RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MIR7-3HGQ8N6C7 128 aa8.39□□□□□ -1.07
LSM8-201ENST00000249299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.39□□□□□ -1.07
LSM8-201ENST00000249299 LOC107984640A0A0U1RRK4 108 aa8.38□□□□□ -1.07
LSM8-201ENST00000249299 C9orf116Q5BN46 136 aaPredicted RBP8.38□□□□□ -1.07
LSM8-201ENST00000249299 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
LSM8-201ENST00000249299 DNAH10Q8IVF4 4471 aa8.38□□□□□ -1.07
LSM8-201ENST00000249299 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
LSM8-201ENST00000249299 SND1-IT1Q9HBX3 110 aa8.36□□□□□ -1.07
LSM8-201ENST00000249299 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
LSM8-201ENST00000249299 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.35□□□□□ -1.07
LSM8-201ENST00000249299 NDUFC2O95298 119 aa8.35□□□□□ -1.07
LSM8-201ENST00000249299 Q6ZRP5 223 aa8.35□□□□□ -1.07
LSM8-201ENST00000249299 DNAH17Q9UFH2 4485 aa8.35□□□□□ -1.07
LSM8-201ENST00000249299 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
LSM8-201ENST00000249299 PCP4L1A6NKN8 68 aa8.34□□□□□ -1.07
LSM8-201ENST00000249299 C16orf90A8MZG2 172 aa8.34□□□□□ -1.07
LSM8-201ENST00000249299 BVES-AS1Q5T3Y7 98 aa8.34□□□□□ -1.07
LSM8-201ENST00000249299 PLA2G2DQ9UNK4 145 aa8.34□□□□□ -1.07
LSM8-201ENST00000249299 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
LSM8-201ENST00000249299 DAND5Q8N907 189 aa8.33□□□□□ -1.08
LSM8-201ENST00000249299 KMT2CQ8NEZ4 4911 aaKnown RBP8.33□□□□□ -1.08
LSM8-201ENST00000249299 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
LSM8-201ENST00000249299 SOSTDC1Q6X4U4 206 aa8.32□□□□□ -1.08
LSM8-201ENST00000249299 HYDINQ4G0P3 5121 aa8.31□□□□□ -1.08
LSM8-201ENST00000249299 A0A1B0GWB2 263 aa8.31□□□□□ -1.08
LSM8-201ENST00000249299 A6NDN8 102 aa8.31□□□□□ -1.08
LSM8-201ENST00000249299 A0A0B4J2C4 111 aa8.3□□□□□ -1.08
LSM8-201ENST00000249299 TRBV10-2A0A0K0K1G8 114 aa8.3□□□□□ -1.08
LSM8-201ENST00000249299 A4D1N5 150 aa8.3□□□□□ -1.08
LSM8-201ENST00000249299 HINT1P49773 126 aaPredicted RBP8.3□□□□□ -1.08
LSM8-201ENST00000249299 FXYD2P54710 66 aa8.3□□□□□ -1.08
LSM8-201ENST00000249299 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
LSM8-201ENST00000249299 GAGE2EQ4V326 116 aa8.29□□□□□ -1.08
LSM8-201ENST00000249299 GAGE2DQ9UEU5 116 aa8.29□□□□□ -1.08
LSM8-201ENST00000249299 RYR2Q92736 4967 aa8.29□□□□□ -1.08
LSM8-201ENST00000249299 IGLV5-37A0A075B6J1 123 aa8.29□□□□□ -1.08
LSM8-201ENST00000249299 TRAV13-2A0A0B4J235 113 aa8.29□□□□□ -1.08
LSM8-201ENST00000249299 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
LSM8-201ENST00000249299 LBHQ53QV2 105 aaPredicted RBP8.29□□□□□ -1.08
LSM8-201ENST00000249299 C9orf129Q5T035 196 aaKnown RBP8.29□□□□□ -1.08
LSM8-201ENST00000249299 XAGE1AQ9HD64 81 aa8.29□□□□□ -1.08
LSM8-201ENST00000249299 FRAS1Q86XX4 4008 aa8.28□□□□□ -1.08
LSM8-201ENST00000249299 SNHG12Q9BXW3 62 aa8.28□□□□□ -1.08
LSM8-201ENST00000249299 A0A096LNI7 61 aa8.27□□□□□ -1.09
LSM8-201ENST00000249299 CFC1BP0CG36 223 aa8.27□□□□□ -1.09
LSM8-201ENST00000249299 CFC1P0CG37 223 aa8.27□□□□□ -1.09
LSM8-201ENST00000249299 NPC2P61916 151 aa8.27□□□□□ -1.09
LSM8-201ENST00000249299 CBY1Q9Y3M2 126 aa8.27□□□□□ -1.09
LSM8-201ENST00000249299 EPM2AB3EWF7 344 aa8.26□□□□□ -1.09
LSM8-201ENST00000249299 VPREB1P12018 145 aa8.26□□□□□ -1.09
LSM8-201ENST00000249299 NHP2Q9NX24 153 aaKnown RBP8.26□□□□□ -1.09
LSM8-201ENST00000249299 FAT2Q9NYQ8 4349 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 M0R378 163 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 COL5A1-AS1Q5SY13 56 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 RAB37Q96AX2 223 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 TMEM126AQ9H061 195 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 PRO1854Q9UHT4 67 aa8.25□□□□□ -1.09
LSM8-201ENST00000249299 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
LSM8-201ENST00000249299 BATFQ16520 125 aa8.23□□□□□ -1.09
LSM8-201ENST00000249299 NKAPP1Q8N9T2 125 aa8.23□□□□□ -1.09
LSM8-201ENST00000249299 HECTD4Q9Y4D8 3996 aa8.22□□□□□ -1.09
LSM8-201ENST00000249299 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
LSM8-201ENST00000249299 Q6ZSA8 131 aa8.22□□□□□ -1.09
LSM8-201ENST00000249299 DNAH11Q96DT5 4516 aa8.21□□□□□ -1.09
LSM8-201ENST00000249299 IGLV6-57P01721 117 aa8.21□□□□□ -1.1
LSM8-201ENST00000249299 LINC00337Q8N6G1 96 aa8.21□□□□□ -1.1
LSM8-201ENST00000249299 Q8NDZ9 215 aa8.21□□□□□ -1.1
LSM8-201ENST00000249299 KRTAP4-7Q9BYR0 210 aa8.21□□□□□ -1.1
LSM8-201ENST00000249299 LINC01620Q4KN68 170 aa8.2□□□□□ -1.1
LSM8-201ENST00000249299 S100A7L2Q5SY68 101 aa8.2□□□□□ -1.1
LSM8-201ENST00000249299 SERTAD4-AS1Q5TG53 156 aa8.2□□□□□ -1.1
LSM8-201ENST00000249299 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
LSM8-201ENST00000249299 C22orf24Q9Y442 160 aa8.2□□□□□ -1.1
LSM8-201ENST00000249299 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
LSM8-201ENST00000249299 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
LSM8-201ENST00000249299 CHTF8P0CG12 524 aa8.18□□□□□ -1.1
LSM8-201ENST00000249299 RPL13AP40429 203 aaKnown RBP8.18□□□□□ -1.1
LSM8-201ENST00000249299 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
LSM8-201ENST00000249299 KRTAP7-1Q8IUC3 87 aa8.18□□□□□ -1.1
LSM8-201ENST00000249299 DPH3Q96FX2 82 aa8.18□□□□□ -1.1
LSM8-201ENST00000249299 PKD1P98161 4303 aa8.18□□□□□ -1.1
LSM8-201ENST00000249299 A0A087WYN8 130 aa8.17□□□□□ -1.1
LSM8-201ENST00000249299 FAM168BA1KXE4 195 aa8.17□□□□□ -1.1
LSM8-201ENST00000249299 K7ERJ3 54 aa8.17□□□□□ -1.1
LSM8-201ENST00000249299 M0QXV9 152 aa8.17□□□□□ -1.1
LSM8-201ENST00000249299 NCR3O14931 201 aa8.17□□□□□ -1.1
LSM8-201ENST00000249299 RPL28P46779 137 aaKnown RBP8.17□□□□□ -1.1
LSM8-201ENST00000249299 LCE1DQ5T752 114 aa8.17□□□□□ -1.1
LSM8-201ENST00000249299 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
LSM8-201ENST00000249299 OR13C6PQ8NH95 151 aa8.17□□□□□ -1.1
LSM8-201ENST00000249299 PANO1I0J062 215 aa8.16□□□□□ -1.1
LSM8-201ENST00000249299 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
LSM8-201ENST00000249299 C7orf33Q8WU49 177 aa8.16□□□□□ -1.1
LSM8-201ENST00000249299 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
LSM8-201ENST00000249299 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
LSM8-201ENST00000249299 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms