RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
HDHD3-201ENST00000238379 VPS13DQ5THJ4 4388 aa9.93□□□□□ -0.82
HDHD3-201ENST00000238379 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
HDHD3-201ENST00000238379 XAGE1AQ9HD64 81 aa9.93□□□□□ -0.82
HDHD3-201ENST00000238379 LYRM7Q5U5X0 104 aa9.92□□□□□ -0.82
HDHD3-201ENST00000238379 Q6ZRN7 208 aaPredicted RBP9.92□□□□□ -0.82
HDHD3-201ENST00000238379 SCGB1C2P0DMR2 95 aa9.91□□□□□ -0.82
HDHD3-201ENST00000238379 Q6ZRP5 223 aa9.91□□□□□ -0.82
HDHD3-201ENST00000238379 M0R2N4 97 aa9.91□□□□□ -0.82
HDHD3-201ENST00000238379 H3BMG7 143 aa9.89□□□□□ -0.83
HDHD3-201ENST00000238379 TCL1BO95988 128 aa9.89□□□□□ -0.83
HDHD3-201ENST00000238379 TLX1NBP0CAT3 122 aa9.89□□□□□ -0.83
HDHD3-201ENST00000238379 Q6ZR54 194 aa9.89□□□□□ -0.83
HDHD3-201ENST00000238379 TRBV20-1A0A075B6N2 111 aa9.89□□□□□ -0.83
HDHD3-201ENST00000238379 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
HDHD3-201ENST00000238379 GAGE2EQ4V326 116 aa9.88□□□□□ -0.83
HDHD3-201ENST00000238379 OR13C6PQ8NH95 151 aa9.88□□□□□ -0.83
HDHD3-201ENST00000238379 GAGE2DQ9UEU5 116 aa9.88□□□□□ -0.83
HDHD3-201ENST00000238379 COX6CP09669 75 aa9.87□□□□□ -0.83
HDHD3-201ENST00000238379 RPL28P46779 137 aaKnown RBP9.87□□□□□ -0.83
HDHD3-201ENST00000238379 NCR3O14931 201 aa9.86□□□□□ -0.83
HDHD3-201ENST00000238379 C14orf177Q52M58 125 aa9.86□□□□□ -0.83
HDHD3-201ENST00000238379 SMIM11BQ8TCY0 68 aa9.86□□□□□ -0.83
HDHD3-201ENST00000238379 CNBPP62633 177 aaKnown RBP9.86□□□□□ -0.83
HDHD3-201ENST00000238379 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
HDHD3-201ENST00000238379 C3orf84H3BNL1 204 aa9.85□□□□□ -0.83
HDHD3-201ENST00000238379 LY6G6CO95867 125 aa9.85□□□□□ -0.83
HDHD3-201ENST00000238379 VPREB1P12018 145 aa9.85□□□□□ -0.83
HDHD3-201ENST00000238379 TRBV10-2A0A0K0K1G8 114 aa9.84□□□□□ -0.83
HDHD3-201ENST00000238379 RPL18AQ02543 176 aaKnown RBP9.84□□□□□ -0.83
HDHD3-201ENST00000238379 LINC00476Q8WZB0 136 aa9.84□□□□□ -0.83
HDHD3-201ENST00000238379 TMEM126AQ9H061 195 aa9.84□□□□□ -0.83
HDHD3-201ENST00000238379 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
HDHD3-201ENST00000238379 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
HDHD3-201ENST00000238379 C21orf62-AS1Q17RA5 79 aa9.82□□□□□ -0.84
HDHD3-201ENST00000238379 PRO0461Q9UI25 63 aa9.82□□□□□ -0.84
HDHD3-201ENST00000238379 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
HDHD3-201ENST00000238379 LOC107984640A0A0U1RRK4 108 aa9.82□□□□□ -0.84
HDHD3-201ENST00000238379 IGLV6-57P01721 117 aa9.82□□□□□ -0.84
HDHD3-201ENST00000238379 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
HDHD3-201ENST00000238379 S100A7L2Q5SY68 101 aa9.82□□□□□ -0.84
HDHD3-201ENST00000238379 F8W1H4 67 aa9.8□□□□□ -0.84
HDHD3-201ENST00000238379 LST1O00453 97 aa9.8□□□□□ -0.84
HDHD3-201ENST00000238379 MTURNQ8N3F0 131 aa9.8□□□□□ -0.84
HDHD3-201ENST00000238379 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
HDHD3-201ENST00000238379 PLA2G2DQ9UNK4 145 aa9.79□□□□□ -0.84
HDHD3-201ENST00000238379 M0R378 163 aa9.79□□□□□ -0.84
HDHD3-201ENST00000238379 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
HDHD3-201ENST00000238379 TRBV10-3A0A0K0K1G6 114 aa9.78□□□□□ -0.84
HDHD3-201ENST00000238379 LINC01620Q4KN68 170 aa9.78□□□□□ -0.84
HDHD3-201ENST00000238379 Q8N814 137 aa9.78□□□□□ -0.84
HDHD3-201ENST00000238379 A0A087WTM6 91 aa9.77□□□□□ -0.84
HDHD3-201ENST00000238379 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.84
HDHD3-201ENST00000238379 FAM218AQ96MZ4 157 aa9.77□□□□□ -0.84
HDHD3-201ENST00000238379 H0YGX0 51 aa9.77□□□□□ -0.85
HDHD3-201ENST00000238379 C1orf134Q5TEV5 83 aa9.77□□□□□ -0.85
HDHD3-201ENST00000238379 C9orf163Q8N9P6 203 aa9.77□□□□□ -0.85
HDHD3-201ENST00000238379 C9JAW5 83 aa9.76□□□□□ -0.85
HDHD3-201ENST00000238379 KRTAP7-1Q8IUC3 87 aa9.76□□□□□ -0.85
HDHD3-201ENST00000238379 A0A096LNI7 61 aa9.75□□□□□ -0.85
HDHD3-201ENST00000238379 FAM168BA1KXE4 195 aa9.75□□□□□ -0.85
HDHD3-201ENST00000238379 IGLV5-37A0A075B6J1 123 aa9.75□□□□□ -0.85
HDHD3-201ENST00000238379 C16orf90A8MZG2 172 aa9.75□□□□□ -0.85
HDHD3-201ENST00000238379 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
HDHD3-201ENST00000238379 SVIPQ8NHG7 77 aa9.75□□□□□ -0.85
HDHD3-201ENST00000238379 KMT2AQ03164 3969 aa9.74□□□□□ -0.85
HDHD3-201ENST00000238379 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
HDHD3-201ENST00000238379 SLC25A20O43772 301 aa9.73□□□□□ -0.85
HDHD3-201ENST00000238379 TRACP01848 142 aa9.73□□□□□ -0.85
HDHD3-201ENST00000238379 TRAV23DV6A0A075B6W5 121 aa9.72□□□□□ -0.85
HDHD3-201ENST00000238379 A0A087WYN8 130 aa9.72□□□□□ -0.85
HDHD3-201ENST00000238379 C7orf33Q8WU49 177 aa9.72□□□□□ -0.85
HDHD3-201ENST00000238379 SDIM1Q6ZPB5 146 aa9.72□□□□□ -0.85
HDHD3-201ENST00000238379 LINC01600Q96MT4 127 aa9.71□□□□□ -0.85
HDHD3-201ENST00000238379 IGKV2-24A0A0C4DH68 120 aa9.7□□□□□ -0.86
HDHD3-201ENST00000238379 M0QXV9 152 aa9.7□□□□□ -0.86
HDHD3-201ENST00000238379 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
HDHD3-201ENST00000238379 ETDBQ3ZM63 59 aa9.7□□□□□ -0.86
HDHD3-201ENST00000238379 FAM19A5Q7Z5A7 132 aaPredicted RBP9.7□□□□□ -0.86
HDHD3-201ENST00000238379 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
HDHD3-201ENST00000238379 ALMS1Q8TCU4 4167 aa9.7□□□□□ -0.86
HDHD3-201ENST00000238379 ANKRD29Q8N6D5 301 aa9.69□□□□□ -0.86
HDHD3-201ENST00000238379 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
HDHD3-201ENST00000238379 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
HDHD3-201ENST00000238379 CBY1Q9Y3M2 126 aa9.68□□□□□ -0.86
HDHD3-201ENST00000238379 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
HDHD3-201ENST00000238379 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
HDHD3-201ENST00000238379 CHTF8P0CG12 524 aa9.68□□□□□ -0.86
HDHD3-201ENST00000238379 KCNQ1DNQ9H478 68 aa9.68□□□□□ -0.86
HDHD3-201ENST00000238379 H3BT86 120 aa9.67□□□□□ -0.86
HDHD3-201ENST00000238379 MRPL55Q7Z7F7 128 aaKnown RBP9.67□□□□□ -0.86
HDHD3-201ENST00000238379 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
HDHD3-201ENST00000238379 DNAH6Q9C0G6 4158 aa9.67□□□□□ -0.86
HDHD3-201ENST00000238379 IGLV1-50A0A075B6I6 118 aa9.66□□□□□ -0.86
HDHD3-201ENST00000238379 A0A1B0GX51 115 aa9.66□□□□□ -0.86
HDHD3-201ENST00000238379 TNP2Q05952 138 aa9.66□□□□□ -0.86
HDHD3-201ENST00000238379 LINC00575Q6W349 94 aa9.66□□□□□ -0.86
HDHD3-201ENST00000238379 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
HDHD3-201ENST00000238379 RTL8CO15255 209 aa9.66□□□□□ -0.86
HDHD3-201ENST00000238379 RPL37AP8A6NKH3 93 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms