RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 COL6A5A8TX70 2615 aa16.78■□□□□ 0.28
TMEM55B-201ENST00000250489 C15orf56Q8N910 161 aa16.78■□□□□ 0.28
TMEM55B-201ENST00000250489 C1orf43Q9BWL3 253 aa16.78■□□□□ 0.28
TMEM55B-201ENST00000250489 S100A7L2Q5SY68 101 aa16.77■□□□□ 0.27
TMEM55B-201ENST00000250489 CAMK2N2Q96S95 79 aa16.77■□□□□ 0.27
TMEM55B-201ENST00000250489 NOTCH1P46531 2555 aa16.76■□□□□ 0.27
TMEM55B-201ENST00000250489 C15orf53Q8NAA6 179 aa16.76■□□□□ 0.27
TMEM55B-201ENST00000250489 MRAPQ8TCY5 172 aa16.75■□□□□ 0.27
TMEM55B-201ENST00000250489 DNAH10OSP0CZ25 163 aa16.75■□□□□ 0.27
TMEM55B-201ENST00000250489 A0A1B0GX51 115 aa16.74■□□□□ 0.27
TMEM55B-201ENST00000250489 LINC00167Q96N53 147 aa16.73■□□□□ 0.27
TMEM55B-201ENST00000250489 SLPIP03973 132 aa16.73■□□□□ 0.27
TMEM55B-201ENST00000250489 INAFM2P0DMQ5 153 aa16.73■□□□□ 0.27
TMEM55B-201ENST00000250489 C2orf48Q96LS8 159 aa16.73■□□□□ 0.27
TMEM55B-201ENST00000250489 IGKV2D-24A0A075B6R9 120 aa16.72■□□□□ 0.27
TMEM55B-201ENST00000250489 SNCGO76070 127 aa16.72■□□□□ 0.27
TMEM55B-201ENST00000250489 C6orf99Q4VX62 202 aa16.72■□□□□ 0.27
TMEM55B-201ENST00000250489 ACYP1P07311 99 aa16.71■□□□□ 0.27
TMEM55B-201ENST00000250489 RPL18AQ02543 176 aaKnown RBP16.71■□□□□ 0.27
TMEM55B-201ENST00000250489 XAGE1AQ9HD64 81 aa16.71■□□□□ 0.27
TMEM55B-201ENST00000250489 IGLV6-57P01721 117 aa16.71■□□□□ 0.27
TMEM55B-201ENST00000250489 Q6ZRU5 148 aa16.71■□□□□ 0.27
TMEM55B-201ENST00000250489 Q8N814 137 aa16.71■□□□□ 0.27
TMEM55B-201ENST00000250489 ORMDL1Q9P0S3 153 aa16.7■□□□□ 0.26
TMEM55B-201ENST00000250489 C9orf129Q5T035 196 aaKnown RBP16.69■□□□□ 0.26
TMEM55B-201ENST00000250489 LINC00588Q9Y4M8 146 aa16.69■□□□□ 0.26
TMEM55B-201ENST00000250489 OBSCN-AS1Q96MR7 158 aa16.68■□□□□ 0.26
TMEM55B-201ENST00000250489 HUWE1Q7Z6Z7 4374 aaKnown RBP16.68■□□□□ 0.26
TMEM55B-201ENST00000250489 TTC32Q5I0X7 151 aa16.66■□□□□ 0.26
TMEM55B-201ENST00000250489 NBEAL1Q6ZS30 2694 aa16.64■□□□□ 0.25
TMEM55B-201ENST00000250489 F8WDY8 70 aa16.64■□□□□ 0.25
TMEM55B-201ENST00000250489 NDUFC2-KCTD14E9PQ53 114 aa16.62■□□□□ 0.25
TMEM55B-201ENST00000250489 LINC00575Q6W349 94 aa16.62■□□□□ 0.25
TMEM55B-201ENST00000250489 TRBV10-3A0A0K0K1G6 114 aa16.62■□□□□ 0.25
TMEM55B-201ENST00000250489 GAGE2BQ13066 116 aa16.61■□□□□ 0.25
TMEM55B-201ENST00000250489 GAGE2EQ4V326 116 aa16.61■□□□□ 0.25
TMEM55B-201ENST00000250489 C14orf132Q9NPU4 83 aa16.61■□□□□ 0.25
TMEM55B-201ENST00000250489 GAGE2DQ9UEU5 116 aa16.61■□□□□ 0.25
TMEM55B-201ENST00000250489 VPREB1P12018 145 aa16.6■□□□□ 0.25
TMEM55B-201ENST00000250489 GAGE2AQ6NT46 116 aa16.6■□□□□ 0.25
TMEM55B-201ENST00000250489 Q6Q795 121 aa16.59■□□□□ 0.25
TMEM55B-201ENST00000250489 SYCNQ0VAF6 134 aa16.58■□□□□ 0.25
TMEM55B-201ENST00000250489 TRAV23DV6A0A075B6W5 121 aa16.58■□□□□ 0.24
TMEM55B-201ENST00000250489 SMCR5Q8TEV8 140 aa16.58■□□□□ 0.24
TMEM55B-201ENST00000250489 SDIM1Q6ZPB5 146 aa16.57■□□□□ 0.24
TMEM55B-201ENST00000250489 TMEM256-PLSCR3K7ERE1 68 aa16.56■□□□□ 0.24
TMEM55B-201ENST00000250489 Q6ZRP5 223 aa16.55■□□□□ 0.24
TMEM55B-201ENST00000250489 hADV29S1A0JD25 119 aa16.55■□□□□ 0.24
TMEM55B-201ENST00000250489 DIRC1Q969H9 104 aa16.54■□□□□ 0.24
TMEM55B-201ENST00000250489 M0R378 163 aa16.53■□□□□ 0.24
TMEM55B-201ENST00000250489 A0A1B0GV72 72 aa16.53■□□□□ 0.24
TMEM55B-201ENST00000250489 UPK3BQ9BT76 320 aa16.53■□□□□ 0.24
TMEM55B-201ENST00000250489 LINC00643Q86TS7 51 aa16.51■□□□□ 0.23
TMEM55B-201ENST00000250489 TRBV7-7A0A0K0K1E9 115 aa16.51■□□□□ 0.23
TMEM55B-201ENST00000250489 ZNF73O43830 326 aaPredicted RBP16.51■□□□□ 0.23
TMEM55B-201ENST00000250489 JMJD7-PLA2G4BH0Y9G9 81 aa16.5■□□□□ 0.23
TMEM55B-201ENST00000250489 CASC10Q5T4H9 136 aa16.5■□□□□ 0.23
TMEM55B-201ENST00000250489 DNAH1Q9P2D7 4330 aa16.49■□□□□ 0.23
TMEM55B-201ENST00000250489 USP17L23D6RBM5 183 aa16.48■□□□□ 0.23
TMEM55B-201ENST00000250489 RMI2Q96E14 147 aa16.48■□□□□ 0.23
TMEM55B-201ENST00000250489 MDFIQ99750 246 aa16.48■□□□□ 0.23
TMEM55B-201ENST00000250489 MGAM2Q2M2H8 2515 aa16.47■□□□□ 0.23
TMEM55B-201ENST00000250489 COX7BP24311 80 aa16.46■□□□□ 0.23
TMEM55B-201ENST00000250489 TRBV7-6A0A0J9YX20 115 aa16.46■□□□□ 0.22
TMEM55B-201ENST00000250489 ELOF1P60002 83 aaKnown RBP16.45■□□□□ 0.22
TMEM55B-201ENST00000250489 TLX1NBP0CAT3 122 aa16.44■□□□□ 0.22
TMEM55B-201ENST00000250489 CCKP06307 115 aa16.43■□□□□ 0.22
TMEM55B-201ENST00000250489 NDUFV3P56181 108 aaKnown RBP16.43■□□□□ 0.22
TMEM55B-201ENST00000250489 Q6ZQY7 126 aa16.43■□□□□ 0.22
TMEM55B-201ENST00000250489 ANAPC13Q9BS18 74 aa16.42■□□□□ 0.22
TMEM55B-201ENST00000250489 IMUPQ9GZP8 106 aa16.42■□□□□ 0.22
TMEM55B-201ENST00000250489 LINC00846Q9NV44 126 aa16.41■□□□□ 0.22
TMEM55B-201ENST00000250489 SERTAD4-AS1Q5TG53 156 aa16.39■□□□□ 0.21
TMEM55B-201ENST00000250489 DNAH9Q9NYC9 4486 aa16.38■□□□□ 0.21
TMEM55B-201ENST00000250489 H3BQ85 93 aa16.37■□□□□ 0.21
TMEM55B-201ENST00000250489 NHLRC4P0CG21 123 aaPredicted RBP16.37■□□□□ 0.21
TMEM55B-201ENST00000250489 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.37■□□□□ 0.21
TMEM55B-201ENST00000250489 NKAPP1Q8N9T2 125 aa16.37■□□□□ 0.21
TMEM55B-201ENST00000250489 PLA2G2DQ9UNK4 145 aa16.36■□□□□ 0.21
TMEM55B-201ENST00000250489 LINC00528Q8N1L1 170 aa16.35■□□□□ 0.21
TMEM55B-201ENST00000250489 B9D2Q9BPU9 175 aa16.35■□□□□ 0.21
TMEM55B-201ENST00000250489 LAMTOR3Q9UHA4 124 aa16.35■□□□□ 0.21
TMEM55B-201ENST00000250489 C7orf33Q8WU49 177 aa16.34■□□□□ 0.21
TMEM55B-201ENST00000250489 RBM3P98179 157 aaKnown RBP16.33■□□□□ 0.21
TMEM55B-201ENST00000250489 KRTAP1-5Q9BYS1 174 aa16.32■□□□□ 0.2
TMEM55B-201ENST00000250489 KCNQ1DNQ9H478 68 aa16.32■□□□□ 0.2
TMEM55B-201ENST00000250489 APLNQ9ULZ1 77 aa16.32■□□□□ 0.2
TMEM55B-201ENST00000250489 COL7A1Q02388 2944 aa16.3■□□□□ 0.2
TMEM55B-201ENST00000250489 LOC110117498A0A087WWA1 95 aa16.29■□□□□ 0.2
TMEM55B-201ENST00000250489 Q6JHZ5 121 aa16.29■□□□□ 0.2
TMEM55B-201ENST00000250489 IGLV5-37A0A075B6J1 123 aa16.29■□□□□ 0.2
TMEM55B-201ENST00000250489 Q6ZQT0 140 aa16.29■□□□□ 0.2
TMEM55B-201ENST00000250489 FAM168BA1KXE4 195 aa16.27■□□□□ 0.2
TMEM55B-201ENST00000250489 GHRHP01286 108 aa16.27■□□□□ 0.2
TMEM55B-201ENST00000250489 STAB2Q8WWQ8 2551 aa16.27■□□□□ 0.2
TMEM55B-201ENST00000250489 UBE2DNLQ8IWF7 75 aa16.26■□□□□ 0.19
TMEM55B-201ENST00000250489 FAM236AA0A1B0GUQ0 79 aa16.26■□□□□ 0.19
TMEM55B-201ENST00000250489 FAM236BA0A1B0GV22 79 aa16.26■□□□□ 0.19
TMEM55B-201ENST00000250489 DYNC2H1Q8NCM8 4307 aaKnown RBP16.24■□□□□ 0.19
TMEM55B-201ENST00000250489 LOC107984640A0A0U1RRK4 108 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms