853 105 aa11.71□□□□□ -0.54
SSB-201ENST00000260956 DNAH10OSP0CZ25 163 aa11.71□□□□□ -0.54
SSB-201ENST00000260956 FAM240AA0A1B0GVK7 77 aa11.7□□□□□ -0.54
SSB-201ENST00000260956 LINC00167Q96N53 147 aa11.7□□□□□ -0.54
SSB-201ENST00000260956 KMT2AQ03164 3969 aa11.7□□□□□ -0.54
SSB-201ENST00000260956 OR13C6PQ8NH95 151 aa11.69□□□□□ -0.54
SSB-201ENST00000260956 Q9HAA7 133 aa11.69□□□□□ -0.54
SSB-201ENST00000260956 VPS13DQ5THJ4 4388 aa11.68□□□□□ -0.54
SSB-201ENST00000260956 APLNQ9ULZ1 77 aa11.68□□□□□ -0.54
SSB-201ENST00000260956 ALMS1Q8TCU4 4167 aa11.67□□□□□ -0.54
SSB-201ENST00000260956 TMEM126AQ9H061 195 aa11.66□□□□□ -0.54
SSB-201ENST00000260956 C15orf53Q8NAA6 179 aa11.66□□□□□ -0.54
SSB-201ENST00000260956 C2orf48Q96LS8 159 aa11.66□□□□□ -0.54
SSB-201ENST00000260956 OBSCN-AS1Q96MR7 158 aa11.66□□□□□ -0.54
SSB-201ENST00000260956 NCR3O14931 201 aa11.65□□□□□ -0.54
SSB-201ENST00000260956 LECT2O14960 151 aa11.65□□□□□ -0.54
SSB-201ENST00000260956 IGLV6-57P01721 117 aa11.65□□□□□ -0.54
SSB-201ENST00000260956 HIGD2BQ4VC39 106 aa11.65□□□□□ -0.54
SSB-201ENST00000260956 LCE6AA0A183 80 aa11.64□□□□□ -0.55
SSB-201ENST00000260956 A0A1B0GX51 115 aa11.64□□□□□ -0.55
SSB-201ENST00000260956 LINC00588Q9Y4M8 146 aa11.64□□□□□ -0.55
SSB-201ENST00000260956 Q6ZRU5 148 aa11.63□□□□□ -0.55
SSB-201ENST00000260956 C1orf43Q9BWL3 253 aa11.63□□□□□ -0.55
SSB-201ENST00000260956 C9orf129Q5T035 196 aaKnown RBP11.62□□□□□ -0.55
SSB-201ENST00000260956 LINC00476Q8WZB0 136 aa11.61□□□□□ -0.55
SSB-201ENST00000260956 F8WDY8 70 aa11.6□□□□□ -0.55
SSB-201ENST00000260956 SDIM1Q6ZPB5 146 aa11.6□□□□□ -0.55
SSB-201ENST00000260956 CAMK2N2Q96S95 79 aa11.6□□□□□ -0.55
SSB-201ENST00000260956 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
SSB-201ENST00000260956 DNAL4O96015 105 aa11.6□□□□□ -0.55
SSB-201ENST00000260956 VPREB1P12018 145 aa11.59□□□□□ -0.55
SSB-201ENST00000260956 LY6G6CO95867 125 aa11.58□□□□□ -0.56
SSB-201ENST00000260956 C6orf99Q4VX62 202 aa11.58□□□□□ -0.56
SSB-201ENST00000260956 Q8N814 137 aa11.58□□□□□ -0.56
SSB-201ENST00000260956 XAGE1AQ9HD64 81 aa11.58□□□□□ -0.56
SSB-201ENST00000260956 RPL18AQ02543 176 aaKnown RBP11.57□□□□□ -0.56
SSB-201ENST00000260956 UPK3BQ9BT76 320 aa11.57□□□□□ -0.56
SSB-201ENST00000260956 IGKV2D-24A0A075B6R9 120 aa11.57□□□□□ -0.56
SSB-201ENST00000260956 SLPIP03973 132 aa11.57□□□□□ -0.56
SSB-201ENST00000260956 NDUFC2-KCTD14E9PQ53 114 aa11.56□□□□□ -0.56
SSB-201ENST00000260956 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
SSB-201ENST00000260956 ACYP1P07311 99 aa11.55□□□□□ -0.56
SSB-201ENST00000260956 LINC00575Q6W349 94 aa11.55□□□□□ -0.56
SSB-201ENST00000260956 TRBV10-3A0A0K0K1G6 114 aa11.55□□□□□ -0.56
SSB-201ENST00000260956 S100A7L2Q5SY68 101 aa11.55□□□□□ -0.56
SSB-201ENST00000260956 ORMDL1Q9P0S3 153 aa11.55□□□□□ -0.56
SSB-201ENST00000260956 SMCR5Q8TEV8 140 aa11.54□□□□□ -0.56
SSB-201ENST00000260956 SYCNQ0VAF6 134 aa11.52□□□□□ -0.57
SSB-201ENST00000260956 Q6Q795 121 aa11.52□□□□□ -0.57
SSB-201ENST00000260956 Q6ZRP5 223 aa11.52□□□□□ -0.57
SSB-201ENST00000260956 TTC32Q5I0X7 151 aa11.5□□□□□ -0.57
SSB-201ENST00000260956 TRAV23DV6A0A075B6W5 121 aa11.49□□□□□ -0.57
SSB-201ENST00000260956 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
SSB-201ENST00000260956 FRAS1Q86XX4 4008 aa11.49□□□□□ -0.57
SSB-201ENST00000260956 SNCGO76070 127 aa11.49□□□□□ -0.57
SSB-201ENST00000260956 C14orf132Q9NPU4 83 aa11.49□□□□□ -0.57
SSB-201ENST00000260956 DNAH6Q9C0G6 4158 aa11.48□□□□□ -0.57
SSB-201ENST00000260956 DNAH2Q9P225 4427 aa11.48□□□□□ -0.57
SSB-201ENST00000260956 TRBV7-7A0A0K0K1E9 115 aa11.48□□□□□ -0.57
SSB-201ENST00000260956 TRBV7-6A0A0J9YX20 115 aa11.47□□□□□ -0.57
SSB-201ENST00000260956 M0R378 163 aa11.47□□□□□ -0.57
SSB-201ENST00000260956 USP17L23D6RBM5 183 aa11.46□□□□□ -0.57
SSB-201ENST00000260956 DIRC1Q969H9 104 aa11.46□□□□□ -0.58
SSB-201ENST00000260956 ZNF73O43830 326 aaPredicted RBP11.45□□□□□ -0.58
SSB-201ENST00000260956 ELOF1P60002 83 aaKnown RBP11.45□□□□□ -0.58
SSB-201ENST00000260956 hADV29S1A0JD25 119 aa11.44□□□□□ -0.58
SSB-201ENST00000260956 TMEM256-PLSCR3K7ERE1 68 aa11.44□□□□□ -0.58
SSB-201ENST00000260956 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
SSB-201ENST00000260956 KRTAP1-5Q9BYS1 174 aa11.44□□□□□ -0.58
SSB-201ENST00000260956 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
SSB-201ENST00000260956 GAGE2AQ6NT46 116 aa11.43□□□□□ -0.58
SSB-201ENST00000260956 LINC00643Q86TS7 51 aa11.43□□□□□ -0.58
SSB-201ENST00000260956 PLA2G2DQ9UNK4 145 aa11.43□□□□□ -0.58
SSB-201ENST00000260956 GAGE2BQ13066 116 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms