RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
CTDSPL2-201ENST00000260327 COL27A1Q8IZC6 1860 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-201ENST00000260327 ZNF706Q9Y5V0 76 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-201ENST00000260327 LY6G6DO95868 133 aa6.81□□□□□ -1.32
CTDSPL2-201ENST00000260327 SMR3AQ99954 134 aa6.81□□□□□ -1.32
CTDSPL2-201ENST00000260327 IGLV1-51P01701 117 aa6.8□□□□□ -1.32
CTDSPL2-201ENST00000260327 Q6ZQT0 140 aa6.8□□□□□ -1.32
CTDSPL2-201ENST00000260327 LINC00336Q6ZUF6 198 aa6.8□□□□□ -1.32
CTDSPL2-201ENST00000260327 C11orf72Q8NBR9 251 aa6.8□□□□□ -1.32
CTDSPL2-201ENST00000260327 PCSK5Q92824 1860 aa6.8□□□□□ -1.32
CTDSPL2-201ENST00000260327 Q6ZRU5 148 aa6.79□□□□□ -1.32
CTDSPL2-201ENST00000260327 CIRBP-AS1Q8TBR5 109 aa6.79□□□□□ -1.32
CTDSPL2-201ENST00000260327 OXLD1Q5BKU9 147 aa6.79□□□□□ -1.32
CTDSPL2-201ENST00000260327 BCE1O60756 84 aa6.78□□□□□ -1.32
CTDSPL2-201ENST00000260327 PRLHP81277 87 aa6.78□□□□□ -1.32
CTDSPL2-201ENST00000260327 IGHV3OR16-9A0A0B4J2B5 98 aa6.78□□□□□ -1.32
CTDSPL2-201ENST00000260327 SPTBN4Q9H254 2564 aa6.77□□□□□ -1.32
CTDSPL2-201ENST00000260327 CHD8Q9HCK8 2581 aa6.77□□□□□ -1.32
CTDSPL2-201ENST00000260327 A0A1B0GUV1 79 aa6.77□□□□□ -1.33
CTDSPL2-201ENST00000260327 LITAFQ99732 161 aa6.77□□□□□ -1.33
CTDSPL2-201ENST00000260327 CHD7Q9P2D1 2997 aa6.77□□□□□ -1.33
CTDSPL2-201ENST00000260327 MKI67P46013 3256 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-201ENST00000260327 LAMA2P24043 3122 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-201ENST00000260327 A8MUN3 132 aa6.76□□□□□ -1.33
CTDSPL2-201ENST00000260327 LRRK2Q5S007 2527 aa6.76□□□□□ -1.33
CTDSPL2-201ENST00000260327 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
CTDSPL2-201ENST00000260327 MUC4Q99102 2169 aa6.75□□□□□ -1.33
CTDSPL2-201ENST00000260327 A0A1B0GU69 56 aa6.75□□□□□ -1.33
CTDSPL2-201ENST00000260327 POLQO75417 2590 aa6.74□□□□□ -1.33
CTDSPL2-201ENST00000260327 Q6ZTC4 211 aa6.74□□□□□ -1.33
CTDSPL2-201ENST00000260327 CFAP54Q96N23 3096 aa6.74□□□□□ -1.33
CTDSPL2-201ENST00000260327 MTORP42345 2549 aa6.73□□□□□ -1.33
CTDSPL2-201ENST00000260327 EIF4EBP3O60516 100 aaPredicted RBP6.73□□□□□ -1.33
CTDSPL2-201ENST00000260327 COL4A2P08572 1712 aa6.73□□□□□ -1.33
CTDSPL2-201ENST00000260327 LOC110117498A0A087WWA1 95 aa6.73□□□□□ -1.33
CTDSPL2-201ENST00000260327 BRCA2P51587 3418 aa6.72□□□□□ -1.33
CTDSPL2-201ENST00000260327 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.33
CTDSPL2-201ENST00000260327 C22orf24Q9Y442 160 aa6.71□□□□□ -1.33
CTDSPL2-201ENST00000260327 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-201ENST00000260327 C2orf48Q96LS8 159 aa6.71□□□□□ -1.34
CTDSPL2-201ENST00000260327 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
CTDSPL2-201ENST00000260327 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
CTDSPL2-201ENST00000260327 NUPR2A6NF83 97 aa6.7□□□□□ -1.34
CTDSPL2-201ENST00000260327 ELOF1P60002 83 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-201ENST00000260327 LINC01556Q5JQF7 62 aa6.7□□□□□ -1.34
CTDSPL2-201ENST00000260327 IGKV2D-30A0A075B6S6 120 aa6.69□□□□□ -1.34
CTDSPL2-201ENST00000260327 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
CTDSPL2-201ENST00000260327 ATP11AUNQ6ZP68 121 aa6.69□□□□□ -1.34
CTDSPL2-201ENST00000260327 C8orf87E5RJ46 101 aa6.68□□□□□ -1.34
CTDSPL2-201ENST00000260327 HTTP42858 3142 aa6.68□□□□□ -1.34
CTDSPL2-201ENST00000260327 J3QL48 77 aa6.68□□□□□ -1.34
CTDSPL2-201ENST00000260327 ANKRD17O75179 2603 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-201ENST00000260327 ST20-AS1Q8NBB2 130 aa6.67□□□□□ -1.34
CTDSPL2-201ENST00000260327 C7orf65Q6ZTY9 151 aa6.67□□□□□ -1.34
CTDSPL2-201ENST00000260327 LAMA3Q16787 3333 aa6.67□□□□□ -1.34
CTDSPL2-201ENST00000260327 H7BZZ5 65 aa6.66□□□□□ -1.34
CTDSPL2-201ENST00000260327 RANBP2P49792 3224 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-201ENST00000260327 LINC00167Q96N53 147 aa6.66□□□□□ -1.34
CTDSPL2-201ENST00000260327 ACYP2P14621 99 aa6.66□□□□□ -1.34
CTDSPL2-201ENST00000260327 C16orf95Q9H693 158 aa6.66□□□□□ -1.34
CTDSPL2-201ENST00000260327 LINC00476Q8WZB0 136 aa6.65□□□□□ -1.34
CTDSPL2-201ENST00000260327 Q8NBF4 154 aa6.65□□□□□ -1.34
CTDSPL2-201ENST00000260327 ACANP16112 2415 aa6.65□□□□□ -1.34
CTDSPL2-201ENST00000260327 K7EQZ3 153 aa6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 VPREB1P12018 145 aa6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 TRBV7-4A0A0J9YYF1 115 aa6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 CD164Q04900 197 aa6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 TRAV22A0A0B4J277 110 aa6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 KLKP1Q107X0 134 aa6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 ZNF462Q96JM2 2506 aa6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 COA5Q86WW8 74 aa6.64□□□□□ -1.35
CTDSPL2-201ENST00000260327 F8WDY8 70 aa6.63□□□□□ -1.35
CTDSPL2-201ENST00000260327 COX6B2Q6YFQ2 88 aa6.63□□□□□ -1.35
CTDSPL2-201ENST00000260327 TP53AIP1Q9HCN2 124 aa6.62□□□□□ -1.35
CTDSPL2-201ENST00000260327 UNC80Q8N2C7 3258 aa6.62□□□□□ -1.35
CTDSPL2-201ENST00000260327 SPINT4Q6UDR6 99 aa6.61□□□□□ -1.35
CTDSPL2-201ENST00000260327 ERC2-IT1O76042 136 aa6.61□□□□□ -1.35
CTDSPL2-201ENST00000260327 H3BPC8 53 aa6.6□□□□□ -1.35
CTDSPL2-201ENST00000260327 Q6ZRX8 168 aa6.6□□□□□ -1.35
CTDSPL2-201ENST00000260327 MOBPQ13875 183 aa6.59□□□□□ -1.35
CTDSPL2-201ENST00000260327 KLK9Q2XQG4 91 aa6.59□□□□□ -1.36
CTDSPL2-201ENST00000260327 CYP4F30PQ9H0H9 118 aa6.58□□□□□ -1.36
CTDSPL2-201ENST00000260327 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
CTDSPL2-201ENST00000260327 A0A1B0GW54 56 aa6.57□□□□□ -1.36
CTDSPL2-201ENST00000260327 IGLV6-57P01721 117 aa6.57□□□□□ -1.36
CTDSPL2-201ENST00000260327 IGLV5-52A0A0A0MRZ9 124 aa6.57□□□□□ -1.36
CTDSPL2-201ENST00000260327 LOC101927531A0A1B0GV80 90 aa6.56□□□□□ -1.36
CTDSPL2-201ENST00000260327 XIRP2A4UGR9 3374 aa6.56□□□□□ -1.36
CTDSPL2-201ENST00000260327 CHD9Q3L8U1 2897 aa6.55□□□□□ -1.36
CTDSPL2-201ENST00000260327 SSBP3-AS1Q7Z2R9 100 aa6.55□□□□□ -1.36
CTDSPL2-201ENST00000260327 PHF5AQ7RTV0 110 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-201ENST00000260327 Q6ZRP5 223 aa6.54□□□□□ -1.36
CTDSPL2-201ENST00000260327 LINC01600Q96MT4 127 aa6.54□□□□□ -1.36
CTDSPL2-201ENST00000260327 FAM168BA1KXE4 195 aa6.54□□□□□ -1.36
CTDSPL2-201ENST00000260327 A0A0G2JQZ4 141 aa6.53□□□□□ -1.36
CTDSPL2-201ENST00000260327 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
CTDSPL2-201ENST00000260327 PRUNE2Q8WUY3 3088 aa6.53□□□□□ -1.36
CTDSPL2-201ENST00000260327 WIPF1O43516 503 aa6.53□□□□□ -1.36
CTDSPL2-201ENST00000260327 SPACA4Q8TDM5 124 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms