RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 SERTAD4-AS1Q5TG53 156 aa12.74□□□□□ -0.37
SNRPA-201ENST00000243563 LINC00587B1AMM8 73 aa12.73□□□□□ -0.37
SNRPA-201ENST00000243563 A0A087WYN8 130 aa12.73□□□□□ -0.37
SNRPA-201ENST00000243563 SCXQ7RTU7 201 aa12.72□□□□□ -0.37
SNRPA-201ENST00000243563 SPANXDQ9BXN6 97 aa12.72□□□□□ -0.37
SNRPA-201ENST00000243563 SPANXCQ9NY87 97 aa12.72□□□□□ -0.37
SNRPA-201ENST00000243563 PKIGQ9Y2B9 76 aa12.72□□□□□ -0.37
SNRPA-201ENST00000243563 TMEM238C9JI98 176 aa12.71□□□□□ -0.37
SNRPA-201ENST00000243563 FAM19A5Q7Z5A7 132 aaPredicted RBP12.71□□□□□ -0.37
SNRPA-201ENST00000243563 CIRBP-AS1Q8TBR5 109 aa12.71□□□□□ -0.37
SNRPA-201ENST00000243563 XGP55808 180 aa12.7□□□□□ -0.38
SNRPA-201ENST00000243563 LINC00308Q8TCZ7 52 aa12.7□□□□□ -0.38
SNRPA-201ENST00000243563 LINC00474Q9P2X8 69 aa12.7□□□□□ -0.38
SNRPA-201ENST00000243563 DPH3Q96FX2 82 aa12.69□□□□□ -0.38
SNRPA-201ENST00000243563 SPANXB1Q9NS25 103 aaPredicted RBP12.69□□□□□ -0.38
SNRPA-201ENST00000243563 UQCR10Q9UDW1 63 aa12.69□□□□□ -0.38
SNRPA-201ENST00000243563 LOC107984156A0A0G2JMH3 177 aa12.68□□□□□ -0.38
SNRPA-201ENST00000243563 PRR3P79522 188 aaKnown RBP12.68□□□□□ -0.38
SNRPA-201ENST00000243563 ARL17AQ8IVW1 177 aa12.68□□□□□ -0.38
SNRPA-201ENST00000243563 PLAC8Q9NZF1 115 aa12.68□□□□□ -0.38
SNRPA-201ENST00000243563 VPREB1P12018 145 aa12.67□□□□□ -0.38
SNRPA-201ENST00000243563 MUSTN1Q8IVN3 82 aa12.67□□□□□ -0.38
SNRPA-201ENST00000243563 HIGD1BQ9P298 99 aa12.67□□□□□ -0.38
SNRPA-201ENST00000243563 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
SNRPA-201ENST00000243563 MIEN1Q9BRT3 115 aa12.66□□□□□ -0.38
SNRPA-201ENST00000243563 PLA2G2DQ9UNK4 145 aa12.65□□□□□ -0.38
SNRPA-201ENST00000243563 BIRC6Q9NR09 4857 aa12.64□□□□□ -0.39
SNRPA-201ENST00000243563 SRSF9Q13242 221 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNRPA-201ENST00000243563 PHF5AQ7RTV0 110 aaKnown RBP12.64□□□□□ -0.39
SNRPA-201ENST00000243563 KIAA1109Q2LD37 5005 aa12.64□□□□□ -0.39
SNRPA-201ENST00000243563 RYR1P21817 5038 aa12.63□□□□□ -0.39
SNRPA-201ENST00000243563 HIST1H4GQ99525 98 aa12.62□□□□□ -0.39
SNRPA-201ENST00000243563 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
SNRPA-201ENST00000243563 HSPG2P98160 4391 aa12.62□□□□□ -0.39
SNRPA-201ENST00000243563 IGLV5-37A0A075B6J1 123 aa12.62□□□□□ -0.39
SNRPA-201ENST00000243563 M0QXV9 152 aa12.62□□□□□ -0.39
SNRPA-201ENST00000243563 NCR3O14931 201 aa12.62□□□□□ -0.39
SNRPA-201ENST00000243563 KRTAP11-1Q8IUC1 163 aa12.62□□□□□ -0.39
SNRPA-201ENST00000243563 Q6ZVH6 145 aa12.61□□□□□ -0.39
SNRPA-201ENST00000243563 IFITM1P13164 125 aa12.6□□□□□ -0.39
SNRPA-201ENST00000243563 HNRNPA3P51991 378 aaKnown RBP12.6□□□□□ -0.39
SNRPA-201ENST00000243563 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
SNRPA-201ENST00000243563 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
SNRPA-201ENST00000243563 GAGE10A6NGK3 116 aa12.59□□□□□ -0.39
SNRPA-201ENST00000243563 C7orf33Q8WU49 177 aa12.59□□□□□ -0.39
SNRPA-201ENST00000243563 KRTAP17-1Q9BYP8 105 aa12.59□□□□□ -0.39
SNRPA-201ENST00000243563 TSTD3H0UI37 97 aa12.57□□□□□ -0.4
SNRPA-201ENST00000243563 CDK2AP2O75956 126 aa12.57□□□□□ -0.4
SNRPA-201ENST00000243563 RPL24P83731 157 aaKnown RBP12.57□□□□□ -0.4
SNRPA-201ENST00000243563 NKAPP1Q8N9T2 125 aa12.57□□□□□ -0.4
SNRPA-201ENST00000243563 A4D1N5 150 aa12.56□□□□□ -0.4
SNRPA-201ENST00000243563 NDUFC2O95298 119 aa12.56□□□□□ -0.4
SNRPA-201ENST00000243563 SMR3BP02814 79 aaPredicted RBP12.56□□□□□ -0.4
SNRPA-201ENST00000243563 MRPL55Q7Z7F7 128 aaKnown RBP12.56□□□□□ -0.4
SNRPA-201ENST00000243563 LINC00167Q96N53 147 aa12.56□□□□□ -0.4
SNRPA-201ENST00000243563 PPDPFQ9H3Y8 114 aa12.56□□□□□ -0.4
SNRPA-201ENST00000243563 RPL37AP8A6NKH3 93 aa12.55□□□□□ -0.4
SNRPA-201ENST00000243563 FXYD2P54710 66 aa12.55□□□□□ -0.4
SNRPA-201ENST00000243563 TAL2Q16559 108 aa12.55□□□□□ -0.4
SNRPA-201ENST00000243563 CEND1Q8N111 149 aa12.55□□□□□ -0.4
SNRPA-201ENST00000243563 HSD52Q0P140 79 aa12.54□□□□□ -0.4
SNRPA-201ENST00000243563 LINC00337Q8N6G1 96 aa12.54□□□□□ -0.4
SNRPA-201ENST00000243563 CTAG1AP78358 180 aa12.53□□□□□ -0.4
SNRPA-201ENST00000243563 FAT1Q14517 4588 aa12.52□□□□□ -0.4
SNRPA-201ENST00000243563 M0R378 163 aa12.52□□□□□ -0.4
SNRPA-201ENST00000243563 TRBV10-3A0A0K0K1G6 114 aa12.51□□□□□ -0.41
SNRPA-201ENST00000243563 COPS9Q8WXC6 57 aa12.51□□□□□ -0.41
SNRPA-201ENST00000243563 TRBV10-2A0A0K0K1G8 114 aa12.5□□□□□ -0.41
SNRPA-201ENST00000243563 IGLV1-50A0A075B6I6 118 aa12.49□□□□□ -0.41
SNRPA-201ENST00000243563 DDTP30046 118 aa12.49□□□□□ -0.41
SNRPA-201ENST00000243563 UBE2BP63146 152 aa12.48□□□□□ -0.41
SNRPA-201ENST00000243563 LBHQ53QV2 105 aaPredicted RBP12.48□□□□□ -0.41
SNRPA-201ENST00000243563 LINC00528Q8N1L1 170 aa12.48□□□□□ -0.41
SNRPA-201ENST00000243563 IGLV6-57P01721 117 aa12.47□□□□□ -0.41
SNRPA-201ENST00000243563 CFC1BP0CG36 223 aa12.47□□□□□ -0.41
SNRPA-201ENST00000243563 CFC1P0CG37 223 aa12.47□□□□□ -0.41
SNRPA-201ENST00000243563 HINT1P49773 126 aaPredicted RBP12.46□□□□□ -0.41
SNRPA-201ENST00000243563 VPS13BQ7Z7G8 4022 aa12.46□□□□□ -0.41
SNRPA-201ENST00000243563 BVES-AS1Q5T3Y7 98 aa12.45□□□□□ -0.42
SNRPA-201ENST00000243563 PSORS1C2Q9UIG4 136 aa12.45□□□□□ -0.42
SNRPA-201ENST00000243563 OR13C6PQ8NH95 151 aa12.44□□□□□ -0.42
SNRPA-201ENST00000243563 S100A7L2Q5SY68 101 aa12.44□□□□□ -0.42
SNRPA-201ENST00000243563 K7ERJ3 54 aa12.43□□□□□ -0.42
SNRPA-201ENST00000243563 A6NDN8 102 aa12.42□□□□□ -0.42
SNRPA-201ENST00000243563 KRTAP10-4P60372 401 aaPredicted RBP12.42□□□□□ -0.42
SNRPA-201ENST00000243563 NHP2Q9NX24 153 aaKnown RBP12.41□□□□□ -0.42
SNRPA-201ENST00000243563 KCNQ1DNQ9H478 68 aa12.4□□□□□ -0.42
SNRPA-201ENST00000243563 PCP4L1A6NKN8 68 aa12.4□□□□□ -0.42
SNRPA-201ENST00000243563 TMEM126AQ9H061 195 aa12.4□□□□□ -0.42
SNRPA-201ENST00000243563 A0A0B4J2C4 111 aa12.39□□□□□ -0.43
SNRPA-201ENST00000243563 RPL13AP40429 203 aaKnown RBP12.39□□□□□ -0.43
SNRPA-201ENST00000243563 TRAV13-2A0A0B4J235 113 aa12.38□□□□□ -0.43
SNRPA-201ENST00000243563 HERC2O95714 4834 aa12.38□□□□□ -0.43
SNRPA-201ENST00000243563 TRAV23DV6A0A075B6W5 121 aa12.37□□□□□ -0.43
SNRPA-201ENST00000243563 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
SNRPA-201ENST00000243563 A0A1B0GWB2 263 aa12.37□□□□□ -0.43
SNRPA-201ENST00000243563 A6NJY4 79 aa12.37□□□□□ -0.43
SNRPA-201ENST00000243563 PRYO14603 147 aa12.37□□□□□ -0.43
SNRPA-201ENST00000243563 RPL37AP61513 92 aaKnown RBP12.37□□□□□ -0.43
SNRPA-201ENST00000243563 C1orf137Q5JT78 98 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms